Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq9 486 3e-132 seq7 300 2e-76 seq3 100 4e-16 >seq9 Length=441842 Score = 486 bits (538), Expect = 3e-132 Identities = 1376/2094 (66%), Gaps = 35/2094 (2%) Strand=Plus/Minus Query 75413 AGATAGTACATACCAGTTTTTAGACCCAGACTCCATCCGTAGAAATGCATGCTTGTTAGT 75472 || || |||||||| || || || ||| |||| || |||||||||||| |||| | Sbjct 320744 AGGTAATACATACCTGTCTTGAGCCCCTTCTTCCAACCATAGAAATGCATGGACGTTAAT 320685 Query 75473 TTGGAATAACTCGGATCGGCTATATGAATATTCATCGACTGACTTTGATCGATGAAAGCT 75532 || | |||| | ||| || ||||| || || ||||| | | | || Sbjct 320684 TTACCCATTGTTGGATTTTTCAAATGGATGTTCATAGATTGTGACTGATCCACGTATGCA 320625 Query 75533 CCTCTATCAGCCGCCATTTTTATAATGGTCTTTTGAGGAATTTCCCAAATAGTTTTGAAA 75592 ||||||||||| ||||| | ||||| |||||||| | || ||||| | ||| || | Sbjct 320624 CCTCTATCAGCAGCCATATCGATAATTGTCTTTTGCGAGATCTCCCAGACAGTCTTATAT 320565 Query 75593 ACTTGTTTGATATCATCTGGAAGATTTG-TA--TTTTGAATGGATCCGCCATCAGATATA 75649 | | ||||| || | |||| ||| | || || ||||| || || ||| || || Sbjct 320564 AAGTCCTTGATCTCTTGAGGAATATTCGGTAAGTTCTGAATCGAACCATTATCTGAGATG 320505 Query 75650 ATTGTATTCTTGATCTCATCATTCCACAATTTTCTCTCGGTTAAAACTCTAAGGAGATGA 75709 || || || || ||||||||| | | | || |||| |||| | | || | Sbjct 320504 ATATGGTTTTTCATAGAATCATTCCAGAGTCCCATTTCAACTAAATCTCTCAACATATAA 320445 Query 75710 GGATTAACAATTTGAAATTCTCCAGACAATACTCTTCGAGTGTAAATATTACTGGTATAT 75769 || || ||||| || ||||| || | || ||||||| || ||||||||| || || Sbjct 320444 GGGTTGACAATCTGGAATTCACCGGCTAAAACTCTTCTAGAGTAAATATTGGAAGTGTAA 320385 Query 75770 GGTTCCACAGATTCATTGTTTCCCAAAATTTGAGCAGTTGAAGCAGTCGGCATAGGTGCC 75829 ||||| | |||| |||| || | |||||||| ||||||||||||||||| ||||| Sbjct 320384 GGTTCAAAGCATTCGTTGTAACCTAGAATTTGAGATGTTGAAGCAGTCGGCATTGGTGCA 320325 Query 75830 ACCAATAAACTATTTCTGAGACCATGTGTTCTGATTTTATCTTTTAGATATTTCCAATCC 75889 || | || |||||| | ||||| | ||||||| || |||| | | ||| || Sbjct 320324 ACAAGCAATGAATTTCTCAAACCATTGGCCTTGATTTTCTCCTTTAATGAATCCCAGTCA 320265 Query 75890 CAAAGATCTGATGGTACAACATCCCAGAGATCGTATTGTAGAATTCCGTTGCTAGCATAT 75949 | | | | ||| | |||| ||||| | ||||| | || | | ||| Sbjct 320264 TATAAGTTGGTTGGCTTCTTACCCCAAAGATCAAACTGTAGGAGACCTTGGGATGCAGGA 320205 Query 75950 GATCCATTATATGTTTCGTAAGTCCCGTCCTTTTCAGCTAGTTCGCAACTCGCCTCTAAC 76009 ||||| | | | || || || | || ||| | || || ||| ||| ||||| || Sbjct 320204 GATCCTTCAAAAGTCTCATATGGTCCATCCCTAATAGATAATTCAACACTTGCCTCCAAA 320145 Query 76010 GCACCGTAATAAATTGTTTCGAAAATCTTCTTATTAAGATCTTGCGCTTCAAGACTATCA 76069 ||| | | |||||| ||||| ||||| | |||| || || | ||||| | |||| Sbjct 320144 GCAGCATGATAAATGGTTTCAAAAATTTGAATATTCAGTTCCTTTGCTTCTGGCGAATCA 320085 Query 76070 AAAGGATAATGTAAA-AGAATAAATGCATCTGCTAGTCCCTGAACTCCAATACCAATAGG 76128 || || |||| | || | || || |||||||| | || || || |||| | |||| || Sbjct 320084 AATGG-TAATCTCAACATCATGAAGGCATCTGCCAAACCTTGGACACCAACAGCAATTGG 320026 Query 76129 TCTATGTCTCTTATTGGAAAT---TTCAGCTTCTGGAATAGGGTAATAATTAATATCTAT 76185 ||| | |||| |||| || | | ||| ||| || ||| || || || |||| || Sbjct 320025 TCTGTTTCTCATATTTGATCTCCTTGCAGTTTC---AACAGGATAGTAGTTTCTATCGAT 319969 Query 76186 AATTTTATTGAGATTTCTGACAACTACTTTAACCACGTCCTTTAGTTTGAGAAAATCA-- 76243 |||||||| | ||| | || || || | || | || || ||| | | Sbjct 319968 GATTTTATTCAAGTTTTTAGTCACAACCTTTGTAATTTCATGTAACTTCTCAAAGTTATA 319909 Query 76244 --AATTTTCCATCT-ATCACA---AACATATTAAGA----GCTATAGATGCTAGATTACA 76293 || | | | | ||||| |||| || || || | | |||| |||||| Sbjct 319908 CCAACAGTTCTTGTCATCACTTTCAACAAATGCAGGCAATGCAACACTAGCTAAATTACA 319849 Query 76294 AACGGCTACCTCATTAGCATTGGCATATTGTATTATCTCCGTGCATAGATTACTACACTT 76353 ||| ||| || | || | ||||| | || || ||||| ||| | | || Sbjct 319848 AACTGCTGTTTCCTCAGGTGATGAATATTCAACAATTTCACAGCATAAATTGGAAGATTT 319789 Query 76354 GATAGTTCCAAGATTTTGTTGGTTGCTCTTTTTGTTACATGAGTCCTTATAAAGAACAAA 76413 |||| || | ||||||||| || || |||||||||| |||||||| | | || Sbjct 319788 GATAACACCCAAATTTTGTTGATTAGATTTCTTGTTACATGCATCCTTATATAACATGAA 319729 Query 76414 CGGAGTTCCAGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACTCTAG--CTTTT 76471 || || ||||||||| | || | ||| | || || | ||| | ||| | | |||| Sbjct 319728 AGGTGTACCAGTTTCAGTTTGAGCTTCTAAGATCGAATACCATA--ACTTTTGTGCTTTA 319671 Query 76472 ATTATAGATTTGTATCGCTTCTCTCTTTCATATTGTGTATATAACCGTTCAAATTCATCT 76531 ||| | || || ||||||||||||| |||||||| || |||||||| Sbjct 319670 ATTGTTCTCCTGCCTCTACCTTCTCTTTCATATTTGGTATATAATTCTTTGAATTCATCA 319611 Query 76532 CCCCAAACATCATCCAAACCAGGACATTCATTCGGACACATCAATGACCACTCACCATCT 76591 || | |||||| ||||||||| |||| | || | | || | ||| || ||| | Sbjct 319610 CCATATACATCACTCAAACCAGGTGCTTCACTAGGGGAGAAGAAAGTCCAATCTTCATTT 319551 Query 76592 TCCTTAACCCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTT 76651 | || ||| | || |||||| | |||||| ||||||| |||| |||| ||||| | | Sbjct 319550 TTCTCAACTCTTTCCATAAATAAATCAGGAATCCATAAAGCAGGGAATAAATCTCTTGCT 319491 Query 76652 CTACGTTCTTCATTTCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGC 76711 ||| |||||| || || || || | | ||| | || || | |||||| |||||| Sbjct 319490 CTAATTTCTTCTTTACCGTGGTTTTTCCTGATATCAATAAAATCAAGAATATCTGAATGC 319431 Query 76712 CATGGTTCTAGATATATCGCCATAACACCCGGTCGTTTATTACCTCCCTGATCTATATAT 76771 || || || | ||||| || | |||| |||| ||||||||| || || || | ||| Sbjct 319430 CAAGGCTCAATATATAGTGCAAACGCACCAGGTCTTTTATTACCACCTTGGTCAACATAC 319371 Query 76772 CTGGCAGTGTTATTATAAACTCTCAACATTGGAATAATGCCGTTAGATGTACCATTTGTT 76831 || |||||||||||| | || || | |||||||||||| || || ||||||||||| || Sbjct 319370 CTTGCAGTGTTATTAAAGACCCTAATCATTGGAATAATCCCATTGGATGTACCATTAGTA 319311 Query 76832 CCAGAAATATAACTTCCACATGCACGAATATTACTAATAGATAGGCCTATTCCTCCTGCC 76891 || | ||||||| ||| || | ||||||| ||| || || || || || || Sbjct 319310 CCGGCAATATAAGAACCAGTTGATCTAATATTATGTATATGTAACCCAATACCACCAGCA 319251 Query 76892 ATTTTAGAGATTAGAGCACAGCGTTTCAATGTGTCATAGATGCCCTCTATACTATCATCC 76951 |||| || || | |||||| |||||| || |||||||| || || || ||| ||| Sbjct 319250 GTTTTGGAAATCAAAGCACATTCTTTCAAAGTATCATAGATACCTTCAATGGAATCGTCC 319191 Query 76952 ATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAACAAT 77011 |||| || | ||||| ||||||||||| ||| || | ||| || | Sbjct 319190 TTCATTGCAACTAAGAAACATGAAGACATTTGATTTCTTGGAGTACCCGAATTGAAAAGA 319131 Query 77012 GTAGGAGATGCATGAGTGAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAACTGCT 77071 || ||||| ||||| ||||| | | | || | | ||| || ||||||||||| | Sbjct 319130 GTTGGAGAAGCATGTGTGAAATACCTCTTTGACATCAAATTATAAGTTTCAATAACAGAA 319071 Query 77072 TCTATATCCCATTGATGAATTCCTACAGCGACACGCATCAACATATGCTGAGGTCGTTCT 77131 || ||||| |||||| || || || || | ||| | | ||| || || | ||| Sbjct 319070 TCAATATCATCACCATGAATACCAACGGCAACTCTCATTATTAAATGTTGGGGCCTTTCG 319011 Query 77132 ACAGTCTTATTATTTATTTTCAACAAGTATGATT--TTTCCAAAGTTTTAAAACCAAAAT 77189 || ||||| ||||||| | || ||| || | | |||| || ||||| |||||||||| Sbjct 319010 GCAATCTTACCATTTATTCTTAA-AAG-ATAACTCCTTTCTAATGTTTTGAAACCAAAAT 318953 Query 77190 AGTTGTATGAAAAGTCTCTTTCGTAAATAATAACCGAATTTAGTTTGTCCTTATATTTGG 77249 |||| || |||||||| || ||| ||| | || || | | | | || ||| Sbjct 318952 AGTTATAATTGAAGTCTCTATCATAATGAATTGCATCATCTAATATATTCGCATTTTTTT 318893 Query 77250 TAACAATAT-CCATGACAGTGGTAGAAATAATTGGAGATCGTATTCCATTTTTAGGATTA 77308 ||||| | ||| | | | ||||| ||||||| || | ||||||||||||| | Sbjct 318892 GGACAATTTCCCAAGTC-TCCTTTGAAATCATTGGAGCAGGTTTACCATTTTTAGGATCA 318834 Query 77309 ACATAGTTAAATAAGTCTTCCATTACGTCGCTAAATAGtttttttGTTTCCTTGTGTAGA 77368 | ||| || ||| | | | || || ||| || |||||| ||| |||| Sbjct 318833 ATATAAGTATATAGTTGATTAACAACTTCAGAGAATTTCTTAGTTGTTTGCTTTTGTAAG 318774 Query 77369 TTCGATACGGCTATTCTAGCAGCTAGAATTGCATAGTCAGGATGTTGTGTAGTGCAGGT- 77427 || || | || | ||||||||| | | ||||| || ||||| || || || | Sbjct 318773 TTTGAAATTGCAACTCTAGCAGCCAATACCGCATAATCTGGATGGATAGTTGT-CATATA 318715 Query 77428 GGCTGCTATTTCTGCCGCTAAAGTATCTAATTCTATAGTAGTAACTCCGTTATA 77481 || || |||| || |||||| |||||||||| | ||| ||||| || | ||| Sbjct 318714 AGCAGCAGTTTCAGCAGCTAAATTATCTAATTCGACAGTTGTAACACCATCATA 318661 >seq7 Length=736534 Score = 300 bits (332), Expect = 2e-76 Identities = 603/887 (68%), Gaps = 18/887 (2%) Strand=Plus/Minus Query 46339 TTTTGGTATTCACCTACACGTTTCTCGAAAAAATTAGTTTTGCCTTCCAATGATATATTT 46398 |||||||| || || | || |||||||| || ||||| || | | || || || Sbjct 707659 TTTTGGTAGTCGGAGACTCTCTTTTCGAAAAAGTTTGTTTTACCAGCAAGGGAAATGTTC 707600 Query 46399 TCCATAAAATCAAACGGATTAGTAACATTATAAAtttttttAAATCCTAATTCTGAAATC 46458 |||||||| || || ||||| ||||| | || | |||| | | |||||| | |||| Sbjct 707599 TCCATAAAGTCGAATGGATTTGTAACGTCGTATACCTTTTCACAACCTAATGC---AATC 707543 Query 46459 AGT---CTATCTGCAACGAATTCTATATACGTTTTCATCATTTCACAATTCATTCCTATG 46515 ||| ||||||||||| || || | |||| ||||| || |||||| || | Sbjct 707542 AGTAGTCTATCTGCAACAAACTCGACATACTGACACATCAAATCCTTATTCATACCGAGC 707483 Query 46516 AGTTTGACCGGTAGAGCCTCCGT-AAGAAACTCTTGTTCAATAGTGACAGCATCCGATAT 46574 | ||||| ||||| || || || ||| | |||| ||||||| || || || | || Sbjct 707482 AAGTTGACAGGTAGGGCGTCAGTGAAGTATTTCTT-TTCAATATCAACGGCTTCGGTAAT 707424 Query 46575 TATCGATGTTACTGTTTCCTCACTTGGTGGATGCATCAAATGTTTAAACATTAAACATGC 46634 || | | || ||| || ||| | ||| |||||||| ||| | ||||| || Sbjct 707423 GATTTGTCTGACAATTTTTTCGTCTGGGGTATGGTTCAAATGTGAAAAGAGCAAACAAGC 707364 Query 46635 AAAATCACAATGAAGGCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGG 46694 |||||| ||| | ||||||||||||| ||| | ||||| || || || | || || Sbjct 707363 AAAATCGGTATGTAAACCTTCATCTCTACAAATCAGCTCGTTGGAGAACGTCAAACCTGG 707304 Query 46695 CATTAGTCCACGCTTTTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCC 46754 ||| | || | |||||| | ||| || || | || || || ||||| ||||| || || Sbjct 707303 CATCAAACCTCTCTTTTTCAACCAGAAGATGGATGCAAATGAACCAGAGAAGAAAATACC 707244 Query 46755 TTCTACAGCCGCGAATGCGACAAGTCTCTCTCCGTAACTGGCATCATTAT---GAATCCA 46811 ||| ||||| || ||||| || | |||||| | | ||||| |||| |||||| Sbjct 707243 TTCAACAGCAGCAAATGCCACCAACCTCTCTGCAAACAATGCATCTTTATCTGCAATCCA 707184 Query 46812 CCTTTGAGCCCAATCAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAG 46871 || ||||| || ||||||| || | ||| || |||||||| || ||||| || | Sbjct 707183 TTTTAAGGCCCATTCGGCCTTTTCTTTGATACATGGGATTGTTTCAATTGCATTGAATAA 707124 Query 46872 AAAGtttttttCATCACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGA 46931 || | |||| | |||||| | || ||||| || || | | ||| |||| || Sbjct 707123 GAATTCACTTTCCTTTGGATCTTTGATGTAAGTATCAATCAATAAAGAATAAGTTTCCGA 707064 Query 46932 ATGAATGTTTTCAATAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTAC 46991 |||||||||||| || || || || || || |||||| | || || | ||| || || Sbjct 707063 ATGAATGTTTTCCATCATAATTTGGAACCCATAGAAACATTTAGCCTCTGGAATTTGAAC 707004 Query 46992 --CTCTGTACAAAATCGTTCAGACAAATTCTCATTCACTATTCCATCACTAGCAGCAAAA 47049 | || | ||| || ||| ||||| ||||| ||||| |||||| ||||||||| Sbjct 707003 ATCACTTGAGAAATTC--TCAACTAAATTTTCATTGACTATACCATCAGAAGCAGCAAAG 706946 Query 47050 AATGCCAATACATGTTTAATAAAATATTTTTCATCGGTAGTCAGT---TTATTCCAGTCA 47106 || || | || | ||| || || |||||| ||| | || ||||| ||| Sbjct 706945 AACGCTAGAACTCTTGAAATGAAGAATCTTTCATTTTCGTTCAATCTATTGTTCCAATCA 706886 Query 47107 TTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAGAATGACGCCTCTGCTTTTTTA 47166 | | |||||| || | ||| | ||| || || |||||||| || || ||||| || || Sbjct 706885 TGCAAATCTTTGGAGAGATCAATTTCCTCCGCAGTCCAGAAAGATGCTTCTGCCTTCTTG 706826 Query 47167 TACATATTCCATATATCACGATATTGGATCGGAAAAATAACAAATCT 47213 ||||| | ||| || || |||| | ||| ||||| | |||||| || Sbjct 706825 TACATTTGCCAAATTTCGTGATACTTGATTGGAAAGAGAACAAACCT 706779 >seq3 Length=1364687 Score = 100 bits (110), Expect = 4e-16 Identities = 145/202 (72%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 76606 CATAAAGAGATCAGGTATCCATAGAGCAATAAATAGATCTCGGGTTCTACGTTCTTCATT 76665 |||||| | ||| || ||||||||||||||||||| ||||| | ||| |||||| || Sbjct 699411 CATAAACATATCTGGAATCCATAGAGCAATAAATAAATCTCTAGCTCTCATTTCTTCCTT 699352 Query 76666 TCCTGTATTCTTTTTAAGATCTAGGAACTCCATAATATCAGAATGCCATGGTTCTAGATA 76725 || |||||| | | || || || || | || |||| ||||||||| |||| ||| Sbjct 699351 CCCATGATTCTTCCTGATATTGAGAAAGTCAAAAACATCACCATGCCATGGCTCTAAATA 699292 Query 76726 TATCGCCATA-ACACCCGGTCGTTTATTACCTCCCTGATCTATATATCTGGCAGTGTTAT 76784 ||| || | | |||| |||| ||| || || ||||| || | |||| ||||| || Sbjct 699291 TAT-GCAAAATGCACCTGGTCTTTTGTTTCCACCCTGGTCAACATATTGTGCAGTTGAAT 699233 Query 76785 TATAAACTCTCAACATTGGAAT 76806 | | ||| | ||||| || || Sbjct 699232 TGAATACTTTTAACATAGGGAT 699211 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712934301971520