Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq5 129 5e-25 seq4 104 2e-17 >seq5 Length=1193180 Score = 129 bits (142), Expect = 5e-25 Identities = 167/231 (72%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || || || | || || || ||||| || ||||| ||||||||||| || || | Sbjct 1151962 CCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 1151903 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | ||| || | ||| || || ||| | || | |||||| || || || ||| Sbjct 1151902 AAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGA 1151843 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 ||||| || |||||||| | ||| |||||| | || | ||||||||| || ||| Sbjct 1151842 ATACCTTCCTTGTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACT 1151783 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTTA 29790 || | || ||||| || |||||||| ||||||||||| || ||||| ||| Sbjct 1151782 TCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1151732 >seq4 Length=1293945 Score = 104 bits (114), Expect = 2e-17 Identities = 160/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || ||||| || || || || ||||| || |||| Sbjct 738111 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738170 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || |||||||| ||||| | || | ||| ||||| || || ||| Sbjct 738171 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738230 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || |||||| |||| | ||||| || || || Sbjct 738231 ATACCCTCCTTGTCCTGGATCTTCGACTTGACA-TTTCAATGGTGTCGGATGACTCCACC 738289 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || |||||||| |||| || || ||||| |||||||| Sbjct 738290 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738336 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || ||||| || || || || ||||| || |||| Sbjct 738338 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738397 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || |||||||| ||||| | || | ||| ||||| || || ||| Sbjct 738398 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738457 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || |||||| | || | ||||| || || || Sbjct 738458 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACC 738517 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || |||||||| |||| || || ||||| |||||||| Sbjct 738518 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || ||||| || || || || ||||| || |||| Sbjct 738566 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738625 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || |||||||| ||||| | || | ||| ||||| || || ||| Sbjct 738626 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738685 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || |||||| | || | ||||| || || || Sbjct 738686 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACC 738745 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || |||||||| |||| || || ||||| |||||||| Sbjct 738746 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || ||||| || || || || ||||| || |||| Sbjct 738794 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738853 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || |||||||| ||||| | || | ||| ||||| || || ||| Sbjct 738854 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738913 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || |||||| | || | ||||| || || || Sbjct 738914 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACC 738973 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || |||||||| |||| || || ||||| |||||||| Sbjct 738974 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || ||||| || || || || ||||| || |||| Sbjct 739022 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 739081 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || |||||||| ||||| | || | ||| ||||| || || ||| Sbjct 739082 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 739141 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || |||||| | || | ||||| || || || Sbjct 739142 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACC 739201 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 || | || || |||||||| |||| || || ||||| |||||||| Sbjct 739202 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248 Score = 104 bits (114), Expect = 2e-17 Identities = 161/229 (70%), Gaps = 1/229 (0%) Strand=Plus/Plus Query 29560 CCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCA 29619 || || ||||| | || ||||| || ||||| || || || || ||||| || |||| Sbjct 739450 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 739509 Query 29620 ATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGA 29679 | || | | || || |||||||| ||||| | || | |||| |||| || || ||| Sbjct 739510 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTT-GCTGGTCTGGTGGA 739568 Query 29680 ATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACT 29739 |||||||| ||||| || | || |||||| | || | ||||| || || || Sbjct 739569 ATACCCTCCTTGTCCTGGATCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACC 739628 Query 29740 TCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTT 29788 || | || || |||||||| |||| || || ||||| |||||||||| Sbjct 739629 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCATTT 739677 Score = 100 bits (110), Expect = 2e-16 Identities = 165/238 (69%), Gaps = 0/238 (0%) Strand=Plus/Plus Query 29549 TTTATCGTTGTCCTCCCCTCAAACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGT 29608 |||||| | || || || || | || ||||| || ||||| || || || || |||| Sbjct 737872 TTTATCATGCACCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGT 737931 Query 29609 TATAATCCGCAATGGTGCGAGAATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCT 29668 | || |||| | || | | || || |||||||| ||||| | || | ||| |||| Sbjct 737932 TGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCT 737991 Query 29669 GATCCGGCGGAATACCCTCTTTGTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAG 29728 | || || ||||||||||| ||||| || | || |||||| | || | ||||| | Sbjct 737992 GGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTGTCAATGGTGTCGG 738051 Query 29729 AAAGTTCTACTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCAT 29786 | || || || | || || |||||||| |||| || || ||||| |||||||| Sbjct 738052 ACGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 385219148356551