Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_006966.1 Length=166259 Score E Sequences producing significant alignments: (Bits) Value seq7 260 1e-64 >seq7 Length=736534 Score = 260 bits (288), Expect = 1e-64 Identities = 602/900 (67%), Gaps = 17/900 (2%) Strand=Plus/Minus Query 21200 ACTCTTTTTTCGAAAAAATTTGTCTTTCCTTCCAATGATATAGATTCCATAAAATCAAAT 21259 ||||| ||||||||||| ||||| || || | | || || |||||||| || ||| Sbjct 707644 ACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAAT 707585 Query 21260 GGATTTTCAGATTTAAATATTTTATTACAACCCAGTTCTGATAATAATCTATCTGCTACA 21319 |||||| | | ||| || | |||||| | | | | || ||||||||| ||| Sbjct 707584 GGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGTAGTCTATCTGCAACA 707525 Query 21320 AATTCTATATATTGACACATTAATTCACAATTCATACCGATCAATTTTACAGGAAGAGCT 21379 || || | ||| |||||||| || || ||||||||||| ||| || ||||| || || Sbjct 707524 AACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCG 707465 Query 21380 TTTGTCAAAAAAGATTTTTCTATAGAGACGGCTTCAACAATTATATTTATTATCCTAGAT 21439 | || || | ||||| ||| |||||||| ||| || | | | | | | Sbjct 707464 TCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTT 707405 Query 21440 --GTACTAGGGGGATACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAAC 21497 || || |||| || || ||| ||| | |||||| |||||||| ||| |||| Sbjct 707404 TCGT-CT-GGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAAC 707347 Query 21498 CTTCATCCCTACTTATTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTT 21557 ||||||| |||| || | || || || || || ||||| ||||| || |||||||||| Sbjct 707346 CTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTT 707287 Query 21558 TTAACCAAAATATTGACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATG 21617 | ||||| || || || ||||||| || || |||||||| || ||||| |||||||||| Sbjct 707286 TCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATG 707227 Query 21618 CAACTAATCGTTCACCGTATGTAGATTCTTTATCCAATATCCATTTTTCTGCCCATTTTG 21677 | || || | || | | | |||||||| ||||||||| ||||||| | Sbjct 707226 CCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGG 707167 Query 21678 CCTTTTCTTTAATACAATCAATTGTATCAATAGCTTTTAA-AAGATGAtt-tttttCATC 21735 |||||||||| ||||| ||||| ||||| || || || |||| ||| |||| | Sbjct 707166 CCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGA--ATTCACTTTCCTT 707109 Query 21736 TACATCGGTTATGNNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTAT 21795 | ||| | ||| | ||| |||| ||||| || ||||| || Sbjct 707108 TGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCAT 707049 Query 21796 CGCTATCTGAAATCCGTAAAAACATCTTGCCTCTGAACATTGAAC--CTCGGAATAAAAT 21853 | || || || || || |||||| | ||||||| | |||||| | | | ||| | Sbjct 707048 CATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATT 706989 Query 21854 CGTTGAGCCAAGTTTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTT 21913 | | | | || |||||||| ||||| |||||| || ||||| || || | | || Sbjct 706988 C--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTT 706931 Query 21914 TTTATAAAATATCGTTCGTTATCTGTTAAT---TTTTTCCAATCTAATAAATCTTTTGAT 21970 || || ||| ||| || || | ||| || |||||||| |||||||| || Sbjct 706930 GAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAG 706871 Query 21971 AAATCTACTTCTTCAGTTGTCCA-AAAGCTAGCAATAGCCTTTTTATACATAATCCAGAT 22029 | ||| | ||| || | ||||| |||| | || ||||| || ||||| ||| || Sbjct 706870 AGATCAATTTCCTCCGCAGTCCAGAAAGAT-GCTTCTGCCTTCTTGTACATTTGCCAAAT 706812 Query 22030 ATCATTATATATTATTGGAAATATTACAAACCTGTTATTTGATTCAACTAAAAGTGGTTC 22089 || | ||| | |||||||| | |||||||| | || ||| |||||||||||| Sbjct 706811 TTCGTGATACTTGATTGGAAAGAGAACAAACCTTCTCTTGTTTTCCTTTAAAAGTGGTTC 706752 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531900726863640