Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq9 188 2e-42 seq1 113 1e-19 >seq9 Length=441842 Score = 188 bits (208), Expect = 2e-42 Identities = 479/728 (66%), Gaps = 3/728 (0%) Strand=Plus/Minus Query 155631 TATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTA 155690 ||||| ||||| |||||||| | || ||| ||||| || ||||| | || ||| Sbjct 319823 TATTCAACAATTTCACAGCATAAATTGGAAGATTTGATAACACCCAAATTTTGTTGATTA 319764 Query 155691 GATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCG 155750 ||||| ||||||| |||||||| |||| ||| | || || || || || | || || Sbjct 319763 GATTTCTTGTTACATGCATCCTTATATAACATGAAAGGTGTACCAGTTTCAGTTTGAGCT 319704 Query 155751 TCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTCCGAC 155810 || | ||| ||| | | | || |||||| | || ||| ||||| Sbjct 319703 TCTAAGATCGAATACCATAACTTTTGTGCTTTAATTGTTCTCCTGCCTCTACCTTCTCTT 319644 Query 155811 TCATATTTCATATACAGCGTTCGGTAATCCTCACCGTAACAATCACTCAGTCCAGGGCAC 155870 |||||||| |||| | | | | || ||||| || |||||||| ||||| Sbjct 319643 TCATATTTGGTATATAATTCTTTGAATTCATCACCATATACATCACTCAAACCAGGTGCT 319584 Query 155871 TTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATACATCA 155930 | | ||| | || | | |||| || ||| || | |||||||||| |||| Sbjct 319583 TCACTAGGGGAGAAGAAAGTCCAATCTTCATTTTTCTCAACTCTTTCCATAAATAAATCA 319524 Query 155931 CTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCCGTGATTCTTC 155990 ||| | |||| ||| | || ||||| | || || | ||||| || ||| Sbjct 319523 GGAATCCATAAAGCAGGGAATAAATCTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTC 319464 Query 155991 CGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCAAAACTA 156050 | | || | || || |||||| | ||| ||||| | ||| | ||||| | Sbjct 319463 CTGATATCAATAAAATCAAGAATATCTGAATGCCAAGGCTCAATATATAGTGCAAACGCA 319404 Query 156051 CCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACACCTAGC 156107 ||| || || ||||| || || ||||||| ||||| ||||| ||||| | | | Sbjct 319403 CCAGGTCTTTTATTACCACCTTGGTCAACATACCTTGCAGTGTTATTAAAGACCCTAATC 319344 Query 156108 ATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGATGAGCGA 156167 || |||||||| |||||||| || ||||| || ||| ||||| ||||||| ||| | | Sbjct 319343 ATTGGAATAATCCCATTGGATGTACCATTAGTACCGGCAATATAAGAACCAGTTGATCTA 319284 Query 156168 ACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCATTCCTTT 156227 | |||||| ||||||| ||||||||||| | ||| ||||| ||| ||||| || Sbjct 319283 ATATTATGTATATGTAACCCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCTTTC 319224 Query 156228 ACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCACGAACTT 156287 | ||||| | ||||||||||| ||||| || | ||||| | || | || ||| Sbjct 319223 AAAGTATCATAGATACCTTCAATGGAATCGTCCTTCATTGCAACTAAGAAACATGAAGAC 319164 Query 156288 AATTGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAAATACTTA 156347 | |||| || ||| || || | ||||| || || || | ||||| | |||||| | Sbjct 319163 ATTTGATTTCTTGGAGTACCCGAATTGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTC 319104 Query 156348 TTAGACAT 156355 || ||||| Sbjct 319103 TTTGACAT 319096 >seq1 Length=2559104 Score = 113 bits (124), Expect = 1e-19 Identities = 327/502 (65%), Gaps = 10/502 (2%) Strand=Plus/Minus Query 288850 CTATCAAACCTACCAGAACGAGTTAATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCT 288909 |||||||| ||||| | | |||| ||| || || ||||| | |||||| || || Sbjct 2407886 CTATCAAATCTACCTGGTCTCATTAAAGCTTTATCCAACATATCTGGTCTGTTGGTACCT 2407827 Query 288910 GCCAATACAACAATAGATTCGGTTTGCTTAAATCCATCCATACTTGTTAAAATTTGATTA 288969 || | | |||| | || || |||| |||||||| ||||| ||| ||| Sbjct 2407826 GCTAGAATGACAACATGGTCAGTAGAGCTAAAGCCATCCATTTCAACTAAAAGTTGGTTA 