Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq9 250 6e-61 seq7 131 4e-25 seq5 86.0 1e-11 >seq9 Length=441842 Score = 250 bits (276), Expect = 6e-61 Identities = 583/869 (67%), Gaps = 19/869 (2%) Strand=Plus/Plus Query 110302 ACTATTTTGGTTTCAAAACTCTTGAACGTGCTTATTTACTTCGTGTCAATGGCGAGATCA 110361 ||||||||||||||||||| | ||| | |||| | | | | ||||| |||| Sbjct 318950 ACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGAATAAATGGTAAGATTG 319009 Query 110362 TTGAACGTCCTCAACACATGTTTCTTCGTGTTGCGATTGGTATTCATGGACATGATATTA 110421 ||| | || ||||| | | | | ||||| ||||||||||||| |||||||| Sbjct 319010 CCGAAAGGCCCCAACATTTAATAATGAGAGTTGCCGTTGGTATTCATGGTGATGATATTG 319069 Query 110422 AAGCTGTTATTGAATGTTATGATGTATTAAGTAAAAAGAAAGCTATT-----CATGCTAC 110476 | ||||||||||| |||| || | | || ||| || |||| |||||| | Sbjct 319070 ATTCTGTTATTGAAACTTATAATTTGAT--GTCAAAG---AGGTATTTCACACATGCTTC 319124 Query 110477 TCCTACCCTATTTAACGCAGGAACTAATGGAGGACAATTGGCTTCTTGCTTTCTTC-TAG 110535 ||| || || || || | || ||| || ||| || |||| || |||||| | | Sbjct 319125 TCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCATG-TTTCTTAGTTG 319183 Query 110536 GAATTAACGATGATTCTATTGAAGGTATTTATGATGCTCTTAAAGAAACTGCTCTTATTT 110595 ||| || || ||||| ||||||||||| |||||| || | |||||| |||| | |||| Sbjct 319184 CAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAATGTGCTTTGATTT 319243 Query 110596 CTAAAAACTCTGGAGGAATTGGTATTCACGTTCATGATATTCGCTCAAAAGGAGCAAATA 110655 | |||| |||| || ||||| | || | ||| ||||| | |||| || | ||| Sbjct 319244 CCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCAACTGGTTCTTATA 319303 Query 110656 TCGCAACAGCGAAGGGTGCTTCAACTGGACTTGTTCCAATGTTAAGAGTCTTCAACGACA 110715 | || | || ||| | || | ||| || |||||||| | || ||||| || ||| Sbjct 319304 TTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGGGTCTTTAATAACA 319363 Query 110716 CTGCAAAATATGTGAATCAAGGTGG---TAAGAGAAATGGCTCATTTGCTATCTATCTCG 110772 |||||| ||||| | |||||||| ||| ||| ||| | ||||| | ||| | | Sbjct 319364 CTGCAAGGTATGTTGACCAAGGTGGTAATAAAAGACCTGGTGCGTTTGCACTATATATTG 319423 Query 110773 AACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAAAATCAAGGATTTGAAG 110832 | ||||||||||||||||| |||| || | || | | ||||| || || |||| Sbjct 319424 AGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAACCACGGTAAAGAAG 319483 Query 110833 AACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCAGATTTATTCATGAAACGTG 110892 || |||||| | |||||||| ||| | |||||| | |||||||| ||| || | | Sbjct 319484 AAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTTATTTATGGAAAGAG 319543 Query 110893 TTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGTTCTCCTGGTCTATCTGATG 110952 || | |||||| ||| || | | | ||| | | |||||| | ||||| Sbjct 319544 TTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAGCACCTGGTTTGAGTGATG 319603 Query 110953 TATATGGAAAAGAGTTTGAAGACCTTTACGAAAAATATGAAAAAGAAGGCA-AGTTTCGC 111011 ||||||| | || || |||| | || |||||||||| |||||| | || | Sbjct 319604 TATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAGAAGGTAGAGGCAGGA 319663 Query 111012 AAACAAATTCCAGCTCAAGAACTTTGGTTCAAAATCCTTGAATCACAAGTTGAAACTGGA 111071 ||| |||| ||| ||| | | |||| ||| | ||| | ||| ||||||||| Sbjct 319664 GAAC-AATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTCAAACTGAAACTGGT 319722 Query 111072 ACTCCTTATATTTTGTATAAAGAT-CATATTAATCGCAAATCTAATCAAATGAATTTAGG 111130 || |||| || || ||||| ||| ||| ||| |||||||||||| ||||| || Sbjct 319723 ACACCTTTCATGTTATATAAGGATGCAT-GTAACAAGAAATCTAATCAACAAAATTTGGG 319781 Query 111131 AACAATTAAGTCTAGTAATTTGTGCTGTG 111159 || || ||| ||||| ||||||| Sbjct 319782 TGTTATCAAATCTTCCAATTTATGCTGTG 319810 >seq7 Length=736534 Score = 131 bits (144), Expect = 4e-25 Identities = 465/717 (65%), Gaps = 21/717 (3%) Strand=Plus/Plus Query 131432 CTATTTCCAATTAAACATCACGATGTTTTCGATATGTATAAGAAATCTGTTGCGGCCTTC 131491 || |||||||| || ||||||| ||| | ||||| ||||| | | || | ||| Sbjct 706788 CTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAAGCATCTTTC 706847 Query 131492 TGGACTGTTGAAGAGATCGATATGACCAAAGATATTGATGATTGGGAAAAATTAACCTTG 131551 ||||||| || || || ||| | |||||||| | |||||||| || ||| | ||| Sbjct 706848 TGGACTGCGGAGGAAATTGATCTCTCCAAAGATTTGCATGATTGG-AACAATAGA--TTG 706904 Query 131552 AATGAAAA----AGATTTTG--TTTCCAAAGTTCTTGCATTCTTCGCCGGAAGTGATGGC 131605 || ||||| ||||| | |||| | |||||| || ||||| || | |||||| Sbjct 706905 AACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTCTGATGGT 706964 Query 131606 ATTGTTATTGAAAATCTTGTTATTAATTTCATTCAAGAAAT--TGATATTCCTGAAGTAA 131663 || || | ||||||| | ||| |||||| ||||| || | | ||||| || | | Sbjct 706965 ATAGTCAATGAAAATTTAGTTGAGAATTTC--TCAAGTGATGTTCAAATTCCAGAGGCTA 707022 Query 131664 CATCGTTCTACACATTTCAAGCCGCTGTTGAATCTATTCATAGCGAGATGTATTCATTAT 131723 || ||||| || ||| | ||| |||||| || | ||||| |||| Sbjct 707023 AATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTATTCTTTAT 707082 Query 131724 TGATTGAGAGTCTTGTTAAAAATGAAGATGATAAAAATAAATT---ATTTGATGCTGTAA 131780 ||||||| | | | ||| || | | || || | |||| ||| |||| | Sbjct 707083 TGATTGATACTTACATCAAAGATCCAAAGGA---AAGTGAATTCTTATTCAATGCAATTG 707139 Query 131781 ATAAATTTCCTGCAATTAAAAAGAAAGCAGAATGGGCTATTAAATGGATTCAAGATGATT 131840 | | | | || || ||| | || || |||||||| | ||||||||| |||| | Sbjct 707140 AAACAATCCCATGTATCAAAGAAAAGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAG 707199 Query 131841 CCGCTAATTTTTCTACA-AGACTTGTAGCTTTTGCTTGTGTTGAAGGTATATTCTTTTCA 131899 || | | ||| | | || | || || |||||| |||||||||||| ||||| || Sbjct 707200 ATGC-ATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 707258 Query 131900 GGTGCTTTCTGTGCTATCTTTTGGCTTAAGAAGCGTGGATTGATGCCTGGACTCTCATTG 131959 ||| | || | ||||| ||| | || ||| | || |||||||| || | | || Sbjct 707259 GGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTTC 707318 Query 131960 TCCAATCAATTCATCTCGAGAGATGAAGCATTGCATACTGAATTTGCTATATTAATCTAT 132019 ||||| | | || | |||||||||| || ||||| || |||||| || ||| | Sbjct 707319 TCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTTT 707378 Query 132020 AGAAAATTTGCTGATAAACTTGATGAAAATAATATTAAACAACTTATAAGCGAAGCAGTT 132079 | | || ||| | || ||||| | | | | |||| | || | |||||| ||| Sbjct 707379 TCACATTTGAACCATACCCCAGACGAAAAAATTGTCAGACAAATCATTACCGAAGCCGTT 707438 Query 132080 GATATCGAGAAGGAGTTTATTACAGAAGCTTTGCCTTGCAATTTGATTGGGATGAAT 132136 ||||| || ||| | | | || || || | ||| ||| ||| | || |||||| Sbjct 707439 GATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGAAT 707495 >seq5 Length=1193180 Score = 86.0 bits (94), Expect = 1e-11 Identities = 113/154 (73%), Gaps = 2/154 (1%) Strand=Plus/Minus Query 304889 CAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGCAGGCATCT-CA 304947 ||||||||| |||| || | ||||||||||| |||||||| |||||| ||| || Sbjct 912460 CAATATCATGTTGCTACTTATATGGATAATGATATTGCTGGTCAGCCGCAGGC-TCTACA 912402 Query 304948 AAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGGTCGTAT 305007 | ||| || ||||| | || |||||| || |||| ||||||||||||||| | Sbjct 912401 GAAATCAGGTAGACCGATCAAATCTATTAGAGCTCGTCTTAAGGGTAAAGAGGGTCGTTT 912342 Query 305008 TCGAGGTAATCTAATGGGAAAACGTGTTGATTTT 305041 ||||||| | ||||| || | ||||||||| Sbjct 912341 GAGAGGTAACTTGATGGGTAAGAGAGTTGATTTT 912308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186812632733571