Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq7 325 4e-84 seq3 87.8 2e-12 seq9 82.4 9e-11 >seq7 Length=736534 Score = 325 bits (360), Expect = 4e-84 Identities = 548/778 (70%), Gaps = 35/778 (4%) Strand=Plus/Minus Query 92917 CAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAG 92976 || || |||||| || ||||| || | |||||| |||||||||| |||||| || || Sbjct 707543 CAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAG 707484 Query 92977 -AAGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCA 93035 ||| | |||||||| ||||| || ||| | | || || || |||||||||| | | Sbjct 707483 CAAGTTG-ACAGGTAGGGCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAA 707425 Query 93036 AGATTTCTATTACTCTACTATTTGGT---GGTTTTTGTACGACATAATTGT----ACATT 93088 ||||| | | || | | ||| || || | | || | || ||| | | Sbjct 707424 TGATTTGTCTGACAAT--TTTTTCGTCTGGGGTATGGTTC-----AAATGTGAAAAGAGC 707372 Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 || || ||||| ||||||||||||||||| |||| | |||| ||| ||| ||| || Sbjct 707371 AAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTC 707312 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 |||||||| | || |||| || || | ||| || || || ||||| |||||| || Sbjct 707311 AAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAG 707252 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTA-CT 93267 || |||||||| || || ||||||||||| | | || ||||| ||| ||| || Sbjct 707251 AAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCT 707192 Query 93268 GCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGC 93327 || ||||||||||| ||||| ||||| |||| || ||||| || | |||||| || || Sbjct 707191 GCA-ATCCATTTTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGC 707133 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 || |||| | | || | || | | |||| ||||| ||||| || || | |||||| Sbjct 707132 ATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATA 707073 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 |||| ||||| | || ||||| ||||||||| || ||||||||| |||| || | Sbjct 707072 AGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGG 707013 Query 93448 GATCTGCACTTC--TTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGAT 93505 || || || || |||||||| |||| || | ||||||||||||||||||||| || Sbjct 707012 AATTTGAACATCACTTGAGAAATTCTCA--ACTAAATTTTCATTGACTATACCATCAGAA 706955 Query 93506 GCTGCaaaaaaaGCCAATATATGCTTTATAAAATG-----TTTCTCATCATC-TTTAAGC 93559 || ||||| || || || | || | | ||||| | | |||| || || || | Sbjct 706954 GCAGCAAAGAACGC---TAGA-ACTCT-TGAAATGAAGAATCTTTCATTTTCGTTCAATC 706900 Query 93560 --TTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATG 93617 || | |||||| | |||||| || ||||| | ||| || ||||||| || |||| Sbjct 706899 TATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATG 706840 Query 93618 CTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAA 93675 ||||||| || |||||||| | ||| || || ||||| | |||||||| | ||||| Sbjct 706839 CTTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAA 706782 >seq3 Length=1364687 Score = 87.8 bits (96), Expect = 2e-12 Identities = 82/102 (80%), Gaps = 3/102 (3%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| ||||||||||||||||||||| ||| || | | ||||| | |||| ||||||| Sbjct 194376 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 194317 Query 126328 TTCGAACCCCACACCTGACAAAT-TATTATTG--GAATTTTT 126366 ||||||||||||| ||| ||||| | || ||| ||||| || Sbjct 194316 TTCGAACCCCACAGCTGTCAAATATTTTTTTGCTGAATTATT 194275 >seq9 Length=441842 Score = 82.4 bits (90), Expect = 9e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| ||||||||||||||||||||| ||| || | | ||||| | |||| ||||||| Sbjct 96067 CAGCTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 96008 Query 126328 TTCGAACCCCACACCTGACA 126347 ||||||||||||| ||| || Sbjct 96007 TTCGAACCCCACAGCTGTCA 95988 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556860723431640