Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq9 255 7e-63 seq1 89.7 6e-13 >seq9 Length=441842 Score = 255 bits (282), Expect = 7e-63 Identities = 913/1407 (65%), Gaps = 33/1407 (2%) Strand=Plus/Plus Query 75242 GGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGG 75300 || || || || || || ||||||||||| | || || || | |||||| | ||| Sbjct 319048 GGTATTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGG 319107 Query 75301 TATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCGCAGATGTC 75360 ||| |||| || || | ||||| || |||||| | ||||| |||||| || ||||| Sbjct 319108 TAT-TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTC 319166 Query 75361 CAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTAC 75420 || ||| | | || | ||||| || || || | |||||||||| ||| | | Sbjct 319167 TTCATGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAA 319226 Query 75421 GGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAG 75480 || ||||| || || || ||||| ||||||||| | || || ||| || | || Sbjct 319227 AGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAG 319286 Query 75481 AGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCT 75540 | | | | ||| |||| || || |||||| ||| |||| |||||||||||| | Sbjct 319287 ATCAACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGAT 319346 Query 75541 TCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCGTCGCAAGG---GGTC 75597 | | || ||||| ||| || | ||||| | |||| || | ||| ||| Sbjct 319347 TAGGGTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATAA-AAGACCTGGTG 319405 Query 75598 CATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGTTCCTTGAGTTACGAC 75656 | | || | || | || || |||||| | ||||| | || || |||| | | Sbjct 319406 CGTTTGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGA 319465 Query 75657 TCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCATCCCTGTGGATTCCAG 75716 ||||| ||| | ||||| | | |||||| | || | | | |||||||| | Sbjct 319466 AAAACCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTG 319525 Query 75717 ACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTTTTCTGTCC-AGACAAG 75775 | | || ||| | | |||||| | || | ||| || | |||| || || ||| Sbjct 319526 ATTTATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG 319585 Query 75776 GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCTCTACACAAAGTATGAA 75835 |||| ||| | || | ||||| || || ||| | || || || |||||| Sbjct 319586 -CACCTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAA 319644 Query 75836 GAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTT-TGGAAGGCTATTCTCAA 75894 || ||||||| || || | ||| | | ||| ||| | | || | | Sbjct 319645 AGAGAAGGTAGAGGCAGGAGAACAATTAAAGCA-CAAAAGTTATGGTATTCGATCTTAGA 319703 Query 75895 ATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGCTTGTAACAAGAAGAG 75954 | | || || || ||||| ||||| | ||| | || |||||||| ||||||||||| Sbjct 319704 AGCTCAAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATC 319763 Query 75955 TAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCACGGAAATTTTAGAGTA 76014 ||| ||| | |||||||| ||||| || ||| | ||| |||||| | || || Sbjct 319764 TAATCAACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATA 319823 Query 76015 CACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGCCCTTCCAAAGTATGT 76074 || || || || || ||||| ||||| || | || | || | ||| Sbjct 319824 TTCATCACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGT 319883 Query 76075 CAATGAA---GA-GACTCGCACTTTTGAT-----TATGAAAAACTTCATGAAATCACAAA 76125 |||| || ||| | ||| ||| | | ||| || | |||||||| ||||| Sbjct 319884 ---TGAAAGTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAA 319940 Query 76126 GATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAATTTTTATCCCGTTGAGACTGC 76185 | |||| || ||||| | || | |||| || ||||| | ||||| ||||| ||||| Sbjct 319941 GGTTGTGACTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGC 320000 Query 76186 GCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGT 76245 | | || |||||| || ||||||| |||| | | ||||| |||||| | || |||| Sbjct 320001 AAGGAGATCAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGC 320060 Query 76246 ATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGCCAAGGAGATGAATGCTCGTAT 76305 || || ||| | | |||||||||| ||||| ||||| ||||| || || Sbjct 320061 CTTCATGATGTTGAGATTACCATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAAT 320120 Query 76306 CTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGG 76365 ||||||||||| ||||| || | ||||||| ||| |||||| || | || Sbjct 320121 TTTTGAAACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCTATTAGGGATGG 320180 Query 76366 TTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTG 76425 | |||||||| ||||| || ||||| || |||||||| | || ||||||||| | || Sbjct 320181 ACCATATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTG 320240 Query 76426 GG--AAGGTG-AAACCAAGCTCAACTACGACTGGGATGTTCTCAAGGAACGCATCAAGGA 76482 || ||| | |||||| || | || ||||||||| | ||||| ||||||| Sbjct 320241 GGGTAAGAAGCCAACCAA-CTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGC 320297 Query 76483 GAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATGCCAACAGCCTCCACCGCACAA 76540 || || || | | | || || | | ||||||||||| || || || || | ||| Sbjct 320298 CAATGG--TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAA 320355 Query 76541 ATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCTACCTGAGAAGAACC 76600 || | ||| | || |||||||||||||| ||||| | || || ||| |||||| Sbjct 320356 ATTCTAGGTTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCTAGAAGAGTT 320415 Query 76601 CTCGCAGGTGAGTTTGTCATTGTCAAC 76627 | || ||||| || ||||||||| Sbjct 320416 TTAGCCGGTGAATTCCAGATTGTCAAC 320442 >seq1 Length=2559104 Score = 89.7 bits (98), Expect = 6e-13 Identities = 271/414 (65%), Gaps = 5/414 (1%) Strand=Plus/Plus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || || |||||||| ||||| || || | ||| || ||||| || || || | Sbjct 1529662 GGCGCAAAGATCCCTCGAGGTGCTATTTTAAATGGTCCACCCGGTACAGGTAAAACGTTA 1529721 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAAA 175394 || || ||||| || |||||| || || || ||| | | || |||| | | Sbjct 1529722 CTTGCTAAAGCCACTGCTGGTGAAGCAGGGGTTCCGTTCTACTCTGTT-TCTGGTTCTGA 1529780 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTGAAATCGC 175454 |||||||| |||||||||||||| ||||| | | ||||| || | || | | || Sbjct 1529781 ATTTGTGGAAATGTTTGTTGGTGTTGGTGCGTCACGTGTTCGTGAGTTGTTCAAGACTGC 1529840 Query 175455 CCGCGAAAATCAACCATGTATTGTCTTCATTGATGAGATTGATGCGGTGGGCAA--GCA- 175511 | |||||| ||||| |||||| ||| ||||||| || ||||| | || || || Sbjct 1529841 AAGAGAAAATGCACCATCTATTGTTTTCGTTGATGAAATCGATGCTATCGGAAAATCCAG 1529900 Query 175512 ACGCAGCGCTGGTGGTATGCCAGCAAATGACGAGAGAGAACAAACAATTAATCAACTACT 175571 | | | | | |||||| || ||||| || |||||| | || | ||||| || || Sbjct 1529901 AGGAAAGGGAAGAGGTATGGGAGGTAATGATGAAAGAGAAAACACCTTAAATCAGCTTCT 1529960 Query 175572 CACCGAGATGGATGGCTTTGACAATGAGACTGGCATTGTGGTTATTGCGGCCACTAATCG 175631 ||| |||||||| ||| | ||| | |||| ||| |||| | |||||||| Sbjct 1529961 AGTCGAAATGGATGGATTTAAGTCTGACGATCATGTTGTTGTTTTTGCAGGTACTAATCG 1530020 Query 175632 CGTGGATATCCTTGATGACGCCCTCCTTCGCCCGGGTCGTTTTGATCGCAAGAT 175685 || || | | || || | || | |||||| | |||||||| || || Sbjct 1530021 TGTTGACGTTTTGGACCCAGCTTTGCTAAGACCGGGTAGATTTGATCGTAAAAT 1530074 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596569517971680