2407767 Query 288970 AGTGTTTGTTCCCTTTCATCATTTGAACCTCTTGAATCACCCGAATCGCTCCtttttt-- 289027 || || |||| |||| ||||| | |||| || || || | || || Sbjct 2407766 AGAGTAGCTTCCTTTTCGTCATTGG---CTCT-----CATTTGATTCTTTTCTCTTGCAC 2407715 Query 289028 tACCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTG 289087 | |||| ||||| ||||| |||| || || | ||| |||| | | || || || Sbjct 2407714 TTCCAATTGCATCGATTTCATCAACAAATATAATACAAGGAGCCATCTTCCTAGCTGTTT 2407655 Query 289088 CAAATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAG 289147 ||| || || | ||||| || || |||| ||||||| ||||||| ||||| |||||| Sbjct 2407654 TAAACAAATCACGAACACGAGACGCACCAACACCAACAAACATTTCAACAAACTCAGAAC 2407595 Query 289148 CGGATACTTGAATGAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCT 289207 | || || | |||| ||| || || |||||| ||| |||| || | || | Sbjct 2407594 CAGAGACGGATAAAAATGGAACACCGGCCTCACCTGCTGTAGCCTTCGCTAGCAAAGTTT 2407535 Query 289208 TACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACT 289267 |||| || ||||| || || || | | || |||| | ||||| || | || Sbjct 2407534 TACCGGTACCAGGAGGACCTGACAAGATGGCACCTCTTGGGATCTTTGCACCTAAACGCT 2407475 Query 289268 TATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCAT 289327 ||| || || |||||||||| |||| |||| | ||| | ||||| |||| Sbjct 2407474 CATACTTAGAGGGATTCTTTAAAAAGCTGACAAATTCCATGATTTCTTCCTTTGCTTCAT 2407415 Query 289328 CACATCCTGCTACATCAGCAAA 289349 |||| ||||| ||||||||||| Sbjct 2407414 CACAACCTGCAACATCAGCAAA 2407393 Score = 91.5 bits (100), Expect = 4e-13 Identities = 317/486 (65%), Gaps = 13/486 (3%) Strand=Plus/Minus Query 288874 AATGCTGGGTCTAATATATCGGCTCTGTTTGTTGCTGCCAATACAACAATAGATTCGGTT 288933 || |||||||| || | || | | || || |||| || ||||||| | ||| Sbjct 1530044 AAAGCTGGGTCCAAAACGTCAACACGATTAGTACCTGCAAAAACAACAACATGATCGTCA 1529985 Query 288934 TGCTTAAATCCATCCATACTTGTTAAAATTTGATTAAGTGTTTGTTCCCTTTCATCATTT 288993 ||||||||||||||| || || ||||| | || | ||| ||||||||||| Sbjct 1529984 GACTTAAATCCATCCATTTCGACTAGAAGCTGATTTAAGGTGTTTTCTCTTTCATCATT- 1529926 Query 288994 GAACCTCTTGAATCAC--CCGAATCGCTCCtttttttACCAACAGCATCAATTTCGTCAA 289051 ||||| | | | || || ||| |||| || | |||||| ||||| |||| Sbjct 1529925 --ACCTCCCATACCTCTTCCCTTTC-CTCTGGATTTT-CCGATAGCATCGATTTCATCAA 1529870 Query 289052 TGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCAAATAATTCTCTTACACGGGATG 289111 ||||| | | | || | ||||| ||| ||| | || || || | ||||| || | Sbjct 1529869 CGAAAACAATAGATGGTGCATTTTCTCTTGCAGTCTTGAACAACTCACGAACACGTGACG 1529810 Query 289112 CTCCAAGACCAACATACATTTCTACAAATTCAGAAGCGGATACTTGAAT-GAATGTTACA 289170 | |||| ||||||| ||||||| |||||||||||| | || || || | ||| | || Sbjct 1529809 CACCAACACCAACAAACATTTCCACAAATTCAGAACCAGAAAC-AGAGTAGAACGGAACC 1529751 Query 289171 TTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTTACCTGTTCCAGGTGGTCCCTCT 289230 |||||| || || || | || || | || |||||||| || ||||| || | | Sbjct 1529750 CCTGCTTCACCAGCAGTGGCTTTAGCAAGTAACGTTTTACCTGTACCGGGTGGACCATTT 1529691 Query 289231 AATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT--ATATTTCTCAGGGCTCTTTA 289288 || | | | || || | ||||| || | ||| ||| || | || | |||| Sbjct 1529690 AAAATAGCACCTCGAGGGATCTTTGCGCC--TAATCTTTCATACTTTTGGGGATTTTTTA 1529633 Query 289289 AAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTCATCACATCCTGCTACATCAGCAA 289348 | || |||| ||| || || | ||||| |||| ||| || || |||||| || Sbjct 1529632 AGAAACTAACAAACTCCATAATCTCTTCCTTTGCTTCATTACAACCAGCAACATCATTAA 1529573 Query 289349 AAGTAA 289354 | |||| Sbjct 1529572 ATGTAA 1529567 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471817392565707