Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq9 560 1e-154 seq7 264 2e-65 >seq9 Length=441842 Score = 560 bits (620), Expect = 1e-154 Identities = 1401/2102 (67%), Gaps = 51/2102 (2%) Strand=Plus/Minus Query 68410 AGATAGTACATACCGGTTTTCAGACCTAGACTCCATCCGTAGAAATGCATACTTGTTAGT 68469 || || |||||||| || || || || |||| || ||||||||||| |||| | Sbjct 320744 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 320685 Query 68470 TTGGAATAACTTGGATCGGCTATATGAATATTCATCGATTGACTTTGATCGATGAAAGCT 68529 || |||||| | ||| || ||||| ||||| ||||| | | | || Sbjct 320684 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 320625 Query 68530 CCTCTATCTGCCGCCATTTTTATAATACTCTTTTGAGGAATTTCCCAAATAGTCTTAAAA 68589 |||||||| || ||||| | ||||| ||||||| | || ||||| | ||||||| | Sbjct 320624 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 320565 Query 68590 ATCTGTTTGATATCATCTGGAAGGCTCG-TA--TTTTGAATGGATCCACCATCGGATATA 68646 | | ||||| || | |||| ||| || || ||||| || ||| ||| || || Sbjct 320564 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 320505 Query 68647 ATTATATTCTTGATCTCATCATTCCACAATTTTCTCTCCGTTAAAACTCTAAGGAGATGC 68706 || || || || ||||||||| | | | || |||| |||| | | || Sbjct 320504 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 320445 Query 68707 GGATTAACTATTTGAAATTCCCCAGATAACACTCTACGAGTGTAAATATTACTGGTATAT 68766 || || || || || ||||| || | ||| ||||| | || ||||||||| || || Sbjct 320444 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 320385 Query 68767 GGTTCCACAGATTCATTATTTCCCAGAATTTGAGCAGTTGATGCAGTTGGCATAGGTGCC 68826 ||||| | |||| || | || |||||||||| ||||| ||||| ||||| ||||| Sbjct 320384 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 320325 Query 68827 ACCAATAAACTATTTCTAAGACCATGTGTTATGATTTTATCTTTTAGATGTTTCCAATCC 68886 || | || |||||| | ||||| | ||||||| || |||| ||| ||||| Sbjct 320324 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTA-ATG-----AATCC 320271 Query 68887 CAA--AGATCAGATGGTA--CAACATTCC--AAAGATCGTATTGTAGAATTCCGTTACTT 68940 || | || || |||| | | | || ||||||| | ||||| | || | | Sbjct 320270 CAGTCATATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGAT 320211 Query 68941 GCATATGATCCATTATATGTTTCATAAGGTCCTTCCTGTTCAGCTAGTTCACAACTTGCC 69000 ||| ||||| | | | || ||||| ||||| ||| || || |||| ||||||| Sbjct 320210 GCAGGAGATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCC 320151 Query 69001 TCTAATGCACCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCTAGA 69060 || || ||| | | |||||| ||||| ||||| | |||| || || | ||||||| | Sbjct 320150 TCCAAAGCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGC 320091 Query 69061 CTATCGAATGGATAATGTAAA-AGAATAAATGCATCTGCCAATCCCTGAACCCCAATACC 69119 ||| ||||| |||| | || | || || ||||||||||| || || || |||| | | Sbjct 320090 GAATCAAATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGC 320032 Query 69120 GATAGGTCTATGTCTCTTATTTGAACT---TTCAGCTTCTGGAATAGGATAATAATTAAT 69176 || ||||| | |||| ||||||| || | ||| ||| || |||||| || || | Sbjct 320031 AATTGGTCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCT 319975 Query 69177 ATCTATAATTTTATT-AAGATTTCGGACTACTACTTTAACCACGTCCTTTAGTTTGAGAA 69235 ||| || |||||||| ||| ||| | | || || || | || | || || || Sbjct 319974 ATCGATGATTTTATTCAAGTTTTTAGTC-ACAACCTTTGTAATTTCATGTAACTTCTCAA 319916 Query 69236 AATCAAATC----GTCCATCT-ATAACA---AACATATTCAG----TGCTACAGATGCTA 69283 | | | | | || | | | || || |||| || ||| ||| ||| |||| Sbjct 319915 AGTTATACCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTA 319856 Query 69284 GATTACAAACTGCTACCTCATTAGAATTTGCATATTGTATTATCTCTGTACATAGATTAC 69343 ||||||||||||| || | || || ||||| | || || |||| ||| Sbjct 319855 AATTACAAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGG 319796 Query 69344 TACATTTGATAGTCCCCAGATTTTGCTGATTACTCTTTTTGTTACAGGCGTCCTTGTAAA 69403 | |||||||| |||| |||||| |||||| || |||||||| || ||||| || | Sbjct 319795 AAGATTTGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATA 319736 Query 69404 GAATAAACGGAGTACCAGTTTCAATCTGAGATTCGATAATAGATTTCCA-AACGACCCTA 69462 || || || |||||||||||| | |||| ||| | || || | ||| ||| | Sbjct 319735 ACATGAAAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATAACTTTTGT- 319677 Query 69463 GCATTTATTACGGTCTTGTAACGCTTC--TCTTTTTCATATTGTGTATATAGCCGTTCGA 69520 || || ||| | ||| | | || | ||| ||||||||| ||||||| || || Sbjct 319676 GCTTTAATT--GTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGA 319619 Query 69521 ATTCATCTCCCCAAACATCATCCAATCCAGGACATTCATTTGGACACATCAATGACCACA 69580 ||||||| || | |||||| ||| ||||| |||| | || | | || | ||| Sbjct 319618 ATTCATCACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAAT 319559 Query 69581 CATCATCATCCTTAACTCGTTTCATAAATAGATCGGGAATCCAAAGAGCTATAAAGAGAT 69640 | |||| | || ||||| || |||||||| ||| |||||||| | ||| || | || Sbjct 319558 CTTCATTTTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAAT 319499 Query 69641 CTCTGGTTCTATTTTCTTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATAT 69700 |||| | |||| ||||||| || || ||||| | | ||| | ||| || | ||||| Sbjct 319498 CTCTTGCTCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATAT 319439 Query 69701 CAGAATGCCATGGTTCTAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGAT 69760 | |||||||| || || | ||||| || | | || |||| |||||| || || || | Sbjct 319438 CTGAATGCCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGT 319379 Query 69761 CTATGTATCTGGCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTAC 69820 | | || || |||||||||||| |||| || | ||| |||||||| ||||| ||| ||| Sbjct 319378 CAACATACCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTAC 319319 Query 69821 CATTTGTTCCAGAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTC 69880 |||| || || | ||||||| || ||| | ||||||| ||| || || || | Sbjct 319318 CATTAGTACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATAC 319259 Query 69881 CTCCTGCCATTTTAGAGATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGC 69940 | || || |||| || || | |||||| |||||| || ||||| ||||| || ||| Sbjct 319258 CACCAGCAGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGG 319199 Query 69941 TATCATCTATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCAT 70000 ||| || |||| || | ||||| ||||||||||| | ||| |||| || Sbjct 319198 AATCGTCCTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAAT 319139 Query 70001 TAAATAATGTAGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAA 70060 | || | || ||||| || || ||||| | | | || | || ||| || ||||||| Sbjct 319138 TGAAAAGAGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAA 319079 Query 70061 TAGCTGATTCTATATCC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGA 70119 || | || || ||||| ||| |||||| || | || || | ||| | | ||| || Sbjct 319078 TAACAGAATCAATATCATCACC-ATGAATACCAACGGCAACTCTCATTATTAAATGTTGG 319020 Query 70120 GGTCGTTCTACCGTTTTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAAC 70179 || | ||| | | ||| ||||||| | || || || |||| | ||||| || Sbjct 319019 GGCCTTTCGGCAATCTTACCATTTATTCTTAAAAGATAACTCCTTTCTAATGTTTTGAAA 318960 Query 70180 CCAAAATAGTTGTATGAAAAGTCTCTTTCGTAAATAATAACAGAATTTAGTTTATCCTTA 70239 ||||||||||| || |||||||| || ||| ||| || || || | ||| | | Sbjct 318959 CCAAAATAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCA 318900 Query 70240 TATTTGGTAACTATATCCATAACAGTAGGTGAGATAATCGGAGATCGTTTACCATTTTTA 70299 | ||| || || ||| | ||| || || |||| |||||||||||||| Sbjct 318899 TTTTTTTGGACAATTTCCCAAGTCTCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTA 318840 Query 70300 GGATTAACATAGTTGAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTG 70359 |||| || ||| | ||| | | | || ||| ||| || |||||| ||| Sbjct 318839 GGATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTT 318780 Query 70360 TGTAAATTTGATATGGCTATTCTGGCTGCTAGAATAGCATAGTCAGGATG--TTG-TGTA 70416 ||||| ||||| || || | ||| || || | | ||||| || ||||| | | ||| Sbjct 318779 TGTAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTC 318720 Query 70417 GTACAAGTAGCTGCTATTTCCGCAGCTAACGTATCTAATTCTATAGTTGTAACTCCGTTA 70476 || ||| ||| | |||| |||||||| |||||||||| | ||||||||| || | | Sbjct 318719 ATATAAGCAGCAG---TTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCA 318663 Query 70477 TA 70478 || Sbjct 318662 TA 318661 >seq7 Length=736534 Score = 264 bits (292), Expect = 2e-65 Identities = 595/887 (67%), Gaps = 18/887 (2%) Strand=Plus/Minus Query 39326 TTTTGGTATTCACCAACGCGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 39385 |||||||| || || | || |||||||| || ||||| || | | || || || Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600 Query 39386 TCCATGAAATCAAACGGATTAGTTGCATTATAtttttttttAAATCCTAATTCTGAAATC 39445 ||||| || || || ||||| || | | ||| |||| | | |||||| | |||| Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGC---AATC 707543 Query 39446 AAT---CTATCTGCAACAAATTCTATGTATGTTTTCATCATTTCACAATTCATTCCTATG 39502 | | |||||||||||||| || | || ||||| || |||||| || | Sbjct 707542 AGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGC 707483 Query 39503 AGTTTAACTGGTAGAGCCTCCGTTAGAAACTCTTTTTCGATGTCTACGGCCTCTGTTATT 39562 | || || ||||| || || || | | | ||||| || || ||||| || || || Sbjct 707482 AAGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTTTTCAATATCAACGGCTTCGGTAATG 707423 Query 39563 ATCGATGTTACTACCTCATCACTCGGTGGATGCAATAAATGTTTAAACATTAAGCAGGCG 39622 || | | || | | || || | ||| |||||| ||| | || || || Sbjct 707422 ATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCA 707363 Query 39623 AAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGTCCAGGC 39682 || || ||||| || |||||||||| ||| | ||||| || || || | || ||| Sbjct 707362 AAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGC 707303 Query 39683 ATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAGAAGATGCCT 39742 || | ||| | |||||| | ||| || |||| ||||| || ||||| ||||| || ||| Sbjct 707302 ATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCT 707243 Query 39743 TCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTATCATTATGT---ATCCAC 39799 || || || |||||||| || | |||||| | | || ||| |||| | ||||| Sbjct 707242 TCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCAT 707183 Query 39800 TTCTGTGCCCAATCAGCTTTCTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAG 39858 || ||||| || || || |||||| | ||| || |||||||| || ||||| || | Sbjct 707182 TTTAAGGCCCATTCGGCCTT-TTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAA 707124 Query 39859 ATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAACAGACTATACATTTCTGA 39918 | | |||| | |||||| | || ||||| || || | | ||| |||| || Sbjct 707123 GAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGA 707064 Query 39919 ATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATTTGTAC 39978 ||| |||||||| ||| || || || || || |||||| | || || | |||||| || Sbjct 707063 ATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAAC 707004 Query 39979 CTC--TGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCATCACTAGCGGCAAAA 40036 || | | ||| ||| | | ||||||||||| ||||| |||||| ||| ||||| Sbjct 707003 ATCACTTGAGAAATTCT--CAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 706946 Query 40037 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT---TTATTCCAGTCA 40093 || || | || | ||| || || |||||| ||||| || ||||| ||| Sbjct 706945 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 706886 Query 40094 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGACGCCTCTGCCTTTTTG 40153 | | |||||| || | ||| | ||| || || ||||| || || || |||||||| ||| Sbjct 706885 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 706826 Query 40154 TACATGTTCCATATATCACGATATTGTATTGGAAAAATAACAAATCT 40200 ||||| | ||| || || |||| | |||||||| | |||||| || Sbjct 706825 TACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686908705550040