Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_013756.1
Length=368454
Score E
Sequences producing significant alignments: (Bits) Value
seq6 127 5e-24
seq5 123 6e-23
seq4 105 2e-17
>seq6
Length=742668
Score = 127 bits (140), Expect = 5e-24
Identities = 156/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| || || || |||||||||| ||||||||| | ||||| || ||
Sbjct 86767 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 86708
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || || ||||| || | || ||||| || ||| |||||
Sbjct 86707 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 86648
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || ||||||||||| || |||| |||||| | | ||| || || || || ||
Sbjct 86647 ATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 86588
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | || || |||||||||||
Sbjct 86587 GGTCTTACCGGTTAAGGTCTTGACAAAAATTTG 86555
>seq5
Length=1193180
Score = 123 bits (136), Expect = 6e-23
Identities = 155/213 (73%), Gaps = 0/213 (0%)
Strand=Plus/Minus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| ||| | ||| ||||| || |||||||| | ||||||||||| |||||| || ||
Sbjct 1151951 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1151892
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|||||| | ||||| || || ||||| || | || ||||| || ||| |||||
Sbjct 1151891 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 1151832
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
|| || || || ||| || |||| ||||| | || || || || || || ||
Sbjct 1151831 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 1151772
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|||||||| || | |||||| |||||||||||
Sbjct 1151771 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTG 1151739
Score = 86.0 bits (94), Expect = 1e-11
Identities = 76/95 (80%), Gaps = 0/95 (0%)
Strand=Plus/Plus
Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989
||| ||||||||| || || ||||| || |||||||| || |||||| | || ||||||
Sbjct 1151857 AAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACA 1151916
Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024
| || || || |||||||||||| | || ||||||
Sbjct 1151917 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 1151951
>seq4
Length=1293945
Score = 105 bits (116), Expect = 2e-17
Identities = 152/213 (71%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 738122 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738181
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 738182 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738241
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || ||| | |||||| | || || || ||||| |||||
Sbjct 738242 GTCCTGGATCTTCGACTTGAC-ATTTCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738300
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 738301 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738333
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 738349 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738408
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 738409 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738468
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 738469 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738528
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 738529 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738561
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 738577 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738636
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 738637 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738696
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 738697 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738756
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 738757 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738789
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 738805 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738864
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 738865 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738924
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 738925 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738984
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 738985 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 739017
Score = 105 bits (116), Expect = 2e-17
Identities = 151/213 (71%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 739033 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 739092
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 739093 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 739152
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 739153 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 739212
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 739213 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 739245
Score = 100 bits (110), Expect = 7e-16
Identities = 150/213 (70%), Gaps = 0/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 737894 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 737953
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | ||||||||| || ||| || ||
Sbjct 737954 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738013
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | | || || ||||| |||||
Sbjct 738014 GTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGAT 738073
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 738074 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738106
Score = 96.9 bits (106), Expect = 8e-15
Identities = 150/213 (70%), Gaps = 1/213 (0%)
Strand=Plus/Plus
Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473
||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| ||
Sbjct 739461 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 739520
Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533
|| || || || || || ||||| || || | |||||||| || ||| || ||
Sbjct 739521 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTC-TTGCTGGTCTGGTGGAATACCCTCCTT 739579
Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593
||||| ||||| ||| || || | |||||| | || || || ||||| |||||
Sbjct 739580 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 739639
Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626
|| || || || || || || ||||| || ||
Sbjct 739640 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 739672
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1178921433845737
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |