Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_001962.1
Length=128413
Score E
Sequences producing significant alignments: (Bits) Value
seq138 109 5e-19
seq97 109 5e-19
seq468 84.2 2e-11
>seq138
Length=17849
Score = 109 bits (120), Expect = 5e-19
Identities = 164/233 (70%), Gaps = 0/233 (0%)
Strand=Plus/Plus
Query 25029 GTAAAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAA 25088
|| || |||||||| || |||| || || || || || ||||||||| ||| |||
Sbjct 9495 GTCAAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAA 9554
Query 25089 CCCGCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTA 25148
| | || || | | || |||||||||| || ||||| |||||| | ||
Sbjct 9555 TCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCT 9614
Query 25149 GATCAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGAT 25208
|| || ||||||||||| ||||| || || ||||| |||||| | |||| || ||||
Sbjct 9615 GACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGAC 9674
Query 25209 TACAATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
||||| || ||||| ||||| || | ||| |||| || |||| |||| ||
Sbjct 9675 TACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 9727
>seq97
Length=66064
Score = 109 bits (120), Expect = 5e-19
Identities = 162/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 25032 AAAATGCAAATATTCATCAAAACATTGACGGGCAAAACCATTACCGCCGAAACGGAACCC 25091
|| |||||||| ||| ||||||| | || || || || |||||| || || |
Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302
Query 25092 GCAGAGACGGTGGCCGATCTCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGAT 25151
| || || | | | || ||||||||||||| || || |||||| | || ||
Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362
Query 25152 CAACAAAGACTTATCTTTGCGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTAC 25211
|| |||||| | ||||| || || || |||||||||||| | |||| | |||| |||
Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422
Query 25212 AATATTCAAAAGGAATCