Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq9 508 8e-139 seq7 242 5e-59 seq3 105 9e-18 >seq9 Length=441842 Score = 508 bits (562), Expect = 8e-139 Identities = 1388/2100 (66%), Gaps = 47/2100 (2%) Strand=Plus/Minus Query 76818 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTCAGT 76877 || || |||||||| || || || ||| |||| || |||||||||||| || | | Sbjct 320744 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 320685 Query 76878 TTGGAATAACTAGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 76937 || | |||| | ||| || ||||| || || ||||| | | | || Sbjct 320684 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 320625 Query 76938 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 76997 ||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || | Sbjct 320624 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 320565 Query 76998 ACTTGTTTGATATCATCTGGAAGGTTTG-TA--TTTTGAATGGAACCACCATCTGATATA 77054 | | ||||| || | |||| || | || || ||||| |||||| |||||| || Sbjct 320564 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 320505 Query 77055 ATTGTATTCTTTATATCATCATTCCACAATTTCCTCTCTGTTAAAACTCTAAGGAGATGA 77114 || || || ||| ||||||||| | | | | || |||| |||| | | || | Sbjct 320504 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 320445 Query 77115 GGATTAACTATTTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATAT 77174 || || || || || ||||| || | || ||||| | || ||||||||| || || Sbjct 320444 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 320385 Query 77175 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTAGAAGCAGTTGGCATAGGTGCC 77234 ||||| | |||| |||| || | |||||||| || |||||||| ||||| ||||| Sbjct 320384 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 320325 Query 77235 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 77294 || | || |||||| | ||||| | ||||||| || |||| | | ||| || Sbjct 320324 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 320265 Query 77295 CAAAGATCTGAAGGTACAACATCCCAAAGATCGTATTGTAGAATTCCGTTACTAGCATAT 77354 | | | | || | |||||||||| | ||||| | || | ||| Sbjct 320264 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 320205 Query 77355 GATCCATTATATGTTTCATAAGGTCCTTCTGTTTCAGCTAGTTCACAACTCGCTTCCAAT 77414 ||||| | | | || ||||| ||||| || | || || |||| ||| || ||||| Sbjct 320204 GATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAA 320145 Query 77415 GCTCCGTAATAAATTGTTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCAATACTATCA 77474 || | | |||||| ||||| ||||| | |||| || || | |||||| |||| Sbjct 320144 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 320085 Query 77475 AACGGATAATGTAAA-AGAATAAAGGCATCTGCTAATCCCTGAACTCCAATACCAATAGG 77533 || || |||| | || | || ||||||||||| || || || || |||| | |||| || Sbjct 320084 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 320026 Query 77534 TCTATGTCTCTTATTGGAAATTTTAGCTTCTGGAATAGGATAATAATTAATGTCTATAAT 77593 ||| | |||| |||| || | | || | || |||||| || || | || || || Sbjct 320025 TCTGTTTCTCATATTTGATCTCCTTGCAGTTTCAACAGGATAGTAGTTTCTATCGATGAT 319966 Query 77594 TTTATTGAGATTTCTA---ACAACTACTTTAAC--CACGTCCTTT-----AGTTTAAGAA 77643 |||||| | ||| || ||||| | ||| || || || |||| | | Sbjct 319965 TTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATACCA 319906 Query 77644 AATCAAATCTTC-CATCTAT---AACAAA--CATGTTCAAAGCTATAGATGCTAGATTAC 77697 | || |||| |||| | |||||| || | ||| || | | |||| ||||| Sbjct 319905 A--CAGTTCTTGTCATCACTTTCAACAAATGCAGG--CAATGCAACACTAGCTAAATTAC 319850 Query 77698 AAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGATTACTACATT 77757 |||||||| || | || | ||||| | || || |||| ||| | ||| Sbjct 319849 AAACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATT 319790 Query 77758 TGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTATAAAGAATAA 77817 ||||| |||| ||||||||| || || || || |||| |||||||| | || | Sbjct 319789 TGATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGA 319730 Query 77818 ACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTT 77875 | || || || |||||| | || | ||| | || || | ||| | ||| | | |||| Sbjct 319729 AAGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTT 319672 Query 77876 TATCATAGATTTGTATCGCCTCTCTCTTTCATATTGAGTATATAGCCGTTCAAATTCATC 77935 || | || || | ||||||||||||| ||||||| || |||||||| Sbjct 319671 AATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATC 319612 Query 77936 TCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACCAGTCACCATC 77995 || | |||||| ||| ||||| |||| | ||| | | || | ||| || ||| Sbjct 319611 ACCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATT 319552 Query 77996 TTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGT 78055 || || ||||| || |||||| | |||||| ||||||| |||| |||| ||||| | Sbjct 319551 TTTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGC 319492 Query 78056 TCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATG 78115 |||| |||||| || || || || | | ||| | ||| || | |||||| ||||| Sbjct 319491 TCTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATG 319432 Query 78116 CCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCTGATCTATATA 78175 ||| || || | ||||| ||| | | ||||||| ||||||||| || || || | ||| Sbjct 319431 CCAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATA 319372 Query 78176 TCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGT 78235 || || ||||||||| | || || | |||||||||||| || || ||||| ||||| || Sbjct 319371 CCTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGT 319312 Query 78236 TCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTATTCCTCCTGC 78295 || | ||||||| ||| ||| | ||||||| || || ||| || || || || Sbjct 319311 ACCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGC 319252 Query 78296 CATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 | || || || | ||| || |||||| ||||| |||||||| || || || || Sbjct 319251 AGTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTC 319192 Query 78356 CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA 78415 | |||| || | ||||| ||||||||||| ||| || | ||| || | Sbjct 319191 CTTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAG 319132 Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGA 78475 || ||||| ||||| || || | | | || | | ||| || ||||||||| | || Sbjct 319131 AGTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGA 319072 Query 78476 TTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGGTCTTTC 78535 || || || |||||| || || || || | ||| | | ||| || || ||||| Sbjct 319071 ATCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTC 319012 Query 78536 AACCGTCTTATTATTTATTTTCAACAAGTATGATT--TTTCCAAAGTTTTAAAACCAAAA 78593 | ||||| ||||||| | || ||| || | | |||| || ||||| ||||||||| Sbjct 319011 GGCAATCTTACCATTTATTCTTAA-AAG-ATAACTCCTTTCTAATGTTTTGAAACCAAAA 318954 Query 78594 TAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAGTTTAT---CTTTGTAT 78650 ||||| || |||||||| || ||| ||| || || || | ||| | || | | Sbjct 318953 TAGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATT-TTT 318895 Query 78651 TTGGTAACAATAT-CCATGACAGTAGTTGAAATAATAGGAGATCGTACACCATTTTTAGG 78709 |||| ||||| | ||| | | ||||||| || |||| || |||||||||||| Sbjct 318894 TTGG--ACAATTTCCCAAGTC-TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGG 318838 Query 78710 ATTAACATAGTTAAATAAATCTTCCATTACATCACTAAATAGtttttttGTTTCCTTGTG 78769 || || ||| || ||| | | | || ||| ||| || |||||| ||| || Sbjct 318837 ATCAATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTG 318778 Query 78770 TAGATTAGATACAGCTATTCTTGCAGCTAGAATAGCATAATCAGGATG--TTG-TGTAGT 78826 || || || | || | ||| ||||| | | |||||||| ||||| | | ||| | Sbjct 318777 TAAGTTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGTCAT 318718 Query 78827 ACAAGTGGCTGCTATTTCTGCCGCTAAAATATCTAACTCTATAGTTGTGACCCCATTATA 78886 | || || || |||| || |||||| ||||||| || | |||||| || |||| ||| Sbjct 318717 ATAA---GCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 318661 >seq7 Length=736534 Score = 242 bits (268), Expect = 5e-59 Identities = 580/867 (67%), Gaps = 20/867 (2%) Strand=Plus/Minus Query 47871 TTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTTTCCATAAAATCAAATGGATTA 47930 || |||||||| || ||||| || | | || || || |||||||| || |||||||| Sbjct 707638 TTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTCTCCATAAAGTCGAATGGATTT 707579 Query 47931 ACTGCATTATAAAtttttttAAATCCTAATTCTGAAATCAGT---CTATCTGCAACGAAT 47987 | | || | |||| | | |||||| | ||||||| ||||||||||| || Sbjct 707578 GTAACGTCGTATACCTTTTCACAACCTAATGC---AATCAGTAGTCTATCTGCAACAAAC 707522 Query 47988 TCTATATATCTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGTAGAGCCTCC 48047 || | ||| ||||| || |||||| || | | || || ||||| || || Sbjct 707521 TCGACATACTGACACATCAAATCCTTATTCATACCGAGCAAGTTGACAGGTAGGGCGTCA 707462 Query 48048 GT-AAGAAACTCTTGTTCGATAGTGACAGCATCCACTATTATCGATGTTACCGTTTCCTC 48106 || ||| | |||| ||| ||| || || || || || | | || ||| || Sbjct 707461 GTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAATGATTTGTCTGACAATTTTTTC 707403 Query 48107 ACTTGGTGGATACAACAAATGTTTAAACATTAAACATGCAAAATCACAATGAAGACCTTC 48166 ||| | || ||||||| ||| | ||||| |||||||| ||| | |||||| Sbjct 707402 GTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGCAAAATCGGTATGTAAACCTTC 707343 Query 48167 ATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTTTTGAG 48226 |||||||| ||| | ||||| || || || | ||| ||||| | || | ||||| | Sbjct 707342 ATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGGCATCAAACCTCTCTTTTTCAA 707283 Query 48227 CCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAATGCGGT 48286 ||| || || | || || || ||||| ||||| || ||||| || || |||||||| Sbjct 707282 CCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACCTTCAACAGCAGCAAATGCCAC 707223 Query 48287 AAGTCTCTCTCCGTAACTGGCTTCGTTGTGT---ATCCACCGTTGTGCCCAATCAGCCTT 48343 | |||||| | | || || || | | ||||| | ||||| || ||||| Sbjct 707222 CAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCATTTTAAGGCCCATTCGGCCTT 707163 Query 48344 CTTCTTT-ACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTGCTAT 48402 |||||| | ||| || |||||||| || ||||| || | || | |||| || || Sbjct 707162 -TTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAAGAATTCACTTTCCTTTGGAT 707104 Query 48403 CTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCCA 48462 |||| | ||||||||| || || | | ||| |||| || ||||| ||||| || | Sbjct 707103 CTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGAATGAATGTTTTCCATCATAA 707044 Query 48463 TCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGT--ACAAAATCGTTC 48520 | || || || || |||||| | || |||| || || || || | | ||| || || Sbjct 707043 TTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAACATCACTTGAGAAATTC--TC 706986 Query 48521 AGCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAAT 48580 | | ||||| ||||| ||||| |||||| ||||||||| || |||| || | ||| Sbjct 706985 AACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAGAACGCTAGAACTCTTGAAAT 706926 Query 48581 AAAATATTTTTCGTTGGAAGTCAGT---TTATTCCAGTCATTGATATCTTTTGATATATC 48637 || || |||| || ||| | || ||||| |||| | |||||| || | ||| Sbjct 706925 GAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCATGCAAATCTTTGGAGAGATC 706866 Query 48638 TACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCATATATCACT 48697 | ||| || || ||||| || ||||| ||||| || || ||||| | ||| || || Sbjct 706865 AATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTGTACATTTGCCAAATTTCGTG 706806 Query 48698 GTATTGGATTGGGAAAATAACAAATCT 48724 || | |||||| || | |||||| || Sbjct 706805 ATACTTGATTGGAAAGAGAACAAACCT 706779 >seq3 Length=1364687 Score = 105 bits (116), Expect = 9e-18 Identities = 181/260 (70%), Gaps = 2/260 (1%) Strand=Plus/Minus Query 78011 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTATGTTCTTCATT 78070 |||||| | ||| || ||||||||||||||||||| ||||| | ||| |||||| || Sbjct 699411 CATAAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 699352 Query 78071 TCCTGTATTCTTTTTAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTCTAGATA 78130 || |||||| | | || |||||| || | || |||| ||||||||| |||| ||| Sbjct 699351 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 699292 Query 78131 TATTGCCATA-ACTCCAGGTCGTTTATTACCTCCCTGATCTATATATCTGGCGGTGTTAT 78189 || ||| | | | || |||| ||| || || ||||| || | |||| || || || Sbjct 699291 TA-TGCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 699233 Query 78190 TATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCAGAAATATAAC 78249 | | ||| | ||||| || || | |||| || | ||||| | || || ||| Sbjct 699232 TGAATACTTTTAACATAGGGATTAAACCGGATGAAATCCCATTACTACCGTTGATGTAAG 699173 Query 78250 TTCCACTTGCGCGAATATTA 78269 | ||||| || | |||||| Sbjct 699172 TACCACTGGCTCTTATATTA 699153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694668704483040