Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq6 161 2e-34 seq5 136 9e-27 seq4 132 1e-25 >seq6 Length=742668 Score = 161 bits (178), Expect = 2e-34 Identities = 167/219 (76%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | |||||| || || || ||||||||||| || || | | || || || Sbjct 86767 TCTCAAGACCAAGTGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACC 86708 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| ||||| |||||||| | |||||||||||| |||| |||||||| Sbjct 86707 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 86648 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 || ||||||||||| || || || |||||||||||||| |||||| || | || || Sbjct 86647 ATCTTGGATCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAAT 86588 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 ||||| || || | ||||| ||||| | ||||| || Sbjct 86587 GGTCTTACCGGTTAAGGTCTTGACAAAAATTTGCATCTT 86549 >seq5 Length=1193180 Score = 136 bits (150), Expect = 9e-27 Identities = 162/220 (74%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 210899 TCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCC 210958 ||| | ||| | ||||||||| || || ||||| ||||| || || | | || || || Sbjct 1151951 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1151892 Query 210959 ATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTT 211018 |||||| | ||||| ||||| |||||||| | |||||||||||| |||| |||||||| Sbjct 1151891 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 1151832 Query 211019 GTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGAT 211078 ||| ||||| || || || || ||||| |||||||| || || || | || || Sbjct 1151831 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 1151772 Query 211079 CGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTTA 211118 ||||| || || | ||| || ||||| | ||||| ||| Sbjct 1151771 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1151732 >seq4 Length=1293945 Score = 132 bits (146), Expect = 1e-25 Identities = 164/222 (74%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || |||| || ||||| || || || || || Sbjct 739473 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 739532 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | ||| ||||| || |||| || ||||||||||||||||| Sbjct 739533 TTTACCAGCGAAAATAAGTC-TTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 739591 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || |||||||| || || ||||| | ||||| || || || || Sbjct 739592 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 739651 Query 211091 GAGAGTCTTTACAAACACCTGCATTT-TATGGTTACTTGATG 211131 || ||||| ||||| | |||||||| ||| ||| || ||| Sbjct 739652 TAGTGTCTTGACAAAGATCTGCATTTCTATAGTTGGTTTATG 739693 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || |||| || ||||| || || || || || Sbjct 737906 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 737965 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | || ||||| || |||| || ||||||||||||||||| Sbjct 737966 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 738025 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || |||||||| || || ||||| | ||||| || || || || Sbjct 738026 CGACTTGACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGATTGTTTTGCCTGT 738085 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | |||||| Sbjct 738086 TAGTGTCTTGACAAAGATCTGCAT 738109 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || |||| || ||||| || || || || || Sbjct 738361 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 738420 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | || ||||| || |||| || ||||||||||||||||| Sbjct 738421 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 738480 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || |||||||| || || ||||| | ||||| || || || || Sbjct 738481 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 738540 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | |||||| Sbjct 738541 TAGTGTCTTGACAAAGATCTGCAT 738564 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || |||| || ||||| || || || || || Sbjct 738589 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 738648 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | || ||||| || |||| || ||||||||||||||||| Sbjct 738649 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 738708 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || |||||||| || || ||||| | ||||| || || || || Sbjct 738709 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 738768 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | |||||| Sbjct 738769 TAGTGTCTTGACAAAGATCTGCAT 738792 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || |||| || ||||| || || || || || Sbjct 738817 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 738876 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | || ||||| || |||| || ||||||||||||||||| Sbjct 738877 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 738936 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || |||||||| || || ||||| | ||||| || || || || Sbjct 738937 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 738996 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | |||||| Sbjct 738997 TAGTGTCTTGACAAAGATCTGCAT 739020 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || |||| || ||||| || || || || || Sbjct 739045 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 739104 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | || ||||| || |||| || ||||||||||||||||| Sbjct 739105 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 739164 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || || || |||||||| || || ||||| | ||||| || || || || Sbjct 739165 CGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 739224 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | |||||| Sbjct 739225 TAGTGTCTTGACAAAGATCTGCAT 739248 Score = 122 bits (134), Expect = 2e-22 Identities = 150/204 (74%), Gaps = 1/204 (0%) Strand=Plus/Plus Query 210911 GTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCTTCCAGCTG 210970 ||| || || ||||| || |||||||| || |||| || ||||| || || || || || Sbjct 738134 GTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTG 738193 Query 210971 CTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCCTGGATCTT 211030 || || ||||| ||||| | || ||||| || |||| || ||||||||||||||||| Sbjct 738194 TTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTT 738253 Query 211031 TTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTCTTTCCCGT 211090 || || |||| |||||||| || || ||||| | ||||| || || || || Sbjct 738254 CGACTTGAC-ATTTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGT 738312 Query 211091 GAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| | |||||| Sbjct 738313 TAGTGTCTTGACAAAGATCTGCAT 738336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159151836632015