Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq7 284 2e-71 seq5 154 2e-32 seq6 127 3e-24 >seq7 Length=736534 Score = 284 bits (314), Expect = 2e-71 Identities = 600/885 (68%), Gaps = 26/885 (3%) Strand=Plus/Minus Query 17861 GCTTTTTTGTATTCTCCGACTTTTTTCTCGAAGAAATTTGTCTTTCCTTCCAATGATATT 17920 || |||| ||| || |||| | || ||||| || ||||| || || | | || || Sbjct 707662 GCCTTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATG 707603 Query 17921 AAATTCATAAAATCAAATGGATTAGTG--GTTTTATAATATTTTTCTTGTATTAATTCGT 17978 | |||||| || |||||||| || || |||| ||||| |||| | Sbjct 707602 TTCTCCATAAAGTCGAATGGATTTGTAACGTCGTATACC--TTTTCACAACCTAATGCAA 707545 Query 17979 ATAATAATCTATCTGCTACAAATTCGACATATTGTGACATCAAATCGCAATTCATACCTA 18038 | || ||||||||| ||||| |||||||| || |||||||||| ||||||||| | Sbjct 707544 TCAGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGA 707485 Query 18039 GTAGTCTGAAAGGTAGAGCATCAAT-AATAAATTCTTTCTCTATCTCAACAGACTCTTTT 18097 | | ||| |||||| || ||| | || | |||||| || || ||||| | || | Sbjct 707484 GCAAGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTT-TCAATATCAACGGCTTCGGTA 707426 Query 18098 ATTATGTTTATTACCCTAGATT----TTGGCAATTTATTAATTATGTGATTATAATATAA 18153 || || | | | || | || | || || | || |||||| | | | Sbjct 707425 ATGATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAA--ATGTGA-----AAAGAG 707373 Query 18154 TAAACACGCAAAATCAGTGTGTAAACCTTCATCTCTGGATATTAATTCGTTACTAAACGT 18213 ||||| |||||||| || ||||||||||||||||| | || | ||||| ||||| Sbjct 707372 CAAACAAGCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGT 707313 Query 18214 TAACCCGGGCATTATACCTCttttttttAGCCAAAATATCGATGCGAAACTACTAGAAAA 18273 || || ||||| | |||||| ||||| | ||| || || ||||| || || ||| || Sbjct 707312 CAAACCTGGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAA 707253 Query 18274 GAATATACCCTCAAC-GCACGCGAACGCTATTAATCTTTCAGCAAA-ACTGTATTTATTG 18331 ||| ||||| ||||| ||| || || || | || || || ||||| | || || | | Sbjct 707252 GAAAATACCTTCAACAGCA-GCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTAT 707194 Query 18332 CT-CAGTATCCATTTTTGTGCCCATTCTCCTTNNNNNNNNATACACGGTATACTCTCTAT 18390 || || ||||||||| |||||||| | | ||||| || || | || || Sbjct 707193 CTGCA--ATCCATTTTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAAT 707136 Query 18391 AGCATTAAACAAATCATCTTTTTCTTTGGAATCTTTTATATAAGTGTCGATTAACAAAGA 18450 ||||| || || || |||| || | |||||| || ||||| || || || ||||| Sbjct 707135 TGCATTGAATAAGAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGA 707076 Query 18451 ATACATTTCAGAATGTATGCTTTCCATAGCTATCTGAAAACTATAAAACGATCTAGCCTC 18510 ||| |||| ||||| ||| ||||||| || || || | ||| || || ||||||| Sbjct 707075 ATAAGTTTCCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTC 707016 Query 18511 GGGATATTGAATCTCGCTATAAAATCTTTCTACCAAATTCTCATTAACTATACCGTCAGC 18570 ||| ||||| || || | || | || || ||||| ||||| |||||||| |||| Sbjct 707015 TGGAATTTGAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGA 706956 Query 18571 AGATGCGAAAAATGCCAAAACATATTTAATGAAATGTTTTTCATTATCCTTGA---GATT 18627 || || || || || | ||| | |||||| | ||||||| || || | ||| Sbjct 706955 AGCAGCAAAGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATT 706896 Query 18628 GTTCCATTCATCTATATCTTTTGATAGATCAACTTCTTCCGATGTCCAAAAAGATGATTC 18687 |||||| |||| | |||||| || ||||||| ||| |||| ||||| ||||||| ||| Sbjct 706895 GTTCCAATCATGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTC 706836 Query 18688 GGCCTGTTTGTACATTTTATAAATATCTTCATGTTGTATAGGAAA 18732 |||| |||||||||| |||| || | || | || ||||| Sbjct 706835 TGCCTTCTTGTACATTTGCCAAATTTCGTGATACTTGATTGGAAA 706791 >seq5 Length=1193180 Score = 154 bits (170), Expect = 2e-32 Identities = 176/234 (75%), Gaps = 2/234 (1%) Strand=Plus/Plus Query 155819 TAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGA 155878 ||| |||||||| ||| ||||||| || ||||| || |||||||| ||||||||||| Sbjct 1151732 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 1151791 Query 155879 TTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGA 155938 ||||| | ||| || || || |||||| ||||| || ||||| || || || || Sbjct 1151792 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 1151851 Query 155939 ACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTA 155998 ||||||||| | || | ||| |||||||| | |||||| |||||||| || || || Sbjct 1151852 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 1151911 Query 155999 TAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTG 156051 || || || ||| || | || ||||| ||||| || ||||||||||| |||| Sbjct 1151912 CAACAT-TCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGGTG 1151964 >seq6 Length=742668 Score = 127 bits (140), Expect = 3e-24 Identities = 169/233 (73%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 155820 AAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAAGAT 155879 || |||||||| ||| | || || || || || || || ||||| |||||||| ||| | Sbjct 86549 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 86608 Query 155880 TCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCAGAA 155939 ||||| | || || || || | || || |||||||| ||||| || || || || Sbjct 86609 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 86668 Query 155940 CAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGATTAT 155999 ||||||||| | || | ||| |||||||| | |||||| ||||||||||| || || Sbjct 86669 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 86728 Query 156000 AATATATCCAAA--GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGT 156050 | | ||||||| || | || ||||| || || || ||||| ||||| ||| Sbjct 86729 A--ACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGGT 86779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731871899367600