Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq7 273 2e-68 >seq7 Length=736534 Score = 273 bits (302), Expect = 2e-68 Identities = 596/875 (68%), Gaps = 33/875 (4%) Strand=Plus/Plus Query 43697 AGGTTTGTCGTGTTTCCAATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAG 43756 |||||||| | |||||||| | ||||| || || |||||||||||||| || ||| | Sbjct 706779 AGGTTTGTTCTCTTTCCAATCAAGTATCACGAAATTTGGCAAATGTACAAGAAGGCAGAA 706838 Query 43757 GCGTCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCAC-ATTGGAT--- 43812 || || || ||||| || || ||| ||||| | | ||||| || ||| |||||| Sbjct 706839 GCATCTTTCTGGACTGCGGAGGAAATTGATCTCTCCAAAGATTT-GCATGATTGGAACAA 706897 Query 43813 TGCATTAAAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAG 43872 | ||| || | | |||| | || || || ||| | ||||| |||||||| Sbjct 706898 TAGATTGAACGAAAATGAAAGATTCTTCATTTCAAGAGTTCTAGCGTTCTTTGCTGCTTC 706957 Query 43873 CGACGGGATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAG--AAGTTCAATTACCA 43930 || || ||||||||||||||||| ||| | || | |||| | |||||| | ||| Sbjct 706958 TGATGGTATAGTCAATGAAAATTTAGTTGA--GAATTTCTCAAGTGATGTTCAAATTCCA 707015 Query 43931 GAAGCACGATGTTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTAC 43990 || || |||||| |||||||| |||||| || ||||| ||||||||||||| || Sbjct 707016 GAGGCTAAATGTTTCTATGGGTTCCAAATTATGATGGAAAACATTCATTCGGAAACTTAT 707075 Query 43991 AGTCTTCTGATAGATACGTACATCAAAGATG----GGCACGAGAAGCATCGATTGTTTAA 44046 | | |||| ||||| |||||||||||| || | | ||| || || || || Sbjct 707076 TCTTTATTGATTGATACTTACATCAAAGATCCAAAGGAAAGTGAAT--TC--TTATTCAA 707131 Query 44047 TGCGATAGAAACAGTACCTGCGATTAAACATAAAGCAGACTGGGCCCTTAAATGGAT--- 44103 ||| || |||||| | || || ||| | || || || |||||| | |||||||| Sbjct 707132 TGCAATTGAAACAATCCCATGTATCAAAGAAAAGGCCGAATGGGCCTTAAAATGGATTGC 707191 Query 44104 AAATTCAAATGATTCTTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTT 44163 | || | ||| | |||| ||| | | || || ||||| | ||| ||||| ||||| Sbjct 707192 AGATAAAGATGCATTGTTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTT 707251 Query 44164 CTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTT 44223 ||| || || || ||||| |||| || ||||| || || ||||||||||||| || || Sbjct 707252 CTTCTCTGGTTCATTTGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTT 707311 Query 44224 GACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTTGCTTGCTT 44283 |||||| || || ||| | || || | |||||||| |||||| |||||||||||| || Sbjct 707312 GACGTTCTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTT 707371 Query 44284 GTTACTTGGATATCTAGGAGACGATAAGCCTTCATGTAAGACAATTACAG--ATATTGTT 44341 | | || | || | || || || | || | | || | | | ||| | || || Sbjct 707372 GCTCTTTTCACATTT--GA-ACCAT-ACCCCAGACG-AAAAAATTGTCAGACAAATCATT 707426 Query 44342 GTAGAGGCAGTAAAGATAGAACAAGAATTTATGACAACAGCATTACCTGTAAATTTAATA 44401 || || || | || ||| | ||| | || || ||||||| || || | Sbjct 707427 ACCGAAGCCGTTGATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTC 707486 Query 44402 GGAATGAATGAACTTTTGATGAACCAATATATTGAATACATTGCAGATCGTTTACTTTTG 44461 || |||||| | ||||||| || ||| | || | |||||||| | |||| | Sbjct 707487 GGTATGAATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATT 707546 Query 44462 GAACTGGGTTGCGATAA---ACACTATATTGTACAAAACCCGTTTGATTTTATGGAAAAT 44518 | | | ||||| || || | || | | ||| ||| || || || |||||||| || Sbjct 707547 GCATTAGGTTGTGAAAAGGTATACGACGT--TAC-AAATCCATTCGACTTTATGGAGAAC 707603 Query 44519 ATTTCGTTGGAAGGCAAAACAAACTTTTTTGAAAA 44553 ||||| | | || |||||||||||||| ||||| Sbjct 707604 ATTTCCCTTGCTGGTAAAACAAACTTTTTCGAAAA 707638 Score = 123 bits (136), Expect = 2e-23 Identities = 378/580 (65%), Gaps = 26/580 (4%) Strand=Plus/Plus Query 19242 AATTGGAGGATTGAGTAAAGAGTTTTCTGAAATCTTTCGTAGAGCATTTGTGTCGCGTGT 19301 ||||||||| || |||||| || ||| || || | |||||||||| || | | Sbjct 486736 AATTGGAGGTTTAGATAAAGAATTCACTGCTATTTTCAGAAGAGCATTTGCATCAAGAAT 486795 Query 19302 TTTTTCTGCAGATGTCATTAAACAATTGGG-ATGTAAACATGTTCGTGGACTTTTGCTTT 19360 || | ||| ||| ||| | || |||| ||| | || | || | || || | Sbjct 486796 CTTCCCACCAGGTGTTATTGAGAAAATGGGCATG-ACGCACATCAAAGGTATGTTACTCT 486854 Query 19361 ATGGGCCACCGGGTTGTGGAAAAACATTAATTGCGAGAGAACTTAGTAAATTACTTA--- 19417 | || || || ||| ||| ||||| || ||||| ||| || | |||| | |||| Sbjct 486855 ACGGTCCCCCTGGTACTGGTAAAACCTTGATTGCTAGACAAATCGGTAAGATGCTTAATG 486914 Query 19418 CAAAACAACCTCCCAAAATTGTAAATGGTCCTGAAATCTTAAATAAATATGTAGGTCAAT 19477 |||| |||| |||||||| || || |||||||| || || ||||| ||| || Sbjct 486915 CAAAGGAACCA---AAAATTGTCAACGGACCTGAAATTTTGTCCAAGTATGTCGGTTCAT 486971 Query 19478 CGGAAGAAAATGTACGACGTTTGTT------TGCTGACGCTGAAGAAGAACAAAAACGTT 19531 | ||||| || | || |||||| ||| || | |||| | || ||||| | | Sbjct 486972 CTGAAGAGAACATTCGTAATTTGTTCAAGGATGCAGAGGATGAATAC-AAGAAAAAGGGT 487030 Query 19532 TAGGGCGCAAAAGTTCTTTGCACATTATAATACTAGATGAATTGGACGCAATCTGTAAGC 19591 | | | | || | || ||||| || | ||||||||||| | | | || | Sbjct 487031 GATGCGTC-----TGCTCTACATATTATCATCTTTGATGAATTGGATTCCGTTTTCAAAC 487085 Query 19592 AAAGAGGTTCTGG------TGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGT 19645 |||||||||| | || || ||| || || | |||||||||||| | || Sbjct 487086 AAAGAGGTTCAAGAGGCGATGGAACTGGTGTTGCGGATAATGTTGTCAATCAGTTGTTGG 487145 Query 19646 CAAAATTAGACGGTGTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGAC 19705 | || | || ||||| | ||| | |||||||| || || ||||| |||||||||||| Sbjct 487146 CTAAGATGGATGGTGTCGATCAATTAAATAATATATTGGTCATTGGTATGACTAATAGAA 487205 Query 19706 TGGAATTAATAGACAGCGCCTTATTACGACCCGGTCGGTTGGAAATAAAGATCGAAATTA 19765 || ||||| ||||| ||| || | |||| ||| | || || | | | |||||| Sbjct 487206 GAGATTTAATTGACAGTGCCCTACTGAGACCTGGTAGATTTGAGGTTCAAGTTGAAATTC 487265 Query 19766 ACTTACCCGATGAATGTGGACGTGTGGAAATTTTAAACAT 19805 | ||||| |||||| || | || ||||||| || || Sbjct 487266 ATTTACCTGATGAAGAAGGTAGATTGCAAATTTTGAAAAT 487305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 397455946716055