Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq6 134 3e-26 seq5 118 2e-21 seq4 102 2e-16 >seq6 Length=742668 Score = 134 bits (148), Expect = 3e-26 Identities = 157/211 (74%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| ||||| ||||| || |||||||||||||| |||| ||||||||| |||||||||| Sbjct 86758 CAAG-TGAAGGGTAGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTA 86700 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || |||||||| || || ||||| | | || |||||||| ||||| | Sbjct 86699 ATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGA 86640 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | ||||| |||||| | || | | |||| ||| || ||||| | ||||| || || | Sbjct 86639 TCTTTTGCTTGACATTGTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTAC 86580 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTTT 152107 | || | ||||| || || | ||||| || Sbjct 86579 CGGTTAAGGTCTTGACAAAAATTTGCATCTT 86549 >seq5 Length=1193180 Score = 118 bits (130), Expect = 2e-21 Identities = 158/220 (72%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | ||||||||||| || ||||| |||||||| || | |||||||| || Sbjct 1151951 TCTCAAGACTAAGTGAAGAGTAGATTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACC 1151892 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| || || || |||||||| || || ||||| | | || |||||||| Sbjct 1151891 ATCTTCTAATTGCTTACCTGCAAAGATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTT 1151832 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| ||||| |||||| | || | |||| || ||| ||||| | ||||| Sbjct 1151831 GTCTTGGATTTTAGACTTGACATTGTCGATAGTGTCAGATGACTCGACTTCTAAGGTAAT 1151772 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCATTTTA 152108 ||| || || || | ||| || || || | ||||| ||| Sbjct 1151771 AGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCATCTTA 1151732 >seq4 Length=1293945 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || || || || |||| Sbjct 737903 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 737961 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| ||||||||||| | | || || ||||| || || | Sbjct 737962 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 738021 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || | || || ||||||| Sbjct 738022 TCTTCGACTTGACATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGATTGTTTTGC 738081 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || |||| |||||| Sbjct 738082 CTGTTAGTGTCTTGACAAAGATCTGCAT 738109 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || || || || |||| Sbjct 738358 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 738416 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| ||||||||||| | | || || ||||| || || | Sbjct 738417 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 738476 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || | || || ||||||| Sbjct 738477 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 738536 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || |||| |||||| Sbjct 738537 CTGTTAGTGTCTTGACAAAGATCTGCAT 738564 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || || || || |||| Sbjct 738586 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 738644 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| ||||||||||| | | || || ||||| || || | Sbjct 738645 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 738704 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || | || || ||||||| Sbjct 738705 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 738764 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || |||| |||||| Sbjct 738765 CTGTTAGTGTCTTGACAAAGATCTGCAT 738792 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || || || || |||| Sbjct 738814 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 738872 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| ||||||||||| | | || || ||||| || || | Sbjct 738873 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 738932 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || | || || ||||||| Sbjct 738933 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 738992 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || |||| |||||| Sbjct 738993 CTGTTAGTGTCTTGACAAAGATCTGCAT 739020 Score = 102 bits (112), Expect = 2e-16 Identities = 148/208 (71%), Gaps = 1/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || || || || |||| Sbjct 739042 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 739100 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| ||||||||||| | | || || ||||| || || | Sbjct 739101 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 739160 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || | || || ||||||| Sbjct 739161 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 739220 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || |||| |||||| Sbjct 739221 CTGTTAGTGTCTTGACAAAGATCTGCAT 739248 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/208 (71%), Gaps = 2/208 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || || || || |||| Sbjct 738131 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 738189 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| ||||||||||| | | || || ||||| || || | Sbjct 738190 GTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 738249 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || | || || ||||||| Sbjct 738250 TCTTCGACTTGACA-TTTCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 738308 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| || |||| |||||| Sbjct 738309 CTGTTAGTGTCTTGACAAAGATCTGCAT 738336 Score = 96.9 bits (106), Expect = 8e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || || || ||||| || ||||||||||| || | | || || || || |||| Sbjct 739470 CAAG-TGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTA 739528 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 | ||| || ||||| ||||| || |||||||| | | || || ||||| || || | Sbjct 739529 GTTGTTTACCAGCGAAAATAAGTCT-TGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGA 739587 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | |||| || ||| || || | || || ||||||| Sbjct 739588 TCTTCGACTTGACATTATCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGC 739647 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCATTT 152106 | || || ||||| || |||| |||||||| Sbjct 739648 CTGTTAGTGTCTTGACAAAGATCTGCATTT 739677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153820637383381