Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_008035.3 Length=126629 Score E Sequences producing significant alignments: (Bits) Value seq4 98.7 8e-16 >seq4 Length=1293945 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 16709 CCTCCTCGTAGCCTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCC 16768 || |||| || |||| |||| || ||||| |||||||| || ||||||||||| | Sbjct 737883 CCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 737942 Query 16769 ATGGTTTTGGCGTCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGC 16828 | || | ||||||| | |||||| || || ||||||| | ||| ||||| || Sbjct 737943 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738002 Query 16829 ACGCCCTCTTTGTCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTT 16888 | ||||| ||||| || | | ||| || | | | | |||||| | |||| Sbjct 738003 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGACGACTCCACC 738062 Query 16889 TCCACGGTGATGGTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 |||| ||||| ||||| || || || || |||||||| |||||||| Sbjct 738063 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || ||||| |||||||| || ||||||||||| | | || | || Sbjct 738350 CTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCG 738409 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||| | |||||| || || ||||||| | ||| ||||| || | ||||| ||| Sbjct 738410 TCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTG 738469 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | | ||| || | | | |||||| | |||| |||| ||||| Sbjct 738470 TCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATT 738529 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || |||||||| |||||||| Sbjct 738530 GTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || ||||| |||||||| || ||||||||||| | | || | || Sbjct 738578 CTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCG 738637 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||| | |||||| || || ||||||| | ||| ||||| || | ||||| ||| Sbjct 738638 TCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTG 738697 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | | ||| || | | | |||||| | |||| |||| ||||| Sbjct 738698 TCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATT 738757 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || |||||||| |||||||| Sbjct 738758 GTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || ||||| |||||||| || ||||||||||| | | || | || Sbjct 738806 CTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCG 738865 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||| | |||||| || || ||||||| | ||| ||||| || | ||||| ||| Sbjct 738866 TCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTG 738925 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | | ||| || | | | |||||| | |||| |||| ||||| Sbjct 738926 TCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATT 738985 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || |||||||| |||||||| Sbjct 738986 GTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || ||||| |||||||| || ||||||||||| | | || | || Sbjct 739034 CTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCG 739093 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||| | |||||| || || ||||||| | ||| ||||| || | ||||| ||| Sbjct 739094 TCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTG 739153 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | | ||| || | | | |||||| | |||| |||| ||||| Sbjct 739154 TCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATT 739213 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || |||||||| |||||||| Sbjct 739214 GTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248 Score = 87.8 bits (96), Expect = 1e-12 Identities = 149/215 (69%), Gaps = 1/215 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || ||||| |||||||| || ||||||||||| | | || | || Sbjct 738123 CTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCG 738182 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||| | |||||| || || ||||||| | ||| ||||| || | ||||| ||| Sbjct 738183 TCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTG 738242 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | | ||| || | | | |||||| | |||| |||| ||||| Sbjct 738243 TCCTGGATCTTCGACTTGACAT-TTCAATGGTGTCGGATGACTCCACCTCCAATGTGATT 738301 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCAT 16935 ||||| || || || || |||||||| |||||||| Sbjct 738302 GTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738336 Score = 86.0 bits (94), Expect = 5e-12 Identities = 150/217 (69%), Gaps = 1/217 (0%) Strand=Plus/Plus Query 16721 CTCAGTACCATATGCAGCGTGGACTCCTTTTGTATGTTGTAGTCGGCCATGGTTTTGGCG 16780 |||| |||| || ||||| |||||||| || ||||||||||| | | || | || Sbjct 739462 CTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCG 739521 Query 16781 TCCTCCAATTGTTTGCCCGCATAAATAAGCCGCTGTTGGTCCACAGGCACGCCCTCTTTG 16840 ||||| | |||||| || || ||||||| | || ||||| || | ||||| ||| Sbjct 739522 TCCTCTAGTTGTTTACCAGCGAAAATAAGTC-TTGCTGGTCTGGTGGAATACCCTCCTTG 739580 Query 16841 TCGGCAATTTGCTGCTTCACCTGGCCCACAGTGTCGCCGGGCTCCGTTTCCACGGTGATG 16900 || || | | ||| || | | | |||||| | |||| |||| ||||| Sbjct 739581 TCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATT 739640 Query 16901 GTTTTTCCGGTCAGCGTTTTGACAAAAATCTGCATTT 16937 ||||| || || || || |||||||| |||||||||| Sbjct 739641 GTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATTT 739677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 405087945692890