Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq7 187 6e-42 seq9 174 4e-38 >seq7 Length=736534 Score = 187 bits (206), Expect = 6e-42 Identities = 495/748 (66%), Gaps = 20/748 (3%) Strand=Plus/Plus Query 22214 TTCTAGCATTCTTTGCTACCGCAGACGGTATAGTTTTTGAGAATCTAGTGACTAATTTTG 22273 ||||||| ||||||||| | | || |||||||| ||| ||| |||| ||||| Sbjct 706936 TTCTAGCGTTCTTTGCTGCTTCTGATGGTATAGTCAATGAAAATTTAGTTGAGAATTTCT 706995 Query 22274 CATCTGAAATTCAATACCCAGAGGCCAGATGTTTCTATGGTGTGCAAATGATGATTGAAA 22333 || ||| ||||| |||||||| | |||||||||||| | ||||| ||||| |||| Sbjct 706996 CAAGTGATGTTCAAATTCCAGAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAA 707055 Query 22334 ATGTTCACGCGGAAACATATTCTATGATGCTACAGTCACTCGTAGAAGATAAAGACGAAC 22393 | |||| ||||||| |||||| | || | | | | | ||||| | | ||| Sbjct 707056 ACATTCATTCGGAAACTTATTCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAA- 707114 Query 22394 AACGAAA-CTTATTCCGCGCGATTCGCACCATTCAATCAATTAAGAATAAGGCAGATTGG 22452 | ||| ||||||| || ||| || || | || || || | ||||| || ||| Sbjct 707115 AGTGAATTCTTATTCAATGCAATTGAAACAATCCCATGTATCAAAGAAAAGGCCGAATGG 707174 Query 22453 GCGCTGAAATGGATGAACAATGAACGTTCATTC---GCGGAACGTCTTATTGCATTTGCT 22509 || | |||||||| || || | |||| || || | | | ||||||||| Sbjct 707175 GCCTTAAAATGGATTGCAGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCT 707234 Query 22510 GTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTaaaaaaaCGT 22569 | |||||||| |||||||| ||||| ||||| | ||||| ||| | ||||| | Sbjct 707235 GCTGTTGAAGGTATTTTCTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGA 707294 Query 22570 GCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGAGGGTCTTCAT 22629 | | ||||| ||| | ||||| || || ||| | ||| | ||||||| ||| | ||| Sbjct 707295 GGTTTGATGCCAGGTTTGACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACAT 707354 Query 22630 ACCGATTTTGCGTGTATGCTATATCGGAATCATATCATTCATAAACTTCCATATG---AA 22686 ||||||||||| ||| |||| | | ||| | | |||| ||| | | || Sbjct 707355 ACCGATTTTGCTTGTTTGCTCTTT---TCACATTTGAACCATA---CCCCAGACGAAAAA 707408 Query 22687 ACTGTACTTGATATTATTACAAATGCAGTTGAACTTGAACGTCTATTTATTTGCGAGGCG 22746 | ||| | || ||||| | || ||||| ||||| || | || || Sbjct 707409 ATTGTCAGACAAATCATTACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGCC 707468 Query 22747 TTACCAGTAAGTCTCATTGGTATCAATGCCGAATCAATGAGTACATATATTAAATTTGTT 22806 |||| || | | | ||||| ||| || | ||| || ||| | | |||||| Sbjct 707469 CTACCTGTCAACTTGCTCGGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTT 707528 Query 22807 GCAGATCGTCTATTAATTTCACTCGGTTATGCAAAGCATTATAACGTCGTT---AATCCA 22863 |||||| | ||| | ||| || | |||| || |||| ||| ||| |||| |||||| Sbjct 707529 GCAGATAGACTACTGATTGCATTAGGTTGTGAAAAG--GTAT-ACGACGTTACAAATCCA 707585 Query 22864 TTTGAATGGATGGAACTTATTTCACTTGAAGGAAAGACCAATTTCTTCGAAAAAAGAGTT 22923 || || | ||||| ||||| |||| || || || || || |||||||| ||||| Sbjct 707586 TTCGACTTTATGGAGAACATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGTC 707645 Query 22924 GGTGAATACCAAAAAGCAGGTGTTATGG 22951 || |||||||| |||||||| |||| Sbjct 707646 TCCGACTACCAAAAGGCAGGTGTCATGG 707673 >seq9 Length=441842 Score = 174 bits (192), Expect = 4e-38 Identities = 722/1120 (64%), Gaps = 38/1120 (3%) Strand=Plus/Plus Query 363091 GGTCTATATGATGGTGTTACAACTGTTCAGCTAGACAATCTTGCCGTAGAAACTGCAACT 363150 ||| | |||||||||||||||||||| | |||| ||| | || | |||||||| || Sbjct 318655 GGTGTTTATGATGGTGTTACAACTGTCGAATTAGATAATTTAGCTGCTGAAACTGCTGCT 318714 Query 363151 TATCTGACCATGACGCATCCTGATTACTCCAAACTGGCTGCTCGCATTGCAGTTTCGTCT 363210 ||| |||| | | ||||| ||||| | | |||||||| | ||||| |||| Sbjct 318715 TATATGACAACTATCCATCCAGATTATGCGGTATTGGCTGCTAGAGTTGCAATTTCAAAC 318774 Query 363211 CTTCATAAAATGACATCAAATAAGTTTTCCAGTGTCATGGATAGTCTGTATAACTATGTC 363270 | || || ||| | || || || || || | || || |||| ||| | Sbjct 318775 TTACAAAAGCAAACAACTAAGAAATTCTCTGAAGTTGTTAATCAACTATATACTTATATT 318834 Query 363271 AATACAAAGACCGGTAAGTGGTCACCACTCATTGCCGATGACATTATTGAATGTATCCGT 363330 || | || | ||||| | ||| | ||| | | || | | ||| | ||| Sbjct 318835 GATCCTAAAAATGGTAAACCTGCTCCAATGATTTCAAAGGAGACTTGGGAAATTGTCCAA 318894 Query 363331 TCTAATGCGGAAGTTTTCGATGACGTTATCAATTATGAGAAGGATCTCGAGTATGA-TAT 363389 |||||| | | || ||||| | || ||||||| | || || | ||| | ||| Sbjct 318895 AAAAATGCGAATATATTAGATGATGCAATTCATTATGATAGAGACTTCAATTATAACTAT 318954 Query 363390 TTTCGGATATAAGACGATGGAGAAATCCTACCTATCTCGTATCAATGGTGATATTGTTGA 363449 ||| || | || || | || | || || | | || |||||| | |||| || Sbjct 318955 TTT-GGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTGCCGA 319013 Query 363450 ACGCCCGCAGCATATGTTAATGCGTGTTGCTATTGGTATCCATTGCCCGGATGTTGATGC 363509 | | || || ||| | ||||| | ||||| ||||||| ||| | ||| ||||| | Sbjct 319014 AAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTGATTC 319073 Query 363510 CGCGATTGAAACATATAAGCT----TCTAAGTGCTCGTGTATTCACGCACGCCACGCCAA 363565 | |||||||| ||||| | || ||| | || | ||||| || || | |||| Sbjct 319074 TGTTATTGAAACTTATAATTTGATGTCAAAGAG---GTAT-TTCACACATGCTTCTCCAA 319129 Query 363566 CAATGTACAATGCTGGAACTC---GTAATCCACAGATGTCTTCTTGCTTTCTTC-TAAAA 363621 | | | |||| | || |||| | |||| | |||||||| || |||||| | | Sbjct 319130 CTCTTTTCAATTCGGGTACTCCAAGAAATCAA---ATGTCTTCATG-TTTCTTAGTTGCA 319185 Query 363622 ATGAAGGACGATTCCATCGAGGGTATCTTTGACACACTTAAGAATTGTGCTCTTATTTCC 363681 ||||||||||||||||| || ||||||| ||| || | || | |||||| | |||||| Sbjct 319186 ATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTTCC 319245 Query 363682 AAGAATGCAGGCGGAATTGGTGTATCGATCCACAATGTTCGTGCACAGAACAG----TTA 363737 || | ||| || || ||||| || || || ||| || | | ||| | ||| Sbjct 319246 AAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATC----AACTGGTTCTTA 319301 Query 363738 CATTCGCGGCAC-AGGGGGATACTCGAATGGGCTGGTTCCCATGCTTCGTGTGTTTGACA 363796 ||| ||| || | || | | || |||||| | |||| ||| || | || ||| | | Sbjct 319302 TATTGCCGGTACTAATGGTACA-TCCAATGGGATTATTCCAATGATTAGGGTCTTTAATA 319360 Query 363797 ATACTGCGAGGTACGTCGACCAGGGTGG--AGGAAAGCGCAAAGGGGCGTTTGCTATGTA 363854 | ||||| ||||| || ||||| ||||| | |||| | || |||||||| | || Sbjct 319361 ACACTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACC--TGGTGCGTTTGCACTATA 319418 Query 363855 TCTCGAGCCTCATCATGCCGATATTTTTGAGTTTCTTGAGCTCCGGAAAAACACGGGAAA 363914 | | |||||| ||| | |||||| |||| ||| |||| || |||||||| || || Sbjct 319419 TATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAA 319478 Query 363915 AGAGGAATTGCGTGCACGTGATCTGTTCTATGCACTTTGGGTTTCTGACCATTTTATGAA 363974 ||| ||| | | ||| | ||| | ||| ||| | ||| || |||| |||||| | Sbjct 319479 AGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGA 319538 Query 363975 GCGCGTGGAGGCAGGTAAGAATTGGTCACTCTTTTGCCCACACGAATGTCCAGGTCTTTC 364034 | || ||| | | | ||||| | |||| | ||| ||| || ||| | Sbjct 319539 AAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAG 319598 Query 364035 CGATGTATGGGGTGACGACT--ATGTTGCTCTATACGAAAAGTATG-AATCGGAGGGAAA 364091 ||||||| ||||| || | | | ||||| ||| |||| || | ||| | | Sbjct 319599 TGATGTATATGGTGATGAATTCAAAGAATTATATACCAAA--TATGAAAGAGAAGGTAGA 319656 Query 364092 GGCTCGTAAGACAATTCCCGCACAGAAGCTATGGTTTGCCATCATGGATTCGCAGATTGA 364151 ||| | | |||||| ||||| ||| |||||| | | ||| | || | || | ||| Sbjct 319657 GGC-AGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGA 319715 Query 364152 GACAGGAACACCCTATATGTTGTACAAAGATTCGTGCAAC 364191 || || ||||| | ||||| || || ||| | || ||| Sbjct 319716 AACTGGTACACCTTTCATGTTATATAAGGATGCATGTAAC 319755 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303353416308602