Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq6 127 5e-24 seq5 123 6e-23 seq4 105 2e-17 >seq6 Length=742668 Score = 127 bits (140), Expect = 5e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| || || || |||||||||| ||||||||| | ||||| || || Sbjct 86767 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 86708 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | ||||| || || ||||| || | || ||||| || ||| ||||| Sbjct 86707 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 86648 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || ||||||||||| || |||| |||||| | | ||| || || || || || Sbjct 86647 ATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 86588 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | || || ||||||||||| Sbjct 86587 GGTCTTACCGGTTAAGGTCTTGACAAAAATTTG 86555 >seq5 Length=1193180 Score = 123 bits (136), Expect = 6e-23 Identities = 155/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| ||| | ||| ||||| || |||||||| | ||||||||||| |||||| || || Sbjct 1151951 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1151892 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 |||||| | ||||| || || ||||| || | || ||||| || ||| ||||| Sbjct 1151891 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 1151832 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 || || || || ||| || |||| ||||| | || || || || || || || Sbjct 1151831 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 1151772 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || | |||||| ||||||||||| Sbjct 1151771 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTG 1151739 Score = 86.0 bits (94), Expect = 1e-11 Identities = 76/95 (80%), Gaps = 0/95 (0%) Strand=Plus/Plus Query 200930 AAAAACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACG 200989 ||| ||||||||| || || ||||| || |||||||| || |||||| | || |||||| Sbjct 1151857 AAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTACAACA 1151916 Query 200990 TCCAGAAAGAGTCTACTCTTCACCTTGTTTTGAGA 201024 | || || || |||||||||||| | || |||||| Sbjct 1151917 TTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGA 1151951 >seq4 Length=1293945 Score = 105 bits (116), Expect = 2e-17 Identities = 152/213 (71%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| || Sbjct 738122 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738181 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || || || || || ||||| || || | ||||||||| || ||| || || Sbjct 738182 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738241 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || ||| | |||||| | || || || ||||| ||||| Sbjct 738242 GTCCTGGATCTTCGACTTGAC-ATTTCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738300 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || || Sbjct 738301 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738333 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| || Sbjct 738349 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738408 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || || || || || ||||| || || | ||||||||| || ||| || || Sbjct 738409 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738468 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || || | |||||| | || || || ||||| ||||| Sbjct 738469 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738528 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || || Sbjct 738529 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738561 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| || Sbjct 738577 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738636 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || || || || || ||||| || || | ||||||||| || ||| || || Sbjct 738637 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738696 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || || | |||||| | || || || ||||| ||||| Sbjct 738697 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738756 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || || Sbjct 738757 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738789 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| || Sbjct 738805 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 738864 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || || || || || ||||| || || | ||||||||| || ||| || || Sbjct 738865 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738924 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || || | |||||| | || || || ||||| ||||| Sbjct 738925 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 738984 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || || Sbjct 738985 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 739017 Score = 105 bits (116), Expect = 2e-17 Identities = 151/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| || Sbjct 739033 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 739092 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || || || || || ||||| || || | ||||||||| || ||| || || Sbjct 739093 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 739152 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || || | |||||| | || || || ||||| ||||| Sbjct 739153 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 739212 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || || Sbjct 739213 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 739245 Score = 100 bits (110), Expect = 7e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| || Sbjct 737894 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 737953 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || || || || || ||||| || || | ||||||||| || ||| || || Sbjct 737954 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTT 738013 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || || | |||||| | | || || ||||| ||||| Sbjct 738014 GTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGAT 738073 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || || Sbjct 738074 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 738106 Score = 96.9 bits (106), Expect = 8e-15 Identities = 150/213 (70%), Gaps = 1/213 (0%) Strand=Plus/Plus Query 199414 TCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCC 199473 ||||| || | |||||| ||||||||||| |||| ||||||||| | | ||||| || Sbjct 739461 TCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACC 739520 Query 199474 ATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCG 199533 || || || || || || ||||| || || | |||||||| || ||| || || Sbjct 739521 GTCCTCTAGTTGTTTACCAGCGAAAATAAGTC-TTGCTGGTCTGGTGGAATACCCTCCTT 739579 Query 199534 CTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGAT 199593 ||||| ||||| ||| || || | |||||| | || || || ||||| ||||| Sbjct 739580 GTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGAT 739639 Query 199594 CGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || || || || || ||||| || || Sbjct 739640 TGTTTTGCCTGTTAGTGTCTTGACAAAGATCTG 739672 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178921433845737