Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05]
11 sequences; 10,910,993 total letters
Query= NC_032001.1
Length=327147
Score E
Sequences producing significant alignments: (Bits) Value
seq5 145 2e-29
seq6 140 7e-28
seq4 114 3e-20
>seq5
Length=1193180
Score = 145 bits (160), Expect = 2e-29
Identities = 149/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||| ||||||||||||| | || | ||||| |||| ||| || || |||||
Sbjct 1151927 TTCCTTTTGAATGTTGTAGTCAGACAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 1151868
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| |||||||||||||| || | || || |
Sbjct 1151867 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTAGACTTGACATT 1151808
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||||||||| || | |||||||| | || || |||||||| || ||||| |||||
Sbjct 1151807 GTCGATAGTGTCAGATGACTCGACTTCTAAGGTAATAGTCTTACCAGTTAAAGTTTTAAC 1151748
Query 283088 GAATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 1151747 AAAAATTTGCATCTT 1151733
Score = 96.9 bits (106), Expect = 7e-15
Identities = 125/173 (72%), Gaps = 0/173 (0%)
Strand=Plus/Plus
Query 317029 GGGAACCCTTCCAACTGACCGTTCACAATCGCCCTCATCAGTGTCGACTTGCCAGCACCA 317088
||||| ||||| | |||||||| |||| || ||||| | || ||||| |||||||||
Sbjct 992501 GGGAAACCTTCAACTTGACCGTTAGCAATAGCTCTCATTAAGGTGGACTTACCAGCACCA 992560
Query 317089 TTGGGGCCGCAAAGACCATACCGATTTCCCTTCTTCAGATTAAAACGGGTGTTGTTCAGA 317148
|| || || || | |||||| | | || |||| || | || | || ||||| |
Sbjct 992561 TTTGGACCACATAAACCATATCTTCTACCTCTCTTTAGTCTTAATTGAGTCTTGTTTAAC 992620
Query 317149 AGAATCTTACCACCATATGCCAGAGAGAACTCACAATCACACAGGTCCTCGCC 317201
| ||||||| ||||||| || || ||||| ||||| | ||| | ||| || ||
Sbjct 992621 AAAATCTTAGCACCATAAGCAAGGGAGAATTCACAGTTACATAAGTCTTCACC 992673
>seq6
Length=742668
Score = 140 bits (154), Expect = 7e-28
Identities = 148/195 (76%), Gaps = 0/195 (0%)
Strand=Plus/Minus
Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967
||| ||||||||||||||||| | | || | ||||| |||| ||| || || |||||
Sbjct 86743 TTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCTAATTGCTTACCTGCAAA 86684
Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027
||| | | |||||||||| |||||||| ||||| |||||||||||| || || |
Sbjct 86683 GATAAGTCTTTGTTGGTCAGGTGGAATACCTTCCTTATCTTGGATCTTTTGCTTGACATT 86624
Query 283028 ATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087
||||| ||||| |||| ||| ||||| | || || |||||||| || || ||||| ||
Sbjct 86623 GTCGATGGTGTCAGAAGATTCAACTTCTAAGGTAATGGTCTTACCGGTTAAGGTCTTGAC 86564
Query 283088 GAATATCTGCATTTT 283102
|| || ||||| ||
Sbjct 86563 AAAAATTTGCATCTT 86549
>seq4
Length=1293945
Score = 114 bits (126), Expect = 3e-20
Identities = 142/193 (74%), Gaps = 1/193 (1%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 739486 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 739545
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | ||| ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 739546 ATAAGTC-TTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 739604
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 739605 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 739664
Query 283089 AATATCTGCATTT 283101
|| ||||||||||
Sbjct 739665 AAGATCTGCATTT 739677
Score = 111 bits (122), Expect = 3e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 738374 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 738433
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 738434 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 738493
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 738494 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 738553
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 738554 AAGATCTGCAT 738564
Score = 111 bits (122), Expect = 3e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 738602 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 738661
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 738662 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 738721
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 738722 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 738781
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 738782 AAGATCTGCAT 738792
Score = 111 bits (122), Expect = 3e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 738830 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 738889
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 738890 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 738949
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 738950 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 739009
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 739010 AAGATCTGCAT 739020
Score = 111 bits (122), Expect = 3e-19
Identities = 139/191 (73%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 739058 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 739117
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || ||
Sbjct 739118 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTA 739177
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 739178 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 739237
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 739238 AAGATCTGCAT 739248
Score = 105 bits (116), Expect = 1e-17
Identities = 138/191 (72%), Gaps = 0/191 (0%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 737919 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 737978
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || |
Sbjct 737979 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGACATTG 738038
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 738039 TCAATGGTGTCGGACGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 738098
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 738099 AAGATCTGCAT 738109
Score = 102 bits (112), Expect = 2e-16
Identities = 138/191 (72%), Gaps = 1/191 (1%)
Strand=Plus/Plus
Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968
|| || |||||||||||||| | || || | || |||||||||||||| || || ||
Sbjct 738147 TCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCCTCTAGTTGTTTACCAGCGAAA 738206
Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028
|| | | || ||||| ||||||||||||||||| |||||||| | || || |
Sbjct 738207 ATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCCTGGATCTTCGACTTGAC-ATT 738265
Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088
|| || ||||| || | || || || | ||||| || || || || | ||||| ||
Sbjct 738266 TCAATGGTGTCGGATGACTCCACCTCCAATGTGATTGTTTTGCCTGTTAGTGTCTTGACA 738325
Query 283089 AATATCTGCAT 283099
|| ||||||||
Sbjct 738326 AAGATCTGCAT 738336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1046739052475194
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |