Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_004002.1 Length=149955 Score E Sequences producing significant alignments: (Bits) Value seq7 324 1e-83 >seq7 Length=736534 Score = 324 bits (358), Expect = 1e-83 Identities = 603/873 (69%), Gaps = 17/873 (2%) Strand=Plus/Minus Query 13596 ACTCTTTTTTCAAAGAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCAAAT 13655 ||||| ||||| || ||||| |||||||| | || || || || |||||||| || ||| Sbjct 707644 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 707585 Query 13656 GGATTTATT--GACATAAACACTTTATCACAACCTAGTTCTAATAGTAATCTATCAGCAA 13713 |||||| | | | || || |||| |||||||||| | | | |||| |||||| |||| Sbjct 707584 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 707527 Query 13714 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13773 |||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 707526 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 707467 Query 13774 TATTGGTTAAAAATTCTTTTTCTATAGACACAGCCTCTTTTATAATAATTGTAATAATCT 13833 | || || ||| ||||| ||| || || || | || || | | | ||| | Sbjct 707466 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 707407 Query 13834 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13893 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 707406 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 707347 Query 13894 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13953 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 707346 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 707287 Query 13954 ttAACCAAAATATTGCAGCAAATGACCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 14013 | ||||| || || | |||||||| || || ||||| || || ||||| |||||||| | Sbjct 707286 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 707227 Query 14014 CTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATCCATTTTCTAGCCCATTCAG 14073 | | || | ||| ||||| |||| | ||| | | ||||||||| |||||||| | Sbjct 707226 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 707167 Query 14074 AtttttttttAATAAAATCCATTGTTTCAATAGCATTAAATAAATATTC-CTTCTCTTTA 14132 |||| ||| ||| | ||||||||||| ||||| ||||| |||| ||| |||| Sbjct 707166 CCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 707107 Query 14133 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCCATA 14192 | ||| | |||| |||||||| | ||| ||| |||| || || ||||||||||| Sbjct 707106 GATCTTTGA-TGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 707048 Query 14193 GCTATCTGAAAACCATAAAAGCATCTAGCTTCCGACCATTGTACTTC-CGAGTAAAATCT 14251 || || || ||||| || ||| |||| || | ||| || || | | |||| | Sbjct 707047 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-T 706989 Query 14252 TTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14311 || | ||||||||||| |||||||||||| ||| ||||| || || | | || Sbjct 706988 CTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGA 706929 Query 14312 AATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCGGATAAATCCTTAGA 14365 ||| ||| || || |||||| ||| | | || |||||||| ||||| || || Sbjct 706928 AATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGA 706872 Query 14366 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14425 ||||| | ||| || | ||||| ||| || | || || || |||||| ||| || Sbjct 706871 GAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAAT 706812 Query 14426 TTCTTTATATAATATAGGAAAAACTACAAATCT 14458 ||| | ||| || ||||| | ||||| || Sbjct 706811 TTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 479727934037400