Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq7 159 7e-34 seq5 152 1e-31 seq6 141 2e-28 >seq7 Length=736534 Score = 159 bits (176), Expect = 7e-34 Identities = 474/731 (65%), Gaps = 16/731 (2%) Strand=Plus/Minus Query 49649 TAATCTATCGGCTACAAATTCAACATATTGTGACATTAATTCACAATTCATACCCAATAA 49708 || |||||| || ||||| || ||||| || |||| || || ||||||||| | || Sbjct 707540 TAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCAA 707481 Query 49709 TTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatta 49767 || | |||| || ||| | || | ||||||| | || || || |||| |||| | Sbjct 707480 GTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTT-CAATATCAACGGCTTCGGTAATGA 707422 Query 49768 tcataattatattattttttgataatttatatttaatatgattcgcatatattaaACATG 49827 | | | | | |||| | ||| || | ||| | | | | ||||| | Sbjct 707421 TTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGT---GAAAAGAGCAAACAAG 707365 Query 49828 CAAAATCAGTATGTAAACCCTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCTG 49887 ||||||| ||||||||||| || || ||| | || | || || || || || |||| Sbjct 707364 CAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTG 707305 Query 49888 GCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATAC 49947 |||| || ||||||||||| | ||| || || |||||||| || ||| ||||| |||| Sbjct 707304 GCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATAC 707245 Query 49948 CCTCGACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAATATCC 50007 | || ||| |||||||| | | || || |||||| | | | |||| |||| Sbjct 707244 CTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCC 707185 Query 50008 AATTTATAGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT- 50066 | |||| ||||| || || |||| ||||||| | || || |||| || || || ||| Sbjct 707184 ATTTTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATA 707125 Query 50067 --AATTCAtttttttCATNNNNNNNNNNNNNNNNNNNNNNNATTAATAAAGAATACATTT 50124 |||||| |||| | || ||||||||||| ||| Sbjct 707124 AGAATTCA---CTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTT 707068 Query 50125 CAGAATGTACAGCTTCCATAGCTATTTGAAATGAATAAAATTGTCTTGCTTCTGAATACT 50184 | ||||| | |||||| ||||| || ||| || | | || |||| | | Sbjct 707067 CCGAATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTT 707008 Query 50185 GAACTTCGGAAAAGAATCGTTCAACTAAATTCTCAGATACAATACCATCAGATGCTGCGA 50244 |||| || |||| ||||||||||| ||| || ||||||||||| || || | Sbjct 707007 GAACATCACTTGAGAAATTCTCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAA 706948 Query 50245 AGAATGCTAAAACGTATTTAATAAAATGTTTTTCATTATCTTTTAA---ATT-TTCCCAA 50300 |||| |||| ||| | ||| || | ||||||| || || || ||| |||| | Sbjct 706947 AGAACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAAT 706888 Query 50301 GATTCAAGATCGTTTGATAAATCTACTTCTTCTATTGTCCAAAATGATGCTACGGATTTT 50360 || ||| ||| || || | ||| | ||| || ||||| || |||||| | | || Sbjct 706887 CATGCAA-ATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTC 706829 Query 50361 TTATACATTTG 50371 || |||||||| Sbjct 706828 TTGTACATTTG 706818 >seq5 Length=1193180 Score = 152 bits (168), Expect = 1e-31 Identities = 175/233 (75%), Gaps = 2/233 (1%) Strand=Plus/Minus Query 192309 ACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTC-TTTAGAGATATTATAATCAG 192367 ||||||||| | | || ||||| || | ||||| || ||| || || || || |||| Sbjct 1151963 ACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGA-ATGTTGTAGTCAG 1151905 Query 192368 ATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGTG 192427 | || |||| |||| || ||||| ||||| |||||||| | ||| ||||| ||||||| Sbjct 1151904 ACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTG 1151845 Query 192428 GTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCTA 192487 | || ||||| || ||||| |||||| || ||||| |||| || || || || | Sbjct 1151844 GAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGA 1151785 Query 192488 CTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTTTA 192540 |||||| ||||| || ||||||||||| ||||||| ||| || ||||| ||| Sbjct 1151784 CTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1151732 >seq6 Length=742668 Score = 141 bits (156), Expect = 2e-28 Identities = 176/241 (73%), Gaps = 0/241 (0%) Strand=Plus/Minus Query 192299 GTTTAATAATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATAT 192358 ||| ||| ||||||||||| | | || || || || | |||| || || ||| | Sbjct 86789 GTTCAATGATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGT 86730 Query 192359 TATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTT 192418 | || || ||||| |||| |||| || ||||| ||||| |||||||| | ||| |||| Sbjct 86729 TGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTT 86670 Query 192419 GATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTG 192478 | |||||||| || ||||| |||||||| || || | || ||||| || | || | Sbjct 86669 GGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAG 86610 Query 192479 ACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCATTT 192538 | ||||| ||||||| |||||||| ||||| ||||| || || | ||| || ||||| | Sbjct 86609 AAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCT 86550 Query 192539 T 192539 | Sbjct 86549 T 86549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984479861249850