Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq9 309 4e-79 seq7 95.1 1e-14 >seq9 Length=441842 Score = 309 bits (342), Expect = 4e-79 Identities = 1176/1825 (64%), Gaps = 37/1825 (2%) Strand=Plus/Plus Query 104138 AGAGACTACGACTTTGGTTATTTTGGTCTCAAAACCCTTGAGAAGAGCTATCTTCAACGG 104197 ||||||| | | | | ||||||||| ||||||| | || | ||| |||||| | | Sbjct 318934 AGAGACTTCAATTATAACTATTTTGGTTTCAAAACATTAGAAAGGAGTTATCTTTTAAGA 318993 Query 104198 CTCGATGGTGTCTTGATGGAAACCCCACAGTACATGT--TCATGCGCGTGGCCATCGGTA 104255 | ||||| | |||| || || |||| | | ||| | || ||| | |||| Sbjct 318994 ATAAATGGTAAGATTGCCGAAAGGCCCCA--ACATTTAATAATGAGAGTTGCCGTTGGTA 319051 Query 104256 TTCATGGGGAAGACATTGATTCTGTCTTGGAGACATACGACAAGATGTCCCA-AGGTATG 104314 ||||||| || || ||||||||||| | || || || | |||||| | |||||| Sbjct 319052 TTCATGGTGATGATATTGATTCTGTTATTGAAACTTATAATTTGATGTCAAAGAGGTAT- 319110 Query 104315 TTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACCAAGACCCCAAATGTCCAGT 104374 |||| || || | ||||| || |||||| | ||||| |||||| |||||||| Sbjct 319111 TTCACACATGCTTCTCCAACTCTTTTCAATTCGGGTACTCCAAGAAATCAAATGTCTTCA 319170 Query 104375 TGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTATCTATGGAACTCTTACGGAG 104434 || ||| | | || | ||||| || || || | |||||||||| ||| | | || Sbjct 319171 TGTTTCTTAGTTGCAATGAAGGACGATTCCATTGAAGGTATCTATGATACTTTGAAAGAA 319230 Query 104435 TGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCACATCCATGATGTGAGAGCC 104494 ||||| || || || ||||| ||||||||| | || || ||| || | ||| | Sbjct 319231 TGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGGTTACATATACATAATATTAGATCA 319290 Query 104495 AATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGGTATTATTCCAATGCTTCGC 104554 | | ||| |||| || || |||||| ||| |||| |||||||||||| || | Sbjct 319291 ACTGGTTCTTATATTGCCGGTACTAATGGTACATCCAATGGGATTATTCCAATGATTAGG 319350 Query 104555 GTATTTAACGCCACAGCGCGCTATGTAAATCAAGCTGGGCGTCGAAAG----GGATCTAT 104610 || ||||| ||| || | ||||| | |||| ||| | |||| || | | Sbjct 319351 GTCTTTAATAACACTGCAAGGTATGTTGACCAAGGTGGTAATA-AAAGACCTGGTGCGTT 319409 Query 104611 CGCAGTCTATCTTGAGCCATGGCACGCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAA 104670 ||| | ||| ||||||| ||||| | ||||| | || || |||| | | || Sbjct 319410 TGCACTATATATTGAGCCTTGGCATTCAGATATTCTTGATTTTATTGATATCAGGAAAAA 319469 Query 104671 CCAAGGTGACGAGGAGGCGCGGTGCCGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCT 104730 ||| ||| | || || | | ||| | ||| | ||| | |||||||| ||| | Sbjct 319470 CCACGGTAAAGAAGAAATTAGAGCAAGAGATTTATTCCCTGCTTTATGGATTCCTGATTT 319529 Query 104731 CTTCATGAAGAGAGTTGAGGAGAGTGGCAATTGGTCTCTCTTTTGTCC-AGACAAGGCAC 104789 || ||| | ||||||||| | | || ||||| || |||| | || || ||| ||| Sbjct 319530 ATTTATGGAAAGAGTTGAGAAAAATGAAGATTGGACTTTCTTCTCCCCTAGTGAAG-CAC 319588 Query 104790 CTGGTCTCTCCGATGCCGTGGGTGAGGAGTTTGAAGCCCTTTACACAAAGTACGAGGAAG 104849 ||||| | |||| ||||| || || ||| | || || || || || || Sbjct 319589 CTGGTTTGAGTGATGTATATGGTGATGAATTCAAAGAATTATATACCAAATATGAAAGAG 319648 Query 104850 AAGGTCGGGCGACTGCGACGGTGCCAGCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTC 104909 ||||| | | | || | ||| | | ||| | | || | | ||| Sbjct 319649 AAGGTAGAGGCAGGAGAACAATTAAAGCACAAAAGTTATGGTATTCGATCTTAGAAGCTC 319708 Query 104910 AAACCGAGACTGGTACACCATACATGCTTTACAAAGACGCCTGTAACCAAAAGAGTAATC 104969 |||| || ||||||||||| | |||| | || || || || |||||| | || ||||| Sbjct 319709 AAACTGAAACTGGTACACCTTTCATGTTATATAAGGATGCATGTAACAAGAAATCTAATC 319768 Query 104970 AAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTTACAG 105029 || | ||||||||||| ||||| ||||||| | || ||||| | |||| | || Sbjct 319769 AACAAAATTTGGGTGTTATCAAATCTTCCAATTTATGCTGTGAAATTGTTGAATATTCAT 319828 Query 105030 ACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTGGATC 105089 || || || || || ||||| | || | || | || | ||| || Sbjct 319829 CACCTGAGGAAACAGCAGTTTGTAATTTAGCTAGTGTTGCATTGCCTGCATTTGTTGAAA 319888 Query 105090 CAGA-GACAAAGACATTTGAT-----TATGAAAAACTCCACGAAGTTACGAAAACTGTCA 105143 || ||||| || ||| | | ||| || | || ||| |||| || ||| | Sbjct 319889 GTGATGACAAGAACTGTTGGTATAACTTTGAGAAGTTACATGAAATTACAAAGGTTGTGA 319948 Query 105144 CCAAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGTTGAGACTGCTCGTAAAT 105203 | |||||| | || | | | || |||||||| | || || ||||| ||||| | | || Sbjct 319949 CTAAAAACTTGAATAAAATCATCGATAGAAACTACTATCCTGTTGAAACTGCAAGGAGAT 320008 Query 105204 CTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATGTATTCATTC 105263 | ||||||||| || | ||||||| | | ||||| || ||| | || |||| ||||| Sbjct 320009 CAAATATGAGAAACAGACCAATTGCTGTTGGTGTCCAAGGTTTGGCAGATGCCTTCATGA 320068 Query 105264 T-TTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTTGAG 105322 | ||| || |||||||||| ||||| |||||| | ||| | || ||||| Sbjct 320069 TGTTGAGATTAC-CATTTGATTCGCCAGAAGCAAAGGAACTGAATATTCAAATTTTTGAA 320127 Query 105323 ACCATGTATCACGCCGCTCTTGAGGCGAGTTCAGAGTTGGCAG--AGGTTGATGGTCCAT 105380 ||||| ||||| || ||| | ||||| ||| || || | ||| ||||| |||| Sbjct 320128 ACCATTTATCATGCTGCTTTGGAGGCAAGTGTTGAATTATCTATTAGG--GATGGACCAT 320185 Query 105381 ATGAAACCTTTGAGGGTTCTCCAGCTTCACAAGGGGTGCTTCAATTTGATATGTGGG--A 105438 |||| || ||||| || ||||| || || ||||| | || || |||||| | |||| | Sbjct 320186 ATGAGACTTTTGAAGGATCTCCTGCATCCCAAGGTCTCCTACAGTTTGATCTTTGGGGTA 320245 Query 105439 AGGTGAGACCAAGCTTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAGAAGGG 105498 || | | | | ||| || |||||||| | | ||||| ||||||| || || Sbjct 320246 AGAAGCCAACCAACTTA--TATGACTGGGATTCATTAAAGGAGAAAATCAAGGCCAATGG 320303 Query 105499 TCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATCTTGGG 105558 | | | || | || | || |||||||| || || || || | ||||| | || Sbjct 320304 TTTGAGAAATTCATTGCTTGTTGCACCAATGCCGACTGCTTCAACATCTCAAATTCTAGG 320363 Query 105559 TAATAATGAATGCTTTGAACCCTACACGACGAACATCTA-TCTGAGAAGAACCCTCGCGG 105617 | | || |||||||||||||| ||||| | || || || ||| |||||| | || | Sbjct 320364 TTACAACGAATGCTTTGAACCTTACACTTCCAATATTTACTCT-AGAAGAGTTTTAGCCG 320422 Query 105618 GAGAGTTTGTGATTGTCAACAAGCATCTCGTGGATGACCTCAAAGAGATTGGTCTCTGGT 105677 | || || |||||||||| || | || || | || || || |||||| Sbjct 320423 GTGAATTCCAGATTGTCAACCCTTATATGTTGAGAGATTTAGTTGAAATGGGACTCTGG- 320481 Query 105678 