Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq9 230 3e-55 >seq9 Length=441842 Score = 230 bits (254), Expect = 3e-55 Identities = 969/1507 (64%), Gaps = 41/1507 (3%) Strand=Plus/Minus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGA-TAGATGTTCGTCGTGTAGG 105953 |||||||||| || || || || | |||||| ||| || || || | ||||| | Sbjct 320442 GTTGACAATCTGGAATTCACCGGCTAAAACTCTTCT-AGAGTAAATATTGGAAGTGTAAG 320384 Query 105954 GTTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCA 106013 ||||||||||||| || | ||| | ||||| | || || || || ||||||||||| | Sbjct 320383 GTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCAA 320324 Query 106014 TCA--AAAGACTGTTACGAAGACCCTTTTCCTTGATGCGTTCCTTGAGAACATCCCAGTC 106071 | || || | | | || || || ||||||| ||||| | ||||||||| Sbjct 320323 CAAGCAATGAATTTCTCAAA--CCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTC 320266 Query 106072 GTAGTTGAGCTTGGTTT-CACCTT--CCCACATATCAAATTGAAGCACCCCTTGGGACGT 106128 || | || |||||| | ||| |||| | |||||| || || | |||||||| | Sbjct 320265 ATA--TAAG-TTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGC 320209 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 ||||| || ||||| |||||||| | || | || |||||| || ||||| Sbjct 320208 AGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTC 320149 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || | || ||||| ||||||||||| || || ||||| ||||| ||||| || Sbjct 320148 CAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGA 320089 Query 106249 ATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAAT 106308 |||||||| | | ||| || || |||| || | |||||| ||||| | | |||| Sbjct 320088 ATCAAATGGTAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAAT 320029 Query 106309 AGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTCAACGGGATAAAAATTTCTGTCAAT 106368 ||||||| || |||||| || | | ||||| ||||| ||||| | ||||| || || Sbjct 320028 TGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGAT 319969 Query 106369 GACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATA-----A 106423 || | || | ||||| || |||| |||||| |||||||| | || ||| | | Sbjct 319968 GATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATA 319909 Query 106424 TCAAAAGTGCGAGTC-TC---TTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATT 106479 ||| ||| | ||| || |||| ||| | || | || | || ||||| Sbjct 319908 CCAACAGTTCTTGTCATCACTTTCA---ACAAATGCAGGCAATGCAACACTAGCTAAATT 319852 Query 106480 GCAAACAGCCGTCTCATCCTTATCTGTGTACTCTAAAATTTCTGTACACAAGTTGGAACT 106539 ||||| || || || || || || || | |||||| || || |||||| Sbjct 319851 ACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGA 319792 Query 106540 CTTAATCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCAT 106599 || || |||||||| | ||| ||| || ||||| || |||||||| || | ||| Sbjct 319791 TTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACAT 319732 Query 106600 GTAGGGCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCA-CACATCGGCGGCTG 106658 | | || || || || || || || | | | || | | ||| || | | || Sbjct 319731 GAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTG----TG 319676 Query 106659 GTACAATGG--CGTTGGCCCGTCCCTCCGC-CTCGTACTTTGTGTAGAGGGCTTCAAACT 106715 | ||| | | ||| | ||| | | || || || || || | ||| || | Sbjct 319675 CTTTAATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATT 319616 Query 106716 CCTCACCCACCGCGTCGGAGAGACCTGGTGCCTTGTCT-GGACAGAAAAGAGACCATTGA 106774 | ||||| | || | ||| |||| ||| || || |||| | || ||| | Sbjct 319615 CATCACCATATACATCACTCAAACCAGGTG-CTTCACTAGGGGAGAAGAAAGTCCAATCT 319557 Query 106775 CCACCCTCCTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCT 106834 || | |||||| | | ||| || | || |||||||| | | | || | |||| Sbjct 319556 TCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCT 319497 Query 106835 CTACACCGAGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCC 106894 || | | ||||| | ||| ||||| | | |||| || || | ||||| Sbjct 319496 CTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCT 319437 Query 106895 GCGTGCCATGGCTCAAGATAGACTGCGATAGATCC----CTTTCGACGCCCAGCTTGATT 106950 | ||||| ||||||| ||| | ||| | | || |||| | ||| |||| | Sbjct 319436 GAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTT-TATTACCACCTTGGTC 319378 Query 106951 TACATAGCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACC 107010 ||||| | || ||| ||||| || | || |||||||||||| |||| ||| ||| Sbjct 319377 AACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACC 319318 Query 107011 ATTTGTCCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACC 107070 ||| || || |||| ||| | | | ||| | || ||| || || | ||||||||| Sbjct 319317 ATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACC 319258 Query 107071 CCCAGCCCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGA 107130 ||||| || || || ||||| || | | ||| |||||||||| | || || Sbjct 319257 ACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGA 319198 Query 107131 GTCCTCCTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATT 107190 || ||||| | || | | ||| || ||||| || |||||| ||||| | ||| Sbjct 319197 ATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATT 319138 Query 107191 GAAGAGGGTTGGTGTTGCGTGAATGAACATACCT-TGGGACATCTTGTCGTATGTCTCCA 107249 ||| || ||||| | || || |||| |||||| | |||||| | || || || | Sbjct 319137 GAAAAGAGTTGGAGAAGCATGTGTGAA-ATACCTCTTTGACATCAAATTATAAGTTTCAA 319079 Query 107250 AGACAGAATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACATGTATTGGG 107309 ||||||||||| || || || || || || | ||| || | ||| | | | ||||| Sbjct 319078 TAACAGAATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGG 319019 Query 107310 GTGTTTCCATGAGGATGCCATCGAGCCGTTGAAGATAGCTCTTCTCAAGGGTTTTGAGAC 107369 | |||| | | |||| | | | |||||| ||| | || | ||||||| || Sbjct 319018 GCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAAC 318959 Query 107370 CAAAGTA 107376 |||| || Sbjct 318958 CAAAATA 318952 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589980718877640