Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq8 114 2e-21
seq1 107 3e-19
>seq8
Length=543103
Score = 114 bits (126), Expect = 2e-21
Identities = 178/253 (70%), Gaps = 1/253 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| || |||||||||||||||| || ||||||||||| || | | | ||| |
Sbjct 63908 AGATC-CTCAGAGATAACATCCAAGGTATTACCAAGCCAGCAATTAGAAGATTAGCTAGA 63966
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| |||||| | |||| | ||| | || ||||| || | | ||| | |||
Sbjct 63967 AGAGGTGGTGTCAAGAGAATCTCGGCTTTGATTTACGAAGAAGTTAGGGCAGTTCTTAAG 64026
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| ||||| | | ||| || ||||| || ||||| || ||||| || | |||
Sbjct 64027 ACTTTCCTTGAAAACGTCATTAGAGATGCAGTCACTTATACTGAACACGCAAAGAGAAAG 64086
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| |||||||| | ||| |||||||||| ||||| | ||||| | | ||||||||
Sbjct 64087 ACCGTCACCTCTTTAGATGTCGTCTATGCTTTGAAGAGACAAGGTAGAACCCTTTATGGT 64146
Query 16688 TTTGGAAGTTAAT 16700
||||| ||| ||
Sbjct 64147 TTTGGTGGTTGAT 64159
>seq1
Length=2559104
Score = 107 bits (118), Expect = 3e-19
Identities = 175/251 (70%), Gaps = 1/251 (0%)
Strand=Plus/Plus
Query 16448 AGATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGT 16507
||||| ||| |||||||||||||||| || ||||||||||| ||| | | | ||| |
Sbjct 458468 AGATC-CTTAGAGATAACATCCAAGGTATTACCAAGCCAGCAATCAGAAGATTAGCTAGA 458526
Query 16508 CGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAG 16567
| ||||| || ||| | | || | ||| | || ||||| | | | ||| | |||
Sbjct 458527 AGAGGTGGTGTTAAGAGAATTTCAGCTTTGATTTACGAAGAAGTCAGAGCCGTTCTTAAG 458586
Query 16568 ATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAG 16627
| |||||| | | |||||| || || || |||||||| ||||| || | |||
Sbjct 458587 ACCTTCCTTGAAAACGTTATTAGAGACGCAGTCACTTATACCGAACACGCAAAGAGAAAG 458646
Query 16628 ACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGT 16687
|| || || || | ||| | |||||||||||||| | ||||| | | |||| |||
Sbjct 458647 ACCGTTACTTCTCTAGATGTTGTCTATGCATTGAAGAGACAAGGTAGAACCCTTTACGGT 458706
Query 16688 TTTGGAAGTTA 16698
||||| ||||
Sbjct 458707 TTTGGTGGTTA 458717
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79075189942623
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |