Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_028491.1
Length=98392
Score E
Sequences producing significant alignments: (Bits) Value
seq4 104 1e-17
seq5 95.1 8e-15
>seq4
Length=1293945
Score = 104 bits (114), Expect = 1e-17
Identities = 160/227 (70%), Gaps = 1/227 (0%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| ||||| || |||||| || ||||| || || ||
Sbjct 738111 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738170
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | |||| || ||||||||||| || || || | | ||| ||||| || ||
Sbjct 738171 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738230
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACT 34659
| ||||||||||| |||| || | || || | ||| ||||| ||||||
Sbjct 738231 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACATTTCAATGGTGTCGGATGACTCCACC 738289
Query 34660 TCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || |||| || || ||||| ||||||||
Sbjct 738290 TCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738336
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| ||||| || |||||| || ||||| || || ||
Sbjct 738338 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738397
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | |||| || ||||||||||| || || || | | ||| ||||| || ||
Sbjct 738398 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738457
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || || ||| ||||| ||||||
Sbjct 738458 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACATTATCAATGGTGTCGGATGACTCCAC 738516
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || |||| || || ||||| ||||||||
Sbjct 738517 CTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| ||||| || |||||| || ||||| || || ||
Sbjct 738566 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738625
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | |||| || ||||||||||| || || || | | ||| ||||| || ||
Sbjct 738626 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738685
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || || ||| ||||| ||||||
Sbjct 738686 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACATTATCAATGGTGTCGGATGACTCCAC 738744
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || |||| || || ||||| ||||||||
Sbjct 738745 CTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| ||||| || |||||| || ||||| || || ||
Sbjct 738794 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 738853
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | |||| || ||||||||||| || || || | | ||| ||||| || ||
Sbjct 738854 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738913
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || || ||| ||||| ||||||
Sbjct 738914 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACATTATCAATGGTGTCGGATGACTCCAC 738972
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || |||| || || ||||| ||||||||
Sbjct 738973 CTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020
Score = 102 bits (112), Expect = 5e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| ||||| || |||||| || ||||| || || ||
Sbjct 739022 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 739081
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | |||| || ||||||||||| || || || | | ||| ||||| || ||
Sbjct 739082 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 739141
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || || ||| ||||| ||||||
Sbjct 739142 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACATTATCAATGGTGTCGGATGACTCCAC 739200
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || |||| || || ||||| ||||||||
Sbjct 739201 CTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248
Score = 98.7 bits (108), Expect = 6e-16
Identities = 160/228 (70%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| ||||| || |||||| || ||||| || || ||
Sbjct 737883 CCACCTCTTAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 737942
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | |||| || ||||||||||| || || || | | ||| ||||| || ||
Sbjct 737943 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 738002
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || | ||| ||||| ||||||
Sbjct 738003 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACATTGTCAATGGTGTCGGACGACTCCAC 738061
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || |||| || || ||||| ||||||||
Sbjct 738062 CTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109
Score = 95.1 bits (104), Expect = 8e-15
Identities = 160/228 (70%), Gaps = 3/228 (1%)
Strand=Plus/Plus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| ||||| ||||| || |||||| || ||||| || || ||
Sbjct 739450 CCACCTCTCAATCTCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 739509
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
||||| | |||| || ||||||||||| || || | ||| || ||||| || ||
Sbjct 739510 AGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAA-AATAAGTCTTGCTGGTCTGGTGGA 739568
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCAC 34658
| ||||||||||| |||| || | || || || ||| ||||| ||||||
Sbjct 739569 ATACCCTCCTTGTCCTGGATC-TTCGACTTGACATTATCAATGGTGTCGGATGACTCCAC 739627
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706
|||| || || ||||| || |||| || || ||||| ||||||||
Sbjct 739628 CTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739675
>seq5
Length=1193180
Score = 95.1 bits (104), Expect = 8e-15
Identities = 161/231 (70%), Gaps = 2/231 (1%)
Strand=Plus/Minus
Query 34480 CCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAA 34539
|| ||||| | | ||| || || || ||||| |||||||||||||| || || ||
Sbjct 1151962 CCACCTCTTAATCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGAC 1151903
Query 34540 AGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGC 34599
| |||| | ||||| | ||| ||||| ||||| || | | |||||||| || ||
Sbjct 1151902 AAAGTTCTACCATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGA 1151843
Query 34600 ACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCAC 34658
| || ||||||||| ||| ||| | || || | || ||||| ||| ||
Sbjct 1151842 ATACCTTCCTTGTCTTGGAT-TTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGAC 1151784
Query 34659 TTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATGTT 34709
||| | ||| || || ||||| ||||| ||||| |||||||| ||||| ||
Sbjct 1151783 TTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTT 1151733
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 314729557806563
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |