Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_024697.1
Length=370920
Score E
Sequences producing significant alignments: (Bits) Value
seq9 250 6e-61
seq7 131 4e-25
seq5 86.0 1e-11
>seq9
Length=441842
Score = 250 bits (276), Expect = 6e-61
Identities = 583/869 (67%), Gaps = 19/869 (2%)
Strand=Plus/Plus
Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361
||||||||||||||||||| | ||| | |||| | | | | ||||| ||||
Sbjct 318950 ACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTG 319009
Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421
||| | || ||||| | | | | ||||| ||||||||||||| ||||||||
Sbjct 319010 CCGAAAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTG 319069
Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476
| ||||||||||| |||| || | | || ||| || |||| |||||| |
Sbjct 319070 ATTCTGTTATTGAAACTTATAATTTGAT--GTCAAAG---AGGTATTTCACACATGCTTC 319124
Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAG 110535
||| || || || || | || ||| || ||| || |||| || |||||| | |
Sbjct 319125 TCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCATG-TTTCTTAGTTG 319183
Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595
||| || || ||||| ||||||||||| |||||| || | |||||| |||| | ||||
Sbjct 319184 CAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTT 319243
Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655
| |||| |||| || ||||| | || | ||| ||||| | |||| || | |||
Sbjct 319244 CCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCAACTGGTTCTTATA 319303
Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715
| || | || ||| | || | ||| || |||||||| | || ||||| || |||
Sbjct 319304 TTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGGGTCTTTAATAACA 319363
Query 110716 CTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCG 110772
|||||| ||||| | |||||||| ||| ||| ||| | ||||| | ||| | |
Sbjct 319364 CTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACCTGGTGCGTTTGCACTATATATTG 319423
Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832
| ||||||||||||||||| |||| || | || | | ||||| || || ||||
Sbjct 319424 AGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAAAGAAG 319483
Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892
|| |||||| | |||||||| ||| | |||||| | |||||||| ||| || | |
Sbjct 319484 AAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGAAAGAG 319543
Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952
|| | |||||| ||| || | | | ||| | | |||||| | |||||
Sbjct 319544 TTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAGTGATG 319603
Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCA-AGTTTCGC 111011
||||||| | || || |||| | || |||||||||| |||||| | || |
Sbjct 319604 TATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAGAAGGTAGAGGCAGGA 319663
Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071
||| |||| ||| ||| | | |||| ||| | ||| | ||| |||||||||
Sbjct 319664 GAAC-AATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGAAACTGGT 319722
Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130
|| |||| || || ||||| ||| ||| ||| |||||||||||| ||||| ||
Sbjct 319723 ACACCTTTCATGTTATATAAGGATGCAT-GTAACAAGAAATCTAATCAACAAAATTTGGG 319781
Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159
|| || ||| ||||| |||||||
Sbjct 319782 TGTTATCAAATCTTCCAATTTATGCTGTG 319810
>seq7
Length=736534
Score = 131 bits (144), Expect = 4e-25
Identities = 465/717 (65%), Gaps = 21/717 (3%)
Strand=Plus/Plus
Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491
|| |||||||| || ||||||| ||| | ||||| ||||| | | || | |||
Sbjct 706788 CTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTC 706847
Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTG 131551
||||||| || || || ||| | |||||||| | |||||||| || ||| | |||
Sbjct 706848 TGGACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGG-AACAATAGA--TTG 706904
Query 131552 AATGAAAA----AGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGC 131605
|| ||||| ||||| | |||| | |||||| || ||||| || | ||||||
Sbjct 706905 AACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGT 706964
Query 131606 ATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAAT--TGATATTCCTGAAGTAA 131663
|| || | ||||||| | ||| |||||| ||||| || | | ||||| || | |
Sbjct 706965 ATAGTCAATGAAAATTTAGTTGAGAATTTC--TCAAGTGATGTTCAAATTCCAGAGGCTA 707022
Query 131664 CATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTAT 131723
|| ||||| || ||| | ||| |||||| || | ||||| ||||
Sbjct 707023 AATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTATTCTTTAT 707082
Query 131724 TGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATT---ATTTGATGCTGTAA 131780
||||||| | | | ||| || | | || || | |||| ||| |||| |
Sbjct 707083 TGATTGATACTTACATCAAAGATCCAAAGGA---AAGTGAATTCTTATTCAATGCAATTG 707139
Query 131781 ATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATT 131840
| | | | || || ||| | || || |||||||| | ||||||||| |||| |
Sbjct 707140 AAACAATCCCATGTATCAAAGAAAAGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAG 707199
Query 131841 CCGCTAATTTTTCTACA-AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA 131899
|| | | ||| | | || | || || |||||| |||||||||||| ||||| ||
Sbjct 707200 ATGC-ATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 707258
Query 131900 GGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTG 131959
||| | || | ||||| ||| | || ||| | || |||||||| || | | ||
Sbjct 707259 GGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTC 707318
Query 131960 TCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTAT 132019
||||| | | || | |||||||||| || ||||| || |||||| || ||| |
Sbjct 707319 TCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTT 707378
Query 132020 AGAAAATTTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTT 132079
| | || ||| | || ||||| | | | | |||| | || | |||||| |||
Sbjct 707379 TCACATTTGAACCATACCCCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTT 707438
Query 132080 GATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAAT 132136
||||| || ||| | | | || || || | ||| ||| ||| | || ||||||
Sbjct 707439 GATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAAT 707495
>seq5
Length=1193180
Score = 86.0 bits (94), Expect = 1e-11
Identities = 113/154 (73%), Gaps = 2/154 (1%)
Strand=Plus/Minus
Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT-CA 304947
||||||||| |||| || | ||||||||||| |||||||| |||||| ||| ||
Sbjct 912460 CAATATCATGTTGCTACTTATATGGATAATGATATTGCTGGTCAGCCGCAGGC-TCTACA 912402
Query 304948 AAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTAT 305007
| ||| || ||||| | || |||||| || |||| ||||||||||||||| |
Sbjct 912401 GAAATCAGGTAGACCGATCAAATCTATTAGAGCTCGTCTTAAGGGTAAAGAGGGTCGTTT 912342
Query 305008 TCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041
||||||| | ||||| || | |||||||||
Sbjct 912341 GAGAGGTAACTTGATGGGTAAGAGAGTTGATTTT 912308
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1186812632733571
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |