Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq9 416 4e-111 seq7 338 8e-88 >seq9 Length=441842 Score = 416 bits (460), Expect = 4e-111 Identities = 1386/2139 (65%), Gaps = 39/2139 (2%) Strand=Plus/Minus Query 61843 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 61902 ||| | |||||||||||| | || | || | | || | || || ||||| || || Sbjct 320787 GTCAACTGTGAATTGAATTGCCGCAGCAGCAGCCTGGGTTCTAAGGTAATACATACCTGT 320728 Query 61903 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGATC 61962 || || || |||| || || |||||||| ||||| ||| | |||| Sbjct 320727 CTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAATTTACCCATTGTTGGATT 320668 Query 61963 TGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 62022 | | |||||| ||||||||||| ||||| | | | || || || || |||||||| Sbjct 320667 TTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCACCTCTATCAGCAGCCAT 320608 Query 62023 TTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 62081 | ||||| |||||||| | || ||||| | ||| ||||| || || ||| || |||| Sbjct 320607 ATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATATAAGTC-CTTGATCTCTT 320549 Query 62082 CTGGAAGGTTTG-TA--TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCT 62138 |||| || | || |||||||| || ||| ||||| || || || || || Sbjct 320548 GAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATGATATGGTTTTTCATAG 320489 Query 62139 CATCATTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAA 62198 ||||||||| | | | || |||| |||| | | || || || || | || | Sbjct 320488 AATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAAGGGTTGACAATCTGGA 320429 Query 62199 ATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCAT 62258 |||| || | || ||||| | || ||||||||| || || ||||| | | || | Sbjct 320428 ATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAAGGTTCAAAGCATTCGT 320369 Query 62259 TATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTC 62318 | | || | |||||||| ||||| ||||||||||| ||||| || | || ||||| Sbjct 320368 TGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAACAAGCAATGAATTTC 320309 Query 62319 TAAGACCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG-- 62376 | | ||| | | ||||||| || |||| | ||||| | | | | | || Sbjct 320308 TCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCATATAAGTTGGTTGGCT 320249 Query 62377 TACAACNNNNNNNNNNNNNNNTTGTAGAATACCGTTACTGGCGTACGATCCTACATATGT 62436 | || ||||| | ||| | || |||||| || | || Sbjct 320248 TCTTACCCCAAAGATCAAAC--TGTAGGAGACCTTGGGATGCAGGAGATCCTTCAAAAGT 320191 Query 62437 ATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAAT 62496 || |||||||| ||| | || || |||| ||| ||||| || ||| | | |||||| Sbjct 320190 CTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAAGCAGCATGATAAAT 320131 Query 62497 GGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTT-A 62555 |||||| || || | |||| || || | ||||| | ||||||||| |||| | | Sbjct 320130 GGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCAAATGG-TAATCTCA 320072 Query 62556 AGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTAT 62615 | | || || || ||||| || ||||| ||||||| | | || ||||| | |||| ||| Sbjct 320071 ACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGGTCTGTTTCTCATAT 320012 Query 62616 TAGAGAT---TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGAT 62672 | || | | ||| ||| || |||||| || || |||| || |||||||| | | Sbjct 320011 TTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGATGATTTTATTCAAGT 319955 Query 62673 TTCT-GACAATTACTTTG--ACCACATC---CTTC----AGTTTGAGAAAATCAAATCGC 62722 || | | || ||||| | ||| |||| |||| | || || || Sbjct 319954 TTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCAA--CAGTTCTT 319897 Query 62723 C-CATCTATTACAA-ACATGTT--CAATGCAACAGATGCCAGATTACAAACGGCTACCTC 62778 |||| || ||| | ||| |||||||||| || | ||||||||| ||| || Sbjct 319896 GTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACAAACTGCTGTTTC 319837 Query 62779 ATTAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAA 62838 | || | ||||| | || ||| ||| | ||| | | ||||| || || Sbjct 319836 CTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAA 319777 Query 62839 ATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGT 62898 ||||||||||||| || |||||||| ||||||||||| | ||||| || |||||||| Sbjct 319776 ATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGT 319717 Query 62899 TTCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTA 62958 |||| | |||| ||||| |||| | ||| | | | || || ||| | || Sbjct 319716 TTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCC 319657 Query 62959 TCTCTTTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTC 63018 ||| ||||||||| ||| ||||| ||| || ||| || || || | |||| Sbjct 319656 TCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACT 319597 Query 63019 CAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 63078 || ||||| |||| || | | || | ||| ||| | | | || |||| || Sbjct 319596 CAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTC 319537 Query 63079 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 63138 |||||| | |||||||||||| | ||| |||| |||||| | |||| ||| || || Sbjct 319536 CATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTT 319477 Query 63139 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 63198 || || || | | ||| | || | | |||||| |||||||| || || | || Sbjct 319476 ACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATA 319417 Query 63199 TATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 63258 || || | | ||||| | ||| || || || || || | || || || |||||||| Sbjct 319416 TAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATT 319357 Query 63259 ATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGCT 63318 | | || || | |||||||||||| ||||||||||||||||| || || | ||||| Sbjct 319356 AAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGA 319297 Query 63319 TCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAA 63378 ||| | | | ||||||| || || || || || || || |||| || || || Sbjct 319296 ACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAA 319237 Query 63379 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 63438 || ||| ||| || ||||||||||| || || || ||| ||| |||| || || Sbjct 319236 AGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAA 319177 Query 63439 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 63498 ||||| ||||||||| | | ||| |||| ||| || | || |||||||| || Sbjct 319176 GAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATG 319117 Query 63499 AGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATTG 63558 || || | | | || | | ||| || || |||||| | || || ||||| Sbjct 319116 TGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAATCAATATCATCACC 319057 Query 63559 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 63618 |||||| || || || || | ||||| | || || || ||||| | ||||| || Sbjct 319056 ATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCGGCAATCTTACCATT 318997 Query 63619 TATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 63678 |||| | || | || |||| || ||||| |||||||||||||| || ||||| Sbjct 318996 TATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAACCAAAATAGTTATAATTGAAGTC 318937 Query 63679 TCGTTCGTAAATAATAACCGAGTTGAGTTTATCCTTATATTTGTTAACTACATCCATGGT 63738 || || ||| ||| | | | | ||| | || ||| | || | ||| || Sbjct 318936 TCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTTGGACAATTTCCCAAGT 318877 Query 63739 AATACTTGAAATAATAGGAAAATGTTTCCCATTTTTAGGATTGACATAGTTGAATAAATC 63798 ||||||| || ||| | |||| ||||||||||||| | ||| | ||| | Sbjct 318876 CTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCAATATAAGTATATAGTTG 318817 Query 63799 CTCCATCACTTCACTAAATAGtttttttGTTTCTTTGTGTAGATTTGATACGGCTATTCT 63858 | | |||||| ||| || |||||| || |||| ||||| | || | ||| Sbjct 318816 ATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAGTTTGAAATTGCAACTCT 318757 Query 63859 AGCGGCTAGAATGGCATAATCCGGATG--TTG-TGTAGTACAAGTGGCTGCTATTTCGGC 63915 ||| || | | |||||||| ||||| | | ||| || || || || |||| || Sbjct 318756 AGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCATATAA---GCAGCAGTTTCAGC 318700 Query 63916 TGCCAGAGTGTCCAATTCTACCGTTGTTACACCATTATA 63954 || | | | || ||||| || ||||| ||||||| ||| Sbjct 318699 AGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 318661 >seq7 Length=736534 Score = 338 bits (374), Expect = 8e-88 Identities = 609/884 (69%), Gaps = 12/884 (1%) Strand=Plus/Minus Query 32370 TTTTGGTATTCACCCACACGTTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTT 32429 |||||||| || || | ||||||||||| || |||||||| | | || || || Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600 Query 32430 TCCATGAAATCGAATGGATTGGTAACATTATAAAtttttttAAATCCCAATTCAGAAATC 32489 ||||| || ||||||||||| ||||| | || | |||| | | || ||| || | Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGCAATCAGT 707540 Query 32490 AATCTATCTGCGACAAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 32549 | ||||||||| ||||| || | ||| ||||| || |||||| || | | Sbjct 707539 AGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAG 707480 Query 32550 TTAACTGGAAGAGCCACAGT-AAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAAT 32608 || || || || || |||| ||| | ||||| ||||||| || || || || || || Sbjct 707479 TTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGAT 707421 Query 32609 AGATCTTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGCGAA 32668 ||| || ||| ||| || | || |||||| ||| | |||||| || || Sbjct 707420 TTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAA 707361 Query 32669 ATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCAT 32728 |||| |||| ||| || ||||||| ||| | |||||||| ||||| | || ||||| Sbjct 707360 ATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCAT 707301 Query 32729 TAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTC 32788 | || | |||||| | ||| || ||||| |||||||| ||||| |||||||| ||||| Sbjct 707300 CAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTC 707241 Query 32789 TACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCGCTGTCATGT---ATCCACTT 32845 || || ||||| || | | |||||| || | || | || | ||||| || Sbjct 707240 AACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTT 707181 Query 32846 TTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 | ||||| |||||||| | ||| | ||| || ||||| || || ||||| || | | Sbjct 707180 TAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAA 707121 Query 32906 GtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATG 32965 | |||| || |||||| | || ||||||||||| | | ||| |||||||||| Sbjct 707120 TTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATG 707061 Query 32966 AATGTTTTCAATGGCCATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTC 33025 ||||||||| || ||||| || || ||||| ||| ||||||| | ||| || || || Sbjct 707060 AATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATC 707001 Query 33026 TGT--ACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAAC 33083 | | ||| || || ||||||||||||| ||||| || ||| || ||||| ||| Sbjct 707000 ACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAAC 706943 Query 33084 GCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTTAGT---TTATTCCAATCATTG 33140 || | || | || || || |||| | | | | | || |||||||||| Sbjct 706942 GCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGC 706883 Query 33141 ATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATAC 33200 | |||||| || | ||| | ||| ||| | ||||| || ||||| |||||||| || ||| Sbjct 706882 AAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTAC 706823 Query 33201 ATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAATCT 33244 || | ||| || || ||||| | |||||||| | |||||| || Sbjct 706822 ATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633631912875600