Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_023177.1 Length=124688 Score E Sequences producing significant alignments: (Bits) Value seq6 122 7e-23 seq4 113 4e-20 seq5 105 5e-18 >seq6 Length=742668 Score = 122 bits (134), Expect = 7e-23 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 107553 AAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCT 107612 || ||||||||||||||||| || ||||| || || ||||||||| | ||| || || Sbjct 86549 AAGATGCAAATTTTTGTCAAGACCTTAACCGGTAAGACCATTACCTTAGAAGTTGAATCT 86608 Query 107613 GGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGAT 107672 || || ||| | | || || |||||||| ||||| ||||| | || || Sbjct 86609 TCTGACACCATCGACAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATTCCACCTGAC 86668 Query 107673 CAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTAC 107732 || || |||||||| | ||| ||||| || | || || | | ||| | | |||||| Sbjct 86669 CAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTATCCGACTAC 86728 Query 107733 AACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||| |||||||| ||||| | ||| |||| ||||||||| |||| || Sbjct 86729 AACATCCAAAAGGAATCTACCCTTCACTTGGTCTTGAGATTGAGAGGTGG 86778 >seq4 Length=1293945 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 738109 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCGTCC 738050 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | | || || ||||| || || || || | || || ||| Sbjct 738049 GACACCATTGACAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 737990 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 737989 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 737930 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| |||||||| |||| || Sbjct 737929 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTAAGAGGTGG 737883 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 738564 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738505 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 738504 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738445 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 738444 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738385 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 738384 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738338 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 738792 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738733 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 738732 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738673 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 738672 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738613 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 738612 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738566 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 739020 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738961 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 738960 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738901 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 738900 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738841 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 738840 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738794 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 739248 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 739189 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 739188 GACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 739129 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 739128 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 739069 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 739068 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 739022 Score = 109 bits (120), Expect = 4e-19 Identities = 161/227 (71%), Gaps = 1/227 (0%) Strand=Plus/Minus Query 107556 ATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTGGC 107615 ||||| || |||||||| || ||||||||||||| || || | || |||| | | Sbjct 738336 ATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCATCC 738277 Query 107616 GATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATCAG 107675 || || | | | || || ||||| || || || || | || || ||| Sbjct 738276 GACACCATTGAA-ATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACCAG 738218 Query 107676 CAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACAAC 107735 ||||||||||||| || |||||||| || ||||||| | ||| | ||||||||||| Sbjct 738217 CAGAGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACAAC 738158 Query 107736 ATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 || || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 738157 ATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 738111 Score = 107 bits (118), Expect = 2e-18 Identities = 162/229 (71%), Gaps = 1/229 (0%) Strand=Plus/Minus Query 107554 AAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGCTG 107613 ||||||| || |||||||| || ||||||||||||| || || | || |||| | Sbjct 739677 AAATGCAGATCTTTGTCAAGACACTAACAGGCAAAACAATCACATTGGAGGTGGAGTCAT 739618 Query 107614 GCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGATC 107673 ||| || | | | || || ||||| || || || || | || || | Sbjct 739617 CCGACACCATTGATAATGTCAAGTCGAAGATCCAGGACAAGGAGGGTATTCCACCAGACC 739558 Query 107674 AGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTACA 107733 |||| |||||||||| || |||||||| || ||||||| | ||| | ||||||||| Sbjct 739557 AGCA-AGACTTATTTTCGCTGGTAAACAACTAGAGGACGGTAGGACACTCTCGGACTACA 739499 Query 107734 ACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 |||| || |||||||| ||| | ||| |||| ||||||||| |||| || Sbjct 739498 ACATCCAGAAGGAGTCGACGCTCCACTTGGTTTTGAGATTGAGAGGTGG 739450 >seq5 Length=1193180 Score = 105 bits (116), Expect = 5e-18 Identities = 162/231 (70%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 107552 TAAAATGCAAATTTTTGTCAAAACTTTAACAGGCAAAACCATTACCGTCGAAACGGAGGC 107611 ||| |||||||||||||| ||||||||||| || || || |||||| | ||| ||| | Sbjct 1151732 TAAGATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCTTAGAAGTCGAGTC 1151791 Query 107612 TGGCGATACTGTCGGCCAGGTAAAACAAAAGATTGCCGATAAAGAAGGCGTGCCCGTGGA 107671 || ||| ||| | | || || || || || || ||||| | || || Sbjct 1151792 ATCTGACACTATCGACAATGTCAAGTCTAAAATCCAAGACAAGGAAGGTATTCCACCTGA 1151851 Query 107672 TCAGCAGAGACTTATTTATGCGGGTAAACAGCTGGAGGACGCCAAAACAATGGCGGACTA 107731 || || |||||||| | ||| ||||| || | || || | | ||| || | ||||| Sbjct 1151852 CCAACAAAGACTTATCTTTGCAGGTAAGCAATTAGAAGATGGTAGAACTTTGTCTGACTA 1151911 Query 107732 CAACATTCAAAAGGAGTCTACGTTGCACATGGTGTTGAGATTGCGAGGGGG 107782 ||||||||||||||| ||||| | ||| | || |||||||| |||| || Sbjct 1151912 CAACATTCAAAAGGAATCTACTCTTCACTTAGTCTTGAGATTAAGAGGTGG 1151962 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 398876746525579