Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq8 114 2e-21 seq1 107 3e-19 >seq8 Length=543103 Score = 114 bits (126), Expect = 2e-21 Identities = 178/253 (70%), Gaps = 1/253 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 ||||| || |||||||||||||||| || ||||||||||| || | | | ||| | Sbjct 63908 AGATC-CTCAGAGATAACATCCAAGGTATTACCAAGCCAGCAATTAGAAGATTAGCTAGA 63966 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| |||||| | |||| | ||| | || ||||| || | | ||| | ||| Sbjct 63967 AGAGGTGGTGTCAAGAGAATCTCGGCTTTGATTTACGAAGAAGTTAGGGCAGTTCTTAAG 64026 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | ||||| | | ||| || ||||| || ||||| || ||||| || | ||| Sbjct 64027 ACTTTCCTTGAAAACGTCATTAGAGATGCAGTCACTTATACTGAACACGCAAAGAGAAAG 64086 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || |||||||| | ||| |||||||||| ||||| | ||||| | | |||||||| Sbjct 64087 ACCGTCACCTCTTTAGATGTCGTCTATGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 64146 Query 16688 TTTGGAAGTTAAT 16700 ||||| ||| || Sbjct 64147 TTTGGTGGTTGAT 64159 >seq1 Length=2559104 Score = 107 bits (118), Expect = 3e-19 Identities = 175/251 (70%), Gaps = 1/251 (0%) Strand=Plus/Plus Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507 ||||| ||| |||||||||||||||| || ||||||||||| ||| | | | ||| | Sbjct 458468 AGATC-CTTAGAGATAACATCCAAGGTATTACCAAGCCAGCAATCAGAAGATTAGCTAGA 458526 Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567 | ||||| || ||| | | || | ||| | || ||||| | | | ||| | ||| Sbjct 458527 AGAGGTGGTGTTAAGAGAATTTCAGCTTTGATTTACGAAGAAGTCAGAGCCGTTCTTAAG 458586 Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627 | |||||| | | |||||| || || || |||||||| ||||| || | ||| Sbjct 458587 ACCTTCCTTGAAAACGTTATTAGAGACGCAGTCACTTATACCGAACACGCAAAGAGAAAG 458646 Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687 || || || || | ||| | |||||||||||||| | ||||| | | |||| ||| Sbjct 458647 ACCGTTACTTCTCTAGATGTTGTCTATGCATTGAAGAGACAAGGTAGAACCCTTTACGGT 458706 Query 16688 TTTGGAAGTTA 16698 ||||| |||| Sbjct 458707 TTTGGTGGTTA 458717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 79075189942623