CCAAGGA---TATGAAGGATCTCATGGTGAAAGCGGGTGGTTCCATTCAAAATATTGTGG 105734 || || |||||| | | || | || |||||| ||||| || | | Sbjct 320482 --AATGATTCTATGAAAAACCATATCATCTCAGATAATGGTTCGATTCAGAACTTACCGA 320539 Query 105735 ATATTCCAAATGAAATTAAGAAGTTGTACCGCACAGTTTGGGAAATCAAGATGAAGGATG 105794 ||||||| | || || ||| | || || || || ||||| ||| | ||| Sbjct 320540 ATATTCCTCAAGAGATCAAGGACTTATATAAGACTGTCTGGGAGATCTCGCAAAAGACAA 320599 Query 105795 TCATTGACATGGCCGCAGATCGTGGTCGCTTCATTGATCAAAGTCAAAGTATGAATCTCT 105854 | || || ||||| || ||| | ||| | | | ||||| ||| |||||| || Sbjct 320600 TTATCGATATGGCTGCTGATAGAGGTGCATACGTGGATCAGTCACAATCTATGAACATCC 320659 Query 105855 TCATGGAAAGTCCAACGATGTCCAAGCTCTCTTCTATGCACATGTACAGTTGGAAGAAGG 105914 || ||| |||||| ||| || | | || ||||| | || |||||||||||| Sbjct 320660 ATTTGAAAAATCCAACAATGGGTAAATTAACGTCCATGCATTTCTATGGTTGGAAGAAGG 320719 Query 105915 GTCTCAAAACGGGGATGTATTACCT 105939 | ||||| || || ||||||||||| Sbjct 320720 GGCTCAAGACAGGTATGTATTACCT 320744 >seq7 Length=736534 Score = 95.1 bits (104), Expect = 1e-14 Identities = 339/515 (66%), Gaps = 20/515 (4%) Strand=Plus/Plus Query 94730 AAACAGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTTG-ATACAAAG 94788 ||||| | || ||||| || | || || || ||||| | || ||| ||| | | |||| Sbjct 707140 AAACAATCCCATGTATCAAAGAAAAGGCCGAATGGGCCTTAAAATGGATTGCAGATAAAG 707199 Query 94789 TCGCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCT 94848 || || ||||| ||| | | | |||||||| |||||| ||||| ||||||||| Sbjct 707200 ATGCATTG-TTTGCAGAGAGGTTGGTGGCATTTGCTGCTGTTGAAGGTATTTTCTTCTCT 707258 Query 94849 GGTTCCTTCTGC-GCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTT 94907 ||||| || ||| | || | ||| | || ||| ||||| | ||||||||| | || Sbjct 707259 GGTTCATT-TGCATCCATCTTCTGGTTGAAAAAGAGAGGTTTGATGCCAGGTTTGACGTT 707317 Query 94908 CTCCAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC--GGTGGAACTT 94965 |||||||||||| || | | | || || || | || || ||||| | | | ||| Sbjct 707318 CTCCAACGAGCTGATTTGTAGAGATGAAGGTTTACATACCGATTTTGCTTGTTTGCTCTT 707377 Query 94966 TTCAAATTATTGCGTATTAAACCA-ACGACTGAGACTATTCATTC-TATTGTTAAGGAAG 95023 |||| || ||| || ||| |||| | | | ||| | || ||| |||| Sbjct 707378 TTCACAT--TTGAACCATACCCCAGACGA--AAAAATTGTCAGACAAATCATTACCGAAG 707433 Query 95024 CCGTTGAGATTGAGAAAGGATTCATATTGGATGCCCTTCCATGCGCTCTCATCGGTATGA 95083 ||||||| ||||| || || | | || ||||| || | | ||||||||| Sbjct 707434 CCGTTGATATTGAAAAGAAATACTTCACTGACGCCCTACCTGTCAACTTGCTCGGTATGA 707493 Query 95084 ATTCTGAAAAAATGTCTGAATATATTGAGTATGTATCTGATAGATTGTTGA-AGCAGATC 95142 || || |||| | | ||| | |||| ||| | |||||| | ||| || || Sbjct 707494 ATAAGGATTTGATGTGTCAGTATGTCGAGTTTGTTGCAGATAGACTACTGATTGC--ATT 707551 Query 95143 GGGGTGCCTCCAA---TTTGGAACTCCAAGAATCCATTTGACTTCATGGAGAACATTAGC 95199 || || | || | | || | |||||||| ||||| |||||||||||| | Sbjct 707552 AGGTTG--TGAAAAGGTATACGACGTTACAAATCCATTCGACTTTATGGAGAACATTTCC 707609 Query 95200 CTCGACGGGAAGACAAACTTCTTCGAAAAGAGGGT 95234 || | || || |||||||| ||||||||||| || Sbjct 707610 CTTGCTGGTAAAACAAACTTTTTCGAAAAGAGAGT 707644 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583260719801640