Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_001611.1
Length=185578
Score E
Sequences producing significant alignments: (Bits) Value
seq95 210 3e-49
seq183 158 1e-33
seq30 116 4e-21
>seq95
Length=34527
Score = 210 bits (232), Expect = 3e-49
Identities = 1176/1869 (63%), Gaps = 45/1869 (2%)
Strand=Plus/Minus
Query 52807 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 52866
||| ||||| |||| || | |||| || || | || |||||||| || || || |
Sbjct 2594 TGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGTCTTCAA 2535
Query 52867 ACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGA-ATAACTCGGATCTGCTA 52925
|| |||| ||||| || ||||| || | ||| || | || ||| | |
Sbjct 2534 CCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTTCTTCAA 2475
Query 52926 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 52985
||||| ||||| || ||| || |||||| | || || ||||| || ||||| | |
Sbjct 2474 G-TGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCGCCATGTCGA 2416
Query 52986 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 53044
|||||| ||| ||||| || ||||| | || ||||| || || ||| || || | |||
Sbjct 2415 TGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTC-CTTGATTTCCTGTGGG 2357
Query 53045 AGGTTTGTA---TTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATCTCATCA 53101
| ||||| | ||||| || || || || || || ||||| || ||
Sbjct 2356 ATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCATAGAGTCG 2297
Query 53102 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 53161
||||||| | |||| || |||| | | | || || || | || || ||
Sbjct 2296 TTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCTGGAACTCA 2237
Query 53162 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 53221
|| | ||| ||||| | || ||| || || ||| || || || | | | || || |
Sbjct 2236 CCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTAA 2177
Query 53222 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 53281
|| | ||| || | || || ||||| ||||| || || ||||| ||| ||||| |
Sbjct 2176 CCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGTTTCTCAAC 2117
Query 53282 CCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAA 53339
|||| | |||||| || || || || | ||||| | ||| | || | || | |
Sbjct 2116 CCGTGGGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTAGGCTTCTTA 2057
Query 53340 CNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTA 53395
| || || | ||| | | |||| | | ||| |||| ||
Sbjct 2056 CCCCAGAGGTCGAAC--TGGAGCACACCTTGCGATGCTGGTGAGC---CCT-CATAGGTC 2003
Query 53396 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 53455
||||| || || ||||| || | || ||| || | |||| | | || ||
Sbjct 2002 TCGTAGGGACCCTCCTTGATTGCCAACTCGACGGACGCTTCAAGTGCAGCATGGTAGATT 1943
Query 53456 GTTTCGAAGATCTTCTTATTTAGATCTTGTGCTTCCAGGCTATCAAATGGATAATTTAAG 53515
|||||||| || | | || | || | ||| || | || || || | | |
Sbjct 1942 GTTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGCAGTCTGAGG 1883
Query 53516 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 53575
|| || || ||||| || || ||||| ||||||| | | || ||||| | |||| | |||
Sbjct 1882 AGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTTCTCATGTTA 1823
Query 53576 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGGTTTCTG 53635
|| | || || |||| |||||| ||||| | ||| || ||||| || | ||| ||
Sbjct 1822 GATCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGTTCAAGTTCTTG 1763
Query 53636 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAAT-----CA--AATTGTC--CATCT 53686
||| || ||| | | || | || ||| ||| | || || ||| | ||
Sbjct 1762 GCAACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGAAGTGTGATCGTCA 1703
Query 53687 ATT---ACAAA--CATGTTCAATGCAATAGATGCCAGATTACAAACGGCTACCTCATTAG 53741
| ||||| || | ||| |||| || |||| ||||| || || || ||||
Sbjct 1702 CTCTCGACAAAGGCAGG--CAACGCAACCGAAGCCAAGTTACAGACAGCGACTTCAT--- 1648
Query 53742 CATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 53798
| | || | |||| | |||||| || | || | | ||||| | || || |
Sbjct 1647 CGTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCCAAGT 1588
Query 53799 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGCGTACCAGTTT 53858
| ||||| || ||| ||||||| || ||||| || || ||||| || ||||| ||||
Sbjct 1587 TCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCCGTTT 1528
Query 53859 CAATCTGGGATTCTATAATCGCTTTCCAGACGACACGAGCCTTTATTATAGATTTGTATC 53918
|| | |||| ||| | |||| | ||| | | ||||| || | ||| || |
Sbjct 1527 CAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGTC--TTTCTACC 1470
Query 53919 TCT--TTTCTCTTTCGTATAGTGTATACAATCGTTCAAACTCGTCTCCCCAAACATTGTC 53976
||| |||||||||||||| |||||| | ||| |||||||| || | || | |
Sbjct 1469 TCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGGA 1410
Query 53977 CAATCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTT 54036
||| || || ||| || | | | | ||| || | | || |||| ||
Sbjct 1409 CAAGCCTGGGACCTCACTTGGGGAGAAAAGAGTCCATTCCTGATTCTGCTCAACTCTCTT 1350
Query 54037 CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTT 54096
||| || | ||||| ||||| | || || | ||||||| ||| ||| || ||
Sbjct 1349 CATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTGATTTCTTCCTT 1290
Query 54097 TCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTA 54156
|| |||||| | | |||| ||| | | ||||| || ||||| || || | ||
Sbjct 1289 ACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGATA 1230
Query 54157 TATGGTCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATT 54216
| | | | || || | |||||| || || || || | ||||| || ||||| ||
Sbjct 1229 GAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGTT 1170
Query 54217 ATAAACTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCT 54276
|||| | || ||||||||| ||||| ||||| | ||| ||||| || | || |||
Sbjct 1169 GAAAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGGA 1110
Query 54277 TCCACTGGCACGAATATTACTAATTGATAGACCTATCCCCCCTGCCATTTTAGAGATTAA 54336
|| |||| | || || || | ||| || || ||||| | || ||||| |
Sbjct 1109 GCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCAG 1050
Query 54337 TGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAG 54396
|| || |||| || || || ||||| ||||| || |||||| ||| | |
Sbjct 1049 CGCACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCAA 990
Query 54397 AAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTG 54456
|||||| ||||| |||| | || || || || || |||||||||||||||||
Sbjct 989 GAAACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGTG 930
Query 54457 CGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCGATAGCTGAGTCTATATCCCATTG 54516
|| || || | | ||| | | ||||| |||||||| || || || ||
Sbjct 929 AGTGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGCC 870
Query 54517 ATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGTT 54576
||||| || || ||||| | ||| | || |||||| |||||||| | |||||| |
Sbjct 869 GTGAATACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCATC 810
Query 54577 TATTTTCAGCAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTC 54636
| | ||| | ||||||| | || | || || || || || || ||||| |||||
Sbjct 809 CAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAATTGTAGTTGAAGTC 750
Query 54637 TCGTTCGTA 54645
|| |||||
Sbjct 749 ACGGTCGTA 741
>seq183
Length=27355
Score = 158 bits (174), Expect = 1e-33
Identities = 400/600 (67%), Gaps = 14/600 (2%)
Strand=Plus/Minus
Query 24126 AACATCAAACATGCGAAATCGCAGTGTAGACCCTCGTCTCTACTAATTAATTCGTTGGAA 24185
|||| ||| || || || ||| ||| | |||||||| | || || || ||||| ||
Sbjct 26520 AACAACAAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAG 26461
Query 24186 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGATCCA 24245
||||| | |||||||| || || ||||| || | ||| || || |||||||| || ||
