Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq9 215 3e-51 seq3 174 8e-39 >seq9 Length=441842 Score = 215 bits (238), Expect = 3e-51 Identities = 362/517 (70%), Gaps = 14/517 (3%) Strand=Plus/Minus Query 25896 AGAATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACA 25955 |||| ||| |||||| |||||| ||||||| | |||||||||||||| |||||||| | Sbjct 319573 AGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATA 319514 Query 25956 TTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTA 26015 ||| ||||||||||| ||||| ||||||||||| ||||| || || | | ||| | Sbjct 319513 AAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAA 319454 Query 26016 AGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAACTACCTTTTCTTT 26075 ||||||| ||||||||| ||||| || || | ||| | ||||| ||| ||||| Sbjct 319453 TAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTT 319394 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | |||||||| || || || |||||||| | ||| || || | | |||||||| || Sbjct 319393 TATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAA-TA 319335 Query 26136 ATCCAGTTGAAAAT-CCGTTTGTGCTATGAATCTTGGATCCTGTCGATCTAATATCGTGA 26194 |||| ||| | | || || || | ||| | || || || |||||||||| || Sbjct 319334 ATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGT 319275 Query 26195 GCATGAATACCGATTCCACCAGCCCATTTTGAAATAGCTGCACAATCTGAAACTGTATCG 26254 ||| | || || |||||||| ||| ||||| ||||| ||| | ||||| Sbjct 319274 ATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCA 319215 Query 26255 AAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAAAAAACAAGAAGATAATTGCGAA 26314 | || |||| ||| ||| | |||||| | | ||| ||||| ||||| | ||| | Sbjct 319214 TAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTG---A 319158 Query 26315 TGAGTT---GTTCCTGAATTAAATAATGTCGGTGTAGCATGAGTATAATA--TCCTTCAC 26369 | || || || ||||| || | || || | |||||| || |||| || || || Sbjct 319157 TTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGAC 319098 Query 26370 -TCAAAGCTGTATAAGTTTCAAGAACTTCATCGATAT 26405 ||||| |||||||||||| ||| ||| |||| Sbjct 319097 ATCAAA---TTATAAGTTTCAATAACAGAATCAATAT 319064 >seq3 Length=1364687 Score = 174 bits (192), Expect = 8e-39 Identities = 193/252 (77%), Gaps = 4/252 (2%) Strand=Plus/Minus Query 25898 AATAAATGCCAATCAGCATTTTGCTCAACTTTCTCCATAAATAAATCTGGAATCCACATT 25957 |||||| |||||| ||| | || |||||||||||||| | |||||||||||| | Sbjct 699446 AATAAACACCAATCTTCATCTCTTTCCACTTTCTCCATAAACATATCTGGAATCCATAGA 699387 Query 25958 GCATAAAATAAATCTCTCGCTCTCATTTCTTCTTTTCCGTGATTCTTTTTTAGATCTAAG 26017 ||| |||||||||||| |||||||||||||| || || |||||||| | | || | || Sbjct 699386 GCAATAAATAAATCTCTAGCTCTCATTTCTTCCTTCCCATGATTCTTCCTGATAT-TGAG 699328 Query 26018 AAA-TCAAAAATATCTGAGTGCCATGGTTCTAAATAGATAGCAAAA-CTACCTTTTCTTT 26075 ||| ||||||| ||| |||||||| |||||||| || |||||| |||| ||||| Sbjct 699327 AAAGTCAAAAACATCACCATGCCATGGCTCTAAATATAT-GCAAAATGCACCTGGTCTTT 699269 Query 26076 TTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATTGAAAACTTTCAACATTGGAACTA 26135 | |||||| || || || ||| ||||||| |||||| ||||| ||||| || | || Sbjct 699268 TGTTTCCACCCTGGTCAACATATTGTGCAGTTGAATTGAATACTTTTAACATAGGGATTA 699209 Query 26136 ATCCAGTTGAAA 26147 | || | ||||| Sbjct 699208 AACCGGATGAAA 699197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 253039966076825