Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq6 185 2e-41 seq5 179 8e-40 seq4 122 2e-22 >seq6 Length=742668 Score = 185 bits (204), Expect = 2e-41 Identities = 174/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | |||||| || || || ||||| || ||||| |||| | ||| Sbjct 86773 TCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGT 86714 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||||||||| |||||||||| ||||||||| || ||||| || Sbjct 86713 TCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACC 86654 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| || ||||| || ||||||||||| || || |||||||| ||| ||| ||||| | Sbjct 86653 TTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAA 86594 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || || || || || || | |||||| Sbjct 86593 GGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCAT 86552 >seq5 Length=1193180 Score = 179 bits (198), Expect = 8e-40 Identities = 173/222 (78%), Gaps = 0/222 (0%) Strand=Plus/Minus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | |||||| || | ||||||||| || || |||||||| ||||| || | | ||| Sbjct 1151957 TCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGT 1151898 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 ||| |||||||| | ||||||||||| |||||||||| ||||||||| || ||||| || Sbjct 1151897 TCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACC 1151838 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 ||| |||||||| ||||| |||||| || || || ||||| || || ||||| | Sbjct 1151837 TTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAA 1151778 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || |||||||| || || | |||||| Sbjct 1151777 GGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 1151736 >seq4 Length=1293945 Score = 122 bits (134), Expect = 2e-22 Identities = 162/224 (72%), Gaps = 1/224 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 739455 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 739514 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| ||| |||||||| ||||| || Sbjct 739515 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTC-TTGCTGGTCTGGTGGAATACC 739573 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 739574 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 739633 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCATTT 195142 || | || || ||||| | || || || || | ||||||| Sbjct 739634 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATTT 739677 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 737888 TCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 737947 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 737948 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 738007 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 738008 CTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGACGACTCCACCTCCAA 738067 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 738068 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 738343 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 738402 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 738403 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 738462 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 738463 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 738522 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 738523 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 738571 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 738630 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 738631 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 738690 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 738691 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 738750 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 738751 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 738799 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 738858 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 738859 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 738918 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 738919 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 738978 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 738979 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020 Score = 116 bits (128), Expect = 8e-21 Identities = 159/222 (72%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 194919 TCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGT 194978 ||| | ||||||||| | ||| || || ||||| || || || ||||| || | || || Sbjct 739027 TCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGT 739086 Query 194979 TCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCC 195038 || || || || || || ||||| ||||| ||||||| || |||||||| ||||| || Sbjct 739087 CCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACC 739146 Query 195039 TTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAG 195098 || ||||| || || || |||||| || ||||||||||| || ||||| || | Sbjct 739147 CTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAA 739206 Query 195099 GGTAACCGTCTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || | || || ||||| | || || || || | ||||| Sbjct 739207 TGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109481443632437