Sbjct 26460 AACGTCAAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCC 26401
Query 24246 GAAAAGAAAATTCCTTCTACTGCCGCAAAGGCAATAAGTCTTTCTCCATA--AC-CGGCG 24302
|| |||||||| || || || || ||||| || | | | || ||| | || | |
Sbjct 26400 GAGAAGAAAATCCCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCC 26341
Query 24303 CTGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATTGTCTCT 24362
|||| | ||||| | | ||||| |||||||||| || | || || || | ||
Sbjct 26340 TTGTCGTTGATCCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCG 26281
Query 24363 ATAGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCAATCAAAAGA 24422
|| || || ||||| || | || || || ||| || || || || || ||||| | |
Sbjct 26280 ATCGCGTTGAAGAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACA-A 26222
Query 24423 CTA-TACATTTCCGAATGAATGTTTTCAATGGCCATTTGAAATCCGTAGAAACATCTAGC 24481
| | ||| | ||||| || ||||| || || || || || ||||||||||| | ||
Sbjct 26221 CGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAACACTTTGC 26162
Query 24482 CTCGGTAATCTGTACTTCTATACAAAATCGTTCT--GCTAAATTTTCATTCACTATTCCG 24539
||| | | ||| || ||| | || ||||| | || || || ||||| || |||
Sbjct 26161 CTCCGGCACCTGCACCTCTGCGGAGAA--GTTCTCCACCAAGTTCTCGTTCACAATCCCG 26104
Query 24540 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCTGGTGTT--- 24596
|| || ||||| |||||||| || || || ||| | |||| || |||
Sbjct 26103 TCCGAAGCGGCAAAGAACGCCAACACTCTCGAGATGAAGTATCTCTCGT-TGTCGTTCAA 26045
Query 24597 -AGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCTTCCACTGTCCAAAATGA 24655
| ||||| || | | || || || | ||| | || || | |||||||| ||
Sbjct 26044 CCTCTCGTTCCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAAAAAGA 25985
Query 24656 TGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGAATTGGAAAAATAACAAA 24715
||||||||||| || ||||| | ||| || || || || | || || |||| |||||
Sbjct 25984 GGCCTCTGCCTTCTTGTACATCTGCCATATCTCGTGGTACTTGATCGGGAAAAGCACAAA 25925
>seq30
Length=26055
Score = 116 bits (128), Expect = 4e-21
Identities = 308/463 (67%), Gaps = 17/463 (4%)
Strand=Plus/Plus
Query 52801 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 52860
|||||| |||| ||||| | | | || | ||| || |||| ||||||||| || ||
Sbjct 1851 GTCCAAACTGAACTGAATTGCTGAAGCAGCAGCTTTGGTTCGTAAATAGTACATACCTGT 1910
Query 52861 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTTGTTAGTTTGGAATAACTCGGAT- 52919
||| || || |||| ||||||||||||| || || | ||| ||| | | ||
Sbjct 1911 TTTGAGTCCCTTCTTCCACGCGTAAAAATGCATGCTGGTCAATTTAGAAAAGGTGACATC 1970
Query 52920 CTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 52979
|||| | | | ||||||| ||| |||||| | || | | |||||||| ||||
Sbjct 1971 CTGCAAGA-ACAAATTCATACTTTGTGATTGATCAACAAATGGGGCTCTGTCTGCCGCCA 2029
Query 52980 TTTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 53038
| | ||| || ||| |||||| |||||||| | |||||||| ||| | || || ||
Sbjct 2030 TATCTATTATAGTCCTTTGTGATATTTCCCATACTGTTTTATACAACGC-TTTGATTTCA 2088
Query 53039 TCTGGAAGG---TTTGTATTCTGAATAGATCCACCATCTACCATAATCCTATTCTTGATC 53095
||||| | ||| |||| ||||| || || ||| | | ||||| |||| || ||
Sbjct 2089 GGTGGAATGGCTTTTATATTTTGAATGGACCCGTCATTTTCGATAATATTATTTTTCATA 2148
Query 53096 TCATCATTCCAT-----AATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 53150
||| | ||||| || ||| || | | | ||||| | | ||| ||||
Sbjct 2149 TCAATACTCCATAAGCCAAGTTTAACTAAATCATCA-ACTAAGTATTT----ATTGACTA 2203
Query 53151 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAG 53210
||||| |||||| || ||||||| || || ||||| ||| || || |
Sbjct 2204 CTTGATGTTCTCCTGATAATACTCGACGGACATATATATTGGATGTAATAGGCTCAAAGC 2263
Query 53211 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCAT 53253
| ||||| || | |||||| | |||||||||||| |||||
Sbjct 2264 ATTCATTGAAACCGAGAATTTGGGAAGTTGATGCAGTTGGCAT 2306
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 593717725966560
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