Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq7 329 3e-85 >seq7 Length=736534 Score = 329 bits (364), Expect = 3e-85 Identities = 605/874 (69%), Gaps = 17/874 (2%) Strand=Plus/Minus Query 13384 ACTCTTTTTTCAAAAAAGTTAGTTTTACCTTCCAGTGATATATTTTCCATAAAATCGAAT 13443 ||||| ||||| |||||||| |||||||| | || || || || |||||||| |||||| Sbjct 707644 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 707585 Query 13444 GGATTTGTT--GACATAAACACTTTATCACAACCTAGTTCTAATAATAATCTATCAGCAA 13501 |||||||| | | || || |||| |||||||||| | | | | || |||||| |||| Sbjct 707584 GGATTTGTAACGTCGTATAC-CTTT-TCACAACCTAATGCAATCAGTAGTCTATCTGCAA 707527 Query 13502 TAAACTCAATATATTGAGACATTAAATCACAATTCATACCTATTAGTTTTACAGGAATTA 13561 |||||| | ||| ||| |||| ||||| ||||||||| | | || ||||| | Sbjct 707526 CAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGG 707467 Query 13562 TATTAGTTAAAAATTCTTTTTCTATAGACACAGCCTCGTTTATAATAATCTTAATAATGT 13621 | ||| || ||| ||||| ||| || || ||| | || || | | ||| | Sbjct 707466 CGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTT 707407 Query 13622 CATTAGAAGGAGGATATTTTAGATGTTTAAAAATTAAACACGCAAAATCACAATGAAGGC 13681 | || | || || | |||| ||| | ||||| |||||||| ||| | | Sbjct 707406 TTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 707347 Query 13682 CCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCTGGCATCAATCCTCGttttt 13741 | |||||||||| ||| || ||||| || || || || ||||||||||| |||| |||| Sbjct 707346 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 707287 Query 13742 ttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACG 13801 | ||||| || || | || ||||| || || ||||| || || ||||| |||||||| | Sbjct 707286 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 707227 Query 13802 CTATTAGTCGTTCTCCAAACGATGCTTTTTTGTTTGATATCCATTTTCTAGCCCATTCAG 13861 | | | | ||| ||||| |||| | ||| | || ||||||||| |||||||| | Sbjct 707226 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 707167 Query 13862 AtttttttttAATAAAATCCATTGTTTCGATTGCATTGAATAAATGTTC-CTTCTCTTTA 13920 |||| ||| ||| | |||||||| |||||||||||||| ||| ||| |||| Sbjct 707166 CCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTG 707107 Query 13921 GTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATA 13980 | ||| ||||| |||||||| | ||| ||| |||| || || |||||||| || Sbjct 707106 GATCTT-TGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATC 707048 Query 13981 GCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATTGTACCTC-CGAGTAAAATCT 14039 || || || ||||| |||||| |||| |||| ||| || || | | |||| | Sbjct 707047 ATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAAT-T 706989 Query 14040 TTCTGCCAAGTTTTCATTAACAATACCATCACTAGCTGCAAAAAATGCCAATATGTTTTT 14099 || | || |||||||| || ||||||||| ||| ||||| || || | | || Sbjct 706988 CTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGA 706929 Query 14100 AATAAAGTATTGCTCTTCATT---GTTGAGT---TTTTTCCAATCGGCTAAATCCTTAGA 14153 ||| ||| || || |||||| ||| | | || |||||||| ||||| || || Sbjct 706928 AATGAAGAAT--CT-TTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGA 706872 Query 14154 AAGATCTACTTCATCAACTGTCCAAAAACTAGCGACAGCTTTTTTATACATTACCCATAT 14213 ||||| | ||| || | ||||| ||| || | || || || |||||| ||| || Sbjct 706871 GAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAAT 706812 Query 14214 TTCTTTATATAATATAGGAAAAACTACAAATCTT 14247 ||| | ||| || ||||| | ||||| ||| Sbjct 706811 TTCGTGATACTTGATTGGAAAGAGAACAAACCTT 706778 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478588734194040