Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq6 190 4e-43 seq4 181 2e-40 seq5 154 3e-32 >seq6 Length=742668 Score = 190 bits (210), Expect = 4e-43 Identities = 170/213 (80%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| || || || || ||||||||||| || ||||| | || || ||||| Sbjct 86764 CAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATC 86705 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || |||||||||||||| |||||||| |||||||| || Sbjct 86704 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATC 86645 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| |||||| |||||| ||||||||||| | ||||| ||||| ||||| ||||| Sbjct 86644 TTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGT 86585 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | ||||||||| || || ||||| Sbjct 86584 CTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 86552 >seq4 Length=1293945 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 738352 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 738411 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 738412 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 738471 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 738472 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 738531 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 738532 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 738580 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 738639 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 738640 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 738699 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 738700 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 738759 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 738760 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 738808 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 738867 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 738868 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 738927 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 738928 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 738987 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 738988 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020 Score = 181 bits (200), Expect = 2e-40 Identities = 168/213 (79%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 739036 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 739095 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 739096 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 739155 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 739156 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 739215 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 739216 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248 Score = 179 bits (198), Expect = 7e-40 Identities = 169/214 (79%), Gaps = 1/214 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 739464 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 739523 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || |||| ||| ||||| |||||||| || |||||||| Sbjct 739524 CTCTAGTTGTTTACCAGCGAAAATAAGTC-TTGCTGGTCTGGTGGAATACCCTCCTTGTC 739582 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 739583 CTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 739642 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| || || || |||||||| || ||||||||| Sbjct 739643 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCATT 739676 Score = 178 bits (196), Expect = 2e-39 Identities = 167/213 (78%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 737897 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 737956 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 737957 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 738016 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | || || || ||||| ||||| || Sbjct 738017 CTGGATCTTCGACTTGACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGATTGT 738076 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 738077 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109 Score = 178 bits (196), Expect = 2e-39 Identities = 168/213 (79%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| |||||||| ||||| ||||| || |||||||| || || ||||||||||| || || Sbjct 738125 CAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTC 738184 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||| || || || ||||| || ||||| || ||||| |||||||| || |||||||| Sbjct 738185 CTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTC 738244 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 || ||||| | |||||| || |||||||| | ||| || || ||||| ||||| || Sbjct 738245 CTGGATCTTCGACTTGAC-ATTTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 738303 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 ||| || || || |||||||| || |||||||| Sbjct 738304 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738336 >seq5 Length=1193180 Score = 154 bits (170), Expect = 3e-32 Identities = 162/213 (76%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 68249 CAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAGAGTGTCCTCCCATC 68308 ||| || ||||| || || || || ||||| ||||| || || || | || || ||||| Sbjct 1151948 CAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATC 1151889 Query 68309 TTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGAATGCCTTCCTTGTC 68368 |||||| ||||| || || || || |||||||||||||| |||||||| ||||||||||| Sbjct 1151888 TTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTC 1151829 Query 68369 TTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACTTCCAAGGTGATGGT 68428 ||| || || | |||||| ||||| ||||| | ||| || ||||| ||||| || || Sbjct 1151828 TTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGT 1151769 Query 68429 TTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || | || || || || || ||||| Sbjct 1151768 CTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1151736 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921622273276920