Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq7 183 5e-41
seq5 149 1e-30
seq6 132 9e-26
seq4 86.0 1e-11
>seq7
Length=736534
Score = 183 bits (202), Expect = 5e-41
Identities = 369/542 (68%), Gaps = 9/542 (2%)
Strand=Plus/Minus
Query 38832 TTTTGGTATTCAGAAACttttttttCGAAAAAGTTTGTTTTTCCTTCTAATGATATTAAA 38891
|||||||| || || ||| | |||||||||||||||||||| || | | || ||
Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600
Query 38892 TTCATAAAATCAAATGGATTTTTG--GTATTATAATATTTTTCTCCTATCAATACATATA 38949
| |||||| || ||||||||| | || |||| ||||| | ||| || |
Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACC--TTTTCACAACCTAATGCAATCA 707542
Query 38950 ATAATCTATCGGCCACAAATTCAACATATTGTAACATTAATTCACAATTCATACCCAATA 39009
|| |||||| || ||||| || ||||| || |||| || || ||||||||| | |
Sbjct 707541 GTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGCA 707482
Query 39010 ATTTAAATGGTAATGCATCA-TCAATAAATTCtttttctatttctacagcttgtttaatt 39068
| || | |||| || ||| | || | ||||||| | || || || |||| ||||
Sbjct 707481 AGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTT-CAATATCAACGGCTTCGGTAATG 707423
Query 39069 atcataattatattattttttgataatttatatttaatatgattcgcatataGTAAACAT 39128
|| | | | | |||| | ||| || | ||| | | | || |||||
Sbjct 707422 ATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGT---GAAAAGAGCAAACAA 707366
Query 39129 GCAAAATCCGTATGTAAACCTTCGTCCCTAGATATAAATTCATTACTAAAAGTTAATCCT 39188
|||||||| |||||||||||||| || ||| | || | || || || || || |||
Sbjct 707365 GCAAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCT 707306
Query 39189 GGCATTAATCCTCTCTTTTTAAGCCAAAATATTGATGCAAAACTACTAGAAAAGAATATA 39248
||||| || ||||||||||| | ||| || || |||||||| || ||| ||||| |||
Sbjct 707305 GGCATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATA 707246
Query 39249 CCCTCCACACACGCAAATGCTATTATTCTTGCTCCAAACATTAATTTATCATCTAAAATC 39308
|| || ||| |||||||| | | || || |||||| | | | |||| ||||
Sbjct 707245 CCTTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATC 707186
Query 39309 CAATTTATGGCCCAATCTGCtttttttttGATAGAAGGTATATTTTCTATAGCTTTAAAT 39368
|| |||| |||||| || || |||| ||||||| | || || |||| || || || |||
Sbjct 707185 CATTTTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAAT 707126
Query 39369 AA 39370
||
Sbjct 707125 AA 707124
>seq5
Length=1193180
Score = 149 bits (164), Expect = 1e-30
Identities = 177/240 (74%), Gaps = 0/240 (0%)
Strand=Plus/Minus
Query 171834 TTCATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTA 171893
||| || ||||||||| | || || ||||| || | ||||| || || ||| ||
Sbjct 1151971 TTCTTACCACCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTG 1151912
Query 171894 TAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGG 171953
|| || || |||| || | || || ||||| ||||| ||||| || | ||| ||||||
Sbjct 1151911 TAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGG 1151852
Query 171954 TCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGAC 172013
|||||||| || ||||| || ||||| |||||| || ||||| ||||| || ||
Sbjct 1151851 TCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGAT 1151792
Query 172014 GATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTTA 172073
|| || ||||||| ||||| || ||||||||||| ||||||| || || ||||| |||
Sbjct 1151791 GACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1151732
>seq6
Length=742668
Score = 132 bits (146), Expect = 9e-26
Identities = 171/236 (72%), Gaps = 0/236 (0%)
Strand=Plus/Minus
Query 171837 ATAATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAA 171896
|| ||||||||||| | || || || || || | |||| || || || || ||
Sbjct 86784 ATGATACCACCTCTCAATCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAG 86725
Query 171897 TCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCA 171956
|| ||||||| || | || || ||||| ||||| ||||| || | ||| |||||||||
Sbjct 86724 TCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCA 86665
Query 171957 GGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGAT 172016
||||| || ||||| |||||||| || || | || ||||| || || || || |||
Sbjct 86664 GGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGAT 86605
Query 172017 TCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCATTTT 172072
|| ||||||| |||||||| ||||| ||||| || || | || || ||||| ||
Sbjct 86604 TCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCTT 86549
>seq4
Length=1293945
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/157 (72%), Gaps = 0/157 (0%)
Strand=Plus/Plus
Query 171913 CGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGTGGTATTCCTTCTT 171972
|||| || | |||||||||||| ||||| | |||||| ||||| ||||| || || || |
Sbjct 737953 CGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCT 738012
Query 171973 TATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCTACTTCTAGAGTAA 172032
| || || || || || ||||| || || || ||||| || || || | || |
Sbjct 738013 TGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGA 738072
Query 172033 TGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
| ||||| || |||| ||| || | || ||||||||
Sbjct 738073 TTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | || | ||| || || || || ||
Sbjct 738335 ATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 738394
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | | |||| || | |||||||||||| ||||| | |||||| ||||| |||
Sbjct 738395 GAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGT 738454
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || || || || || || |||||| || || || || || ||
Sbjct 738455 GGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCC 738514
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | || || ||||| || |||| ||| || | || ||||||||
Sbjct 738515 ACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | || | ||| || || || || ||
Sbjct 738563 ATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 738622
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | | |||| || | |||||||||||| ||||| | |||||| ||||| |||
Sbjct 738623 GAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGT 738682
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || || || || || || |||||| || || || || || ||
Sbjct 738683 GGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCC 738742
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | || || ||||| || |||| ||| || | || ||||||||
Sbjct 738743 ACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | || | ||| || || || || ||
Sbjct 738791 ATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 738850
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | | |||| || | |||||||||||| ||||| | |||||| ||||| |||
Sbjct 738851 GAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGT 738910
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || || || || || || |||||| || || || || || ||
Sbjct 738911 GGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCC 738970
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | || || ||||| || |||| ||| || | || ||||||||
Sbjct 738971 ACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020
Score = 86.0 bits (94), Expect = 1e-11
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 171840 ATACCACCTCTAAGTCGTAATACTAAATGTAAAGTAGCCTCTTTAGAAATATTATAATCT 171899
||||||||||| | || || || || || | || | ||| || || || || ||
Sbjct 739019 ATACCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCC 739078
Query 171900 GATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCTCTGTTGGTCAGGT 171959
|| | | | |||| || | |||||||||||| ||||| | |||||| ||||| |||
Sbjct 739079 GAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGT 739138
Query 171960 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGTATCTGACGATTCT 172019
|| || || || || || || || || || |||||| || || || || || ||
Sbjct 739139 GGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCC 739198
Query 172020 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTGCAT 172069
|| || | || || ||||| || |||| ||| || | || ||||||||
Sbjct 739199 ACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905135875543800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |