Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_008293.1 Length=135454 Score E Sequences producing significant alignments: (Bits) Value seq5 159 3e-34 seq6 150 2e-31 seq4 109 5e-19 >seq5 Length=1193180 Score = 159 bits (176), Expect = 3e-34 Identities = 174/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| || ||||| || ||||| | || || | ||||| ||||| ||| Sbjct 1151736 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTCATCT 1151795 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||||||||| || || ||| |||||| ||||| ||||| ||||||||||||| Sbjct 1151796 GACACTATCGA--CAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGACC 1151853 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| || || |||| Sbjct 1151854 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACA 1151913 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | |||||||| ||||| || || || ||||| | || ||||||| || Sbjct 1151914 ACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 1151962 >seq6 Length=742668 Score = 150 bits (166), Expect = 2e-31 Identities = 172/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 |||||||| ||||| ||||| || |||||||| |||| || | ||||| || || ||| Sbjct 86552 ATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCTTCT 86611 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| ||||| || || |||||||| ||| || || ||||| ||||||||||||| Sbjct 86612 GACACCATCGA--CAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGACC 86669 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176 |||| | |||| ||||| || || ||||||||||||| | | ||| | ||| |||| Sbjct 86670 AACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTACA 86729 Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 | || ||||| ||||| || || || || || | || | ||||| || Sbjct 86730 ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 86778 >seq4 Length=1293945 Score = 109 bits (120), Expect = 5e-19 Identities = 165/231 (71%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058 ||||| || ||||| ||||| | || || ||| | |||||| | || ||||||||||| Sbjct 738109 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCGTCC 738050 Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116 ||||| || || || || ||| || ||| ||||| || || |||||||| |||| Sbjct 738049 GACACCATTGA--CAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACC 737992 Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCG--CACTGTGGGCGATTA 25174 | ||| | ||||||| || || |||||| |||| || | | | |||| | | || || Sbjct 737991 AGCAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCG--GACTA 737934 Query 25175 CAATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225 ||| || || || || || ||||| || || || | || ||||||| || Sbjct 737933 CAACATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTAAGAGGTGG 737883 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 433327941906965