Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq9 416 4e-111 seq7 284 2e-71 >seq9 Length=441842 Score = 416 bits (460), Expect = 4e-111 Identities = 1358/2098 (65%), Gaps = 43/2098 (2%) Strand=Plus/Minus Query 70837 AGATAGTACATGCCTGTTTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGT 70896 || || ||||| ||||| || || || |||| || || |||||||| ||||| | Sbjct 320744 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 320685 Query 70897 TTGGA-ATAGCTAGGATCGGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGC 70955 || || | | |||| | || || ||||| || || ||||| | | | || Sbjct 320684 TTACCCATTGTT-GGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGC 320626 Query 70956 TCCCCTGTCTGCAGCCATTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA 71015 || || || |||||||| | || || |||||||| | || ||||| | ||| ||||| Sbjct 320625 ACCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATA 320566 Query 71016 -AACTCGCTTAATATCTTCTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCAA 71071 || || ||| || |||| |||| || | || |||||||| || ||| ||||| | Sbjct 320565 TAAGTC-CTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGA 320507 Query 71072 TAATCCTATTTTTGATCTCTTCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGAT 71131 | || ||||| || |||||||| | | | || |||| |||| | | || Sbjct 320506 TGATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATAT 320447 Query 71132 GAGGATTAACTACTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTAT 71191 ||| || || | || ||||| || | || ||||| | || ||||||||| || | Sbjct 320446 AAGGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGT 320387 Query 71192 ACGGTTCCACTGACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTG 71251 | ||||| | | || || | || | |||||||| ||||| ||||||||||| |||| Sbjct 320386 AAGGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTG 320327 Query 71252 CCAC---CAATAGACTATTTCTAAGACCATGTGATCGGATTTTATCTTTTAGAGATTCCC 71308 | || |||| || |||||| | ||||| | |||||| || |||| || |||| Sbjct 320326 CAACAAGCAAT-GA--ATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCC 320270 Query 71309 AATTCCAAAGATCCGATGG--TACAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACT 71366 | | | | | | ||| | || | || | Sbjct 320269 AGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGA--CCTTGGGA 320212 Query 71367 AGCGTATGATCCTGCATATGTATCGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGC 71426 || |||||| || | || || |||||||| || | | || |||| ||| || Sbjct 320211 TGCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGC 320152 Query 71427 CTCTAATGCTCCATAATAAATGGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGG 71486 ||| || || ||| |||||||||||| ||||| | |||| || || | |||||| || Sbjct 320151 CTCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGG 320092 Query 71487 GCTATCAAATGGATAATTT-AAGAGAATAAACGCGTCTGCTAATCCTTGAACGCCAATAC 71545 ||||||||| |||| | || | || || || ||||| || ||||| || |||| | Sbjct 320091 CGAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAG 320033 Query 71546 CGATAGGTCTGTGTCTCTTATTAGAAAT---TTCAGCTTCTGGAATAGGATAATAATTAA 71602 | || ||||||| |||| |||| || | | ||| ||| || |||||| || || Sbjct 320032 CAATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTC 319976 Query 71603 TATCTATAATTTTATTGAGATTTCTGACTATTACTTTGACCACATCCTTTAGTTTGAGAA 71662 |||| || |||||||| | ||| | | || || | || | || || || Sbjct 319975 TATCGATGATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAA 319916 Query 71663 AATCAAATCTCC---------CATCTATT---ACAAACACGTTCAAGGCAACAGATGCCA 71710 | | | | | | |||| || ||||| | ||| |||||| || | Sbjct 319915 AGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTA 319856 Query 71711 GATTACAAACGGCTACCTCATTAGCATCGGCATATTGTATAATTTCAGTGCAAAGATTAC 71770 ||||||||| ||| || | || | ||||| | ||||||| ||| | ||| Sbjct 319855 AATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGG 319796 Query 71771 TACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAA 71830 | | ||||| || ||||||||||||||| || |||||||| ||||||||||| | Sbjct 319795 AAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATA 319736 Query 71831 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAG 71890 || || || |||||||||||| | |||| ||||| |||| | ||| | | | | Sbjct 319735 ACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTG 319676 Query 71891 CCTTTATTATATTCTTGTATCTCTTTTCTCTTTCGTATTGTGTATATAATCGTTCGAACT 71950 | || ||| | || || ||| ||||||||| |||| ||||||||| || ||| | Sbjct 319675 CTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATT 319616 Query 71951 CGTCTCCCCAAGCATTGTCTAATCCAGGACATTCATTCGGACACATCAATGACCACTCTC 72010 | || || | ||| || ||||| |||| | || | | || | ||| ||| Sbjct 319615 CATCACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTT 319556 Query 72011 CATCATCATTTACTCGTTTCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTC 72070 ||| | | |||| || |||||| | |||||||||||| | ||| |||| ||||| Sbjct 319555 CATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTC 319496 Query 72071 TGGTTCTATGCTCCTCGTTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAG 72130 | | |||| || || || || || || | | ||| | || | | |||||| | Sbjct 319495 TTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTG 319436 Query 72131 AATGCCACGGTTCCAAGTATATGGCCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTA 72190 ||||||| || || | |||| || | | || || | ||| || || || || || | Sbjct 319435 AATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAA 319376 Query 72191 TGTATCTAGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCATTGGATGCACCAT 72250 || || || ||||||||| | || || | |||||||||||| |||||||||| ||||| Sbjct 319375 CATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCAT 319316 Query 72251 TGGTCCCGGAGATATAGCTTCCACTGGCACGAATATTGCTAATTGATAGACCTATTCCCC 72310 | || |||| ||||| ||| | | | |||||| || || || || || | Sbjct 319315 TAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCAC 319256 Query 72311 CTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTAT 72370 | || |||| || || || || ||| ||| || ||||||||||| || || || || Sbjct 319255 CAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAAT 319196 Query 72371 CATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAA 72430 | ||| |||| || || ||||| ||||||||| | | ||| |||| ||| | Sbjct 319195 CGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGA 319136 Query 72431 ATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAG 72490 | | || |||||||| || || || | | | |||| | ||| || || |||||| Sbjct 319135 AAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAA 319076 Query 72491 CTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAACATATGCTGAGGTC 72550 | || || ||||| ||| || || || || || | ||||| | ||| || || | Sbjct 319075 CAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCC 319016 Query 72551 TTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAA 72610 |||| | ||||| ||||||| | || | || |||| || ||||| ||||||| Sbjct 319015 TTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAA 318956 Query 72611 AATAGTTGTATGAAAAGTCTCGTTCGTAAATAATAACCGAATTGAGTTTATCCTTATATT 72670 ||||||| || ||||||| || ||| ||| | || | | ||| | || || Sbjct 318955 AATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTT 318896 Query 72671 TGTTAACTATATCCATGGTGATACTTGAAATAATCGGAGAATGTTTCCCATTTTTAGGAT 72730 | | || || ||| || ||||||| || |||| | |||| ||||||||||||| Sbjct 318895 TTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGAT 318836 Query 72731 TAACATAGTTGAATAAATCCTCCATCACTTCACTAAATAGtttttttGTTTCCTTGTGTA 72790 || ||| | ||| | | | |||||| ||| || |||||| ||| |||| Sbjct 318835 CAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTA 318776 Query 72791 GATTTGATACGGCTATTCTGGCGGCTAGAATGGCATAATCTGGATG--TTG-TGTAGTAC 72847 ||||| | || | ||| || || | | |||||||||||||| | | ||| || Sbjct 318775 AGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATAT 318716 Query 72848 AAGTGGCTGCTATTTCTGCTGCCAGAGTGTCCAATTCTACCGTTGTTACTCCATTATA 72905 || || || |||| || || | | | || ||||| || ||||| || |||| ||| Sbjct 318715 AA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 318661 >seq7 Length=736534 Score = 284 bits (314), Expect = 2e-71 Identities = 597/884 (68%), Gaps = 12/884 (1%) Strand=Plus/Minus Query 41774 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTCTTTCCTTCCAATGATATATTT 41833 |||||||| || || | ||||||||||| || || || || | | || || || Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600 Query 41834 TCCATGAAATCAAACGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 41893 ||||| || || || ||||| ||||| | || | |||| | | || ||| || | Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 707540 Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 | ||||||||| | || || | ||| ||||| || |||||| || | | Sbjct 707539 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 707480 Query 41954 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 42012 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 707479 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 707421 Query 42013 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 42072 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 707420 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 707361 Query 42073 ATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 42132 |||| || | ||| |||||||||| ||| | |||||||| ||||| | || ||||| Sbjct 707360 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 707301 Query 42133 TAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTC 42192 | || | |||||| | ||| || || || |||||||| ||||| ||||| || ||||| Sbjct 707300 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 707241 Query 42193 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCACTGTCATGT---ATCCACTT 42249 || || ||||| || | | |||||| || | ||| | || | ||||| || Sbjct 707240 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 707181 Query 42250 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGCATTAAAGAGATA 42309 | ||||| |||||||| | ||| | ||| || || ||||| || ||||| || | | Sbjct 707180 TAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 707121 Query 42310 GtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGACTATACATTTCTGAATG 42369 | |||| || |||||| | || ||||| ||||| | | ||| |||| ||||| Sbjct 707120 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 707061 Query 42370 AATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCGGTAACCTGTACTT- 42428 ||||||||| || || || || || ||||||||| | ||||| | || || || | Sbjct 707060 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 707001 Query 42429 -CTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTGGCTGCAAAAAAC 42487 || | ||| || ||| |||||||||| || ||||| || ||| || ||||| ||| Sbjct 707000 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 706943 Query 42488 GCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAAT---TTATTCCAATCATTG 42544 || | || | || || || |||| | | ||| || |||||||||| Sbjct 706942 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 706883 Query 42545 ATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATGCTTCTGCCTTTTTATAC 42604 | |||||| || | ||| | ||| || | ||||| || |||||||||||||| || ||| Sbjct 706882 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 706823 Query 42605 ATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAATCT 42648 || | ||| || || ||||| | ||||| || | |||||| || Sbjct 706822 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671139107718360