Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq7 325 4e-84
seq3 87.8 2e-12
seq9 82.4 9e-11
>seq7
Length=736534
Score = 325 bits (360), Expect = 4e-84
Identities = 548/778 (70%), Gaps = 35/778 (4%)
Strand=Plus/Minus
Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976
|| || |||||| || ||||| || | |||||| |||||||||| |||||| || ||
Sbjct 707543 CAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAG 707484
Query 92977 -AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCA 93035
||| | |||||||| ||||| || ||| | | || || || |||||||||| | |
Sbjct 707483 CAAGTTG-ACAGGTAGGGCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAA 707425
Query 93036 AGATTTCTATTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGT----ACATT 93088
||||| | | || | | ||| || || | | || | || ||| | |
Sbjct 707424 TGATTTGTCTGACAAT--TTTTTCGTCTGGGGTATGGTTC-----AAATGTGAAAAGAGC 707372
Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148
|| || ||||| ||||||||||||||||| |||| | |||| ||| ||| ||| ||
Sbjct 707371 AAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTC 707312
Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208
|||||||| | || |||| || || | ||| || || || ||||| |||||| ||
Sbjct 707311 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAG 707252
Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CT 93267
|| |||||||| || || ||||||||||| | | || ||||| ||| ||| ||
Sbjct 707251 AAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCT 707192
Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327
|| ||||||||||| ||||| ||||| |||| || ||||| || | |||||| || ||
Sbjct 707191 GCA-ATCCATTTTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGC 707133
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
|| |||| | | || | || | | |||| ||||| ||||| || || | ||||||
Sbjct 707132 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 707073
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
|||| ||||| | || ||||| ||||||||| || ||||||||| |||| || |
Sbjct 707072 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 707013
Query 93448 GATCTGCACTTC--TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGAT 93505
|| || || || |||||||| |||| || | ||||||||||||||||||||| ||
Sbjct 707012 AATTTGAACATCACTTGAGAAATTCTCA--ACTAAATTTTCATTGACTATACCATCAGAA 706955
Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATG-----TTTCTCATCATC-TTTAAGC 93559
|| ||||| || || || | || | | ||||| | | |||| || || || |
Sbjct 706954 GCAGCAAAGAACGC---TAGA-ACTCT-TGAAATGAAGAATCTTTCATTTTCGTTCAATC 706900
Query 93560 --TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617
|| | |||||| | |||||| || ||||| | ||| || ||||||| || ||||
Sbjct 706899 TATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATG 706840
Query 93618 CTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675
||||||| || |||||||| | ||| || || ||||| | |||||||| | |||||
Sbjct 706839 CTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAA 706782
>seq3
Length=1364687
Score = 87.8 bits (96), Expect = 2e-12
Identities = 82/102 (80%), Gaps = 3/102 (3%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||||||
Sbjct 194376 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 194317
Query 126328 TTCGAACCCCACACCTGACAAAT-TATTATTG--GAATTTTT 126366
||||||||||||| ||| ||||| | || ||| ||||| ||
Sbjct 194316 TTCGAACCCCACAGCTGTCAAATATTTTTTTGCTGAATTATT 194275
>seq9
Length=441842
Score = 82.4 bits (90), Expect = 9e-11
Identities = 66/80 (83%), Gaps = 0/80 (0%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||||||
Sbjct 96067 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 96008
Query 126328 TTCGAACCCCACACCTGACA 126347
||||||||||||| ||| ||
Sbjct 96007 TTCGAACCCCACAGCTGTCA 95988
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556860723431640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |