Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20kudriavzevii_20[genbank_20GCA_5F002166775.1_202017-06-05] 11 sequences; 10,910,993 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4 107 2e-18 >seq4 Length=1293945 Score = 107 bits (118), Expect = 2e-18 Identities = 153/213 (72%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || ||||| ||||||||| ||||| ||||| ||||| || | |||| Sbjct 737898 AAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCC 737957 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| || || | ||| ||||| | |||| | |||||||||| Sbjct 737958 TCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 738017 Query 41771 ATGATTTTTTGCTTCAACGACGACACAG-TGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| || ||| | | | || | ||||| |||||||||||||| || || || Sbjct 738018 TGGATCTTCGACTTGA-CATTGTCAATGGTGTCGGACGACTCCACCTCCAATGTGATTGT 738076 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || || ||||| || || |||||||| Sbjct 738077 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738109 Score = 102 bits (112), Expect = 8e-17 Identities = 152/215 (71%), Gaps = 7/215 (3%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || ||||| ||||||||| ||||| ||||| ||||| || | |||| Sbjct 738126 AAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCC 738185 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| || || | ||| ||||| | |||| | |||||||||| Sbjct 738186 TCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 738245 Query 41771 ATGATTTTTTGCTTCAACGACGACACA---GTGTCGCTCGACTCCACCTCCACCGTTATC 41827 ||| || ||| ||| || |||||| ||||||||||||| || || Sbjct 738246 TGGATCTTCGACTT----GACATTTCAATGGTGTCGGATGACTCCACCTCCAATGTGATT 738301 Query 41828 GTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| || || || ||||| || || |||||||| Sbjct 738302 GTTTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738336 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || ||||| ||||||||| ||||| ||||| ||||| || | |||| Sbjct 738353 AAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCC 738412 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| || || | ||| ||||| | |||| | |||||||||| Sbjct 738413 TCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 738472 Query 41771 ATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| || ||| | | | | | |||||| ||||||||||||| || || || Sbjct 738473 TGGATCTTCGACTTGACATTATCA-ATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 738531 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || || ||||| || || |||||||| Sbjct 738532 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738564 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || ||||| ||||||||| ||||| ||||| ||||| || | |||| Sbjct 738581 AAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCC 738640 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| || || | ||| ||||| | |||| | |||||||||| Sbjct 738641 TCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 738700 Query 41771 ATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| || ||| | | | | | |||||| ||||||||||||| || || || Sbjct 738701 TGGATCTTCGACTTGACATTATCA-ATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 738759 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || || ||||| || || |||||||| Sbjct 738760 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 738792 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || ||||| ||||||||| ||||| ||||| ||||| || | |||| Sbjct 738809 AAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCC 738868 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| || || | ||| ||||| | |||| | |||||||||| Sbjct 738869 TCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 738928 Query 41771 ATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| || ||| | | | | | |||||| ||||||||||||| || || || Sbjct 738929 TGGATCTTCGACTTGACATTATCA-ATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 738987 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || || ||||| || || |||||||| Sbjct 738988 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739020 Score = 102 bits (112), Expect = 8e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || ||||| ||||||||| ||||| ||||| ||||| || | |||| Sbjct 739037 AAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCC 739096 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| || || | ||| ||||| | |||| | |||||||||| Sbjct 739097 TCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCCTCCTTGTCC 739156 Query 41771 ATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| || ||| | | | | | |||||| ||||||||||||| || || || Sbjct 739157 TGGATCTTCGACTTGACATTATCA-ATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 739215 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || || ||||| || || |||||||| Sbjct 739216 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739248 Score = 95.1 bits (104), Expect = 1e-14 Identities = 151/213 (71%), Gaps = 3/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 || |||| || ||||| ||||||||| ||||| ||||| ||||| || | |||| Sbjct 739465 AAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGTGTCCTACCGTCC 739524 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || || || || ||||| || || | || ||||| | |||| | |||||||||| Sbjct 739525 TCTAGTTGTTTACCAGCGAAAATAAGTCT-TGCTGGTCTGGTGGAATACCCTCCTTGTCC 739583 Query 41771 ATGATTTTTTGCTTCA-ACGACGACACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| || ||| | | | | | |||||| ||||||||||||| || || || Sbjct 739584 TGGATCTTCGACTTGACATTATCA-ATGGTGTCGGATGACTCCACCTCCAATGTGATTGT 739642 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| || || || ||||| || || |||||||| Sbjct 739643 TTTGCCTGTTAGTGTCTTGACAAAGATCTGCAT 739675 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462303936433200