Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_007346.1
Length=407339
Score E
Sequences producing significant alignments: (Bits) Value
seq7 187 6e-42
seq9 174 4e-38
>seq7
Length=736534
Score = 187 bits (206), Expect = 6e-42
Identities = 495/748 (66%), Gaps = 20/748 (3%)
Strand=Plus/Plus
Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273
||||||| ||||||||| | | || |||||||| ||| ||| |||| |||||
Sbjct 706936 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 706995
Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333
|| ||| ||||| |||||||| | |||||||||||| | ||||| ||||| ||||
Sbjct 706996 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 707055
Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393
| |||| ||||||| |||||| | || | | | | | ||||| | | |||
Sbjct 707056 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 707114
Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452
| ||| ||||||| || ||| || || | || || || | ||||| || |||
Sbjct 707115 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAAGAAAAGGCCGAATGG 707174
Query 22453 GCGCTGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTGCT 22509
|| | |||||||| || || | |||| || || | | | |||||||||
Sbjct 707175 GCCTTAAAATGGATTGCAGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCT 707234
Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569
| |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| |
Sbjct 707235 GCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGA 707294
Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629
| | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | |||
Sbjct 707295 GGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACAT 707354
Query 22630 ACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATG---AA 22686
||||||||||| ||| |||| | | ||| | | |||| ||| | | ||
Sbjct 707355 ACCGATTTTGCTTGTTTGCTCTTT---TCACATTTGAACCATA---CCCCAGACGAAAAA 707408
Query 22687 ACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCG 22746
| ||| | || ||||| | || ||||| ||||| || | || ||
Sbjct 707409 ATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGCC 707468
Query 22747 TTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTT 22806
|||| || | | | ||||| ||| || | ||| || ||| | | ||||||
Sbjct 707469 CTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTT 707528
Query 22807 GCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTT---AATCCA 22863
|||||| | ||| | ||| || | |||| || |||| ||| ||| |||| ||||||
Sbjct 707529 GCAGATAGACTACTGATTGCATTAGGTTGTGAAAAG--GTAT-ACGACGTTACAAATCCA 707585
Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923
|| || | ||||| ||||| |||| || || || || || |||||||| |||||
Sbjct 707586 TTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGTC 707645
Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGG 22951
|| |||||||| |||||||| ||||
Sbjct 707646 TCCGACTACCAAAAGGCAGGTGTCATGG 707673
>seq9
Length=441842
Score = 174 bits (192), Expect = 4e-38
Identities = 722/1120 (64%), Gaps = 38/1120 (3%)
Strand=Plus/Plus
Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150
||| | |||||||||||||||||||| | |||| ||| | || | |||||||| ||
Sbjct 318655 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 318714
Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210
||| |||| | | ||||| ||||| | | |||||||| | ||||| ||||
Sbjct 318715 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 318774
Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270
| || || ||| | || || || || || | || || |||| ||| |
Sbjct 318775 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 318834
Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330
|| | || | ||||| | ||| | ||| | | || | | ||| | |||
Sbjct 318835 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 318894
Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389
|||||| | | || ||||| | || ||||||| | || || | ||| | |||
Sbjct 318895 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 318954
Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449
||| || | || || | || | || || | | || |||||| | |||| ||
Sbjct 318955 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCCGA 319013
Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509
| | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| |
Sbjct 319014 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 319073
Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565
| |||||||| ||||| | || ||| | || | ||||| || || | ||||
Sbjct 319074 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 319129
Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621
| | | |||| | || |||| | |||| | |||||||| || |||||| | |
Sbjct 319130 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 319185
Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681
||||||||||||||||| || ||||||| ||| || | || | |||||| | ||||||
Sbjct 319186 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 319245
Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737
|| | ||| || || ||||| || || || ||| || | | ||| | |||
Sbjct 319246 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 319301
Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796
||| ||| || | || | | || |||||| | |||| ||| || | || ||| | |
Sbjct 319302 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 319360
Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854
| ||||| ||||| || ||||| ||||| | |||| | || |||||||| | ||
Sbjct 319361 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 319418
Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914
| | |||||| ||| | |||||| |||| ||| |||| || |||||||| || ||
Sbjct 319419 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAA 319478
Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974
||| ||| | | ||| | ||| | ||| ||| | ||| || |||| |||||| |
Sbjct 319479 AGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGA 319538
Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034
| || ||| | | | ||||| | |||| | ||| ||| || ||| |
Sbjct 319539 AAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAG 319598
Query 364035 CGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATG-AATCGGAGGGAAA 364091
||||||| ||||| || | | | ||||| ||| |||| || | ||| | |
Sbjct 319599 TGATGTATATGGTGATGAATTCAAAGAATTATATACCAAA--TATGAAAGAGAAGGTAGA 319656
Query 364092 GGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151
||| | | |||||| ||||| ||| |||||| | | ||| | || | || | |||
Sbjct 319657 GGC-AGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGA 319715
Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191
|| || ||||| | ||||| || || ||| | || |||
Sbjct 319716 AACTGGTACACCTTTCATGTTATATAAGGATGCATGTAAC 319755
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1303353416308602
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |