Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq183 185 9e-42
>seq183
Length=27355
Score = 185 bits (204), Expect = 9e-42
Identities = 563/860 (65%), Gaps = 15/860 (2%)
Strand=Plus/Minus
Query 16688 ACGCGTTTTTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA 16747
|| || || ||||| ||||| |||||||| | || || || |||||||||||||| ||
Sbjct 26787 ACCCGCTTCTCGAAGAAGTTGGTTTTGCCGGCAAGCGAAATGTTCTCCATGAAATCGAAT 26728
Query 16748 GGATTAGTAGC--TGAAAATATTTTAGAGTACCCCAGTTCGGCGATTAATCTATCCGCTA 16805
|| || || | || | || | | | || || || | | || | || || |
Sbjct 26727 GGGTTGGTGACGTTGTAGTGCTTGTCGC--AGCCGAGGGCGACAAACAAGCGGTCGGCGA 26670
Query 16806 CAAATTCTATATATTGGCACATTAATTCGCAGTTCATTCCTAT-AAGACGTACCGGAAGA 16864
|||| || | || |||||||| || || |||||| || | ||| | || || |
Sbjct 26669 CAAACTCGACGTACTGGCACATCAAGTCCTTGTTCATGCCCAACAAGTTG-ACGGGCAAG 26611
Query 16865 GCTTCCGTCAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCA---ACT 16921
|| || || || | || | ||| ||| |||| || || | || || || || | |
Sbjct 26610 GCGTCAGTGAAGTAGCGCTTCTCGATATCAACGGCCTCGGTGATGAT-CTTGCGGACAAT 26552
Query 16922 CGTTCCTCGGACGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGT 16981
||| |||| ||| || | || || || |||| || || || || ||| ||
Sbjct 26551 CGT--CTCGTCCGGGGTGTTATTCAGGTGCGAGAACAACAAGCAGGCAAAGTCGGTGTGC 26494
Query 16982 AATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGT 17041
|| |||||||| | | ||| | ||||| || || ||||| |||||||| || ||
Sbjct 26493 AAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTCAAGCCGGGCATGAGCCCCCGC 26434
Query 17042 TTCTTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCA 17101
||||| ||||| || |||| || ||||| || || ||||| || ||||| |||| |||
Sbjct 26433 TTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAGAAAATCCCCTCCACGGCGGCA 26374
Query 17102 AACGCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCAC 17161
||||| | || || ||| | || ||| || |||| |||||| | || |||||
Sbjct 26373 AACGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCGTTGATCCATCTGAGCGCCCAC 26314
Query 17162 TCGGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCC 17221
||||| || | ||| ||||| || | || || || || || | | ||| || |||
Sbjct 26313 TCGGCCTTCTCCTTGATGCACGGGATGTTATCGATCGCGTTGAAGAGGTACTCGTTCTCC 26254
Query 17222 TGTAGGTCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCC 17281
| | || | | ||||| ||||| | | |||| | || ||||| |||||||||
Sbjct 26253 TTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTACGTCTCCGAGTGGATGTTCTCC 26194
Query 17282 ATGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAAT 17341
|| ||||| || ||||| || || || |||| | || || || || ||||
Sbjct 26193 ATCATGATCTGGAAACCGTAGAAACACTTTGCCTCCGGCACCTGCACCTCTGCGGAGAAG 26134
Query 17342 CGTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGC 17401
||| | | || |||||||| || ||||| ||||| || |||||||| | |
Sbjct 26133 TTCTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGCGGCAAAGAACGCCAACACTCTC 26074
Query 17402 TTAATGAAATATTTTTCG-TCCGGTGTAAGAACGCG--CCAGTCCTTTAAATCTTTGGAT 17458
||||| ||| | ||| | || || | || |||||| | | || || ||
Sbjct 26073 GAGATGAAGTATCTCTCGTTGTCGTTCAACCTCTCGTTCCAGTCGTGCAGGTCCTTTGAG 26014
Query 17459 ATATCCACTTCTTCGGGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAATA 17518
| ||| | || |||| |||||||||| ||| ||||||| || ||||| | ||| ||
Sbjct 26013 AGATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGCCTTCTTGTACATCTGCCATATC 25954
Query 17519 TCATTGTATTGTATGGGGAA 17538
|| | ||| | || |||||
Sbjct 25953 TCGTGGTACTTGATCGGGAA 25934
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517542223014960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |