Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_013953.1
Length=156344
Score E
Sequences producing significant alignments: (Bits) Value
seq4 118 1e-21
seq7 116 4e-21
>seq4
Length=1293945
Score = 118 bits (130), Expect = 1e-21
Identities = 163/227 (72%), Gaps = 1/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||| ||||| | || || ||| | ||
Sbjct 738336 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738277
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | ||| | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 738276 GACACCATTGAAATG-TCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738218
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || |||| ||| || ||||| || || |||| | || ||| |||||||||
Sbjct 738217 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738158
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || ||||| || | |||||||| ||
Sbjct 738157 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738111
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||| ||||| | || || ||| | ||
Sbjct 738564 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738505
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 738504 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738445
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || |||| ||| || ||||| || || |||| | || ||| |||||||||
Sbjct 738444 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738385
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || ||||| || | |||||||| ||
Sbjct 738384 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738338
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||| ||||| | || || ||| | ||
Sbjct 738792 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738733
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 738732 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738673
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || |||| ||| || ||||| || || |||| | || ||| |||||||||
Sbjct 738672 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738613
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || ||||| || | |||||||| ||
Sbjct 738612 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738566
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||| ||||| | || || ||| | ||
Sbjct 739020 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738961
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 738960 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738901
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || |||| ||| || ||||| || || |||| | || ||| |||||||||
Sbjct 738900 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738841
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || ||||| || | |||||||| ||
Sbjct 738840 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738794
Score = 113 bits (124), Expect = 5e-20
Identities = 161/227 (71%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||| ||||| | || || ||| | ||
Sbjct 739248 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 739189
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 739188 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 739129
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || |||| ||| || ||||| || || |||| | || ||| |||||||||
Sbjct 739128 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 739069
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || ||||| || | |||||||| ||
Sbjct 739068 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 739022
Score = 107 bits (118), Expect = 2e-18
Identities = 160/227 (70%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303
||||| || || || || || || || |||||||| ||||| | || || ||| | ||
Sbjct 738109 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCGTCC 738050
Query 38304 GACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCAA 38363
|||| | | | | | || || |||| ||||| ||||| ||||| | |||||
Sbjct 738049 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 737990
Query 38364 CAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 38423
||| | || |||| ||| || ||||| || || |||| | || ||| |||||||||
Sbjct 737989 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 737930
Query 38424 ATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||| ||||| ||||||| || ||||| || | || ||||| ||
Sbjct 737929 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTAAGAGGTGG 737883
Score = 107 bits (118), Expect = 2e-18
Identities = 162/229 (71%), Gaps = 1/229 (0%)
Strand=Plus/Minus
Query 38242 AAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCA 38301
||||||| || || || || || || || |||||||| ||||| | || || ||| |
Sbjct 739677 AAATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCAT 739618
Query 38302 CCGACAGCGTGCAAACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACC 38361
|||||| | | | | | || || |||| ||||| ||||| ||||| | ||||
Sbjct 739617 CCGACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACC 739558
Query 38362 AACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 38421
| || | || |||| ||| || ||||| || || |||| | || ||| |||||||
Sbjct 739557 AGCAA-GACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACA 739499
Query 38422 ACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGG 38470
||||||| ||||| ||||||| || ||||| || | |||||||| ||
Sbjct 739498 ACATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 739450
>seq7
Length=736534
Score = 116 bits (128), Expect = 4e-21
Identities = 389/599 (65%), Gaps = 15/599 (3%)
Strand=Plus/Minus
Query 132891 CAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTGCTGAAAGT 132950
||| |||||||| ||| ||| || || || || || |||| || |||||| ||| ||
Sbjct 707372 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 707313
Query 132951 CAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTGCCCGAAAA 133010
||| || ||||| | || | ||||| | ||| || |||| || || || || ||
Sbjct 707312 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 707253
Query 133011 GAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGCTTCTTTGCT 133070
||| | || || || || || || ||||||| | ||| | ||| || |||||
Sbjct 707252 GAAAATACCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATC 707193
Query 133071 GGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCGTTTCGATGGC 133130
|| ||||| | |||||||||||||||||||||| || || || ||||| || ||
Sbjct 707192 TGCAATCCATTTTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGC 707133
Query 133131 GTTCAACAAACGGAGTTTCTCTTCCGAGGAAC--GCACGTAGGTGTCGATGAGGGTCGAA 133188
|| || || | | | || | | ||| | | ||| || || || | |||
Sbjct 707132 ATTGAATAA--GAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAA 707075
Query 133189 TACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCACCGCGCCTCG 133248
|| ||||||| || | ||| ||||| ||||| || || || || || |||||
Sbjct 707074 TAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCT 707015
Query 133249 ACCACCTGCACTT--CTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATGCCGTCGC 133306
| || || | ||||| |||| ||| || | |||||| ||||| || || ||
Sbjct 707014 GGAATTTGAACATCACTTGA--GAAATTCTCAACTAAATTTTCATTGACTATACCATCAG 706957
Query 133307 TGGCGGCGAAAAAGGCCAGCACGTGCTTG--ATGAAATGGCGCTCGTTGTCGTTCAAGC- 133363
|| || || || || || || |||| ||||| | || || |||||||| |
Sbjct 706956 AAGCAGCAAAGAACGCTAGAAC--TCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCT 706899
Query 133364 --GCTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAACGACGC 133421
| ||| || || || ||||| || || | ||||| | ||||| || || ||
Sbjct 706898 ATTGTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGC 706839
Query 133422 CTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCACAAACC 133480
|| || || |||||||| ||| || || ||| | || ||||| | |||||||
Sbjct 706838 TTCTGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACC 706780
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 500172731226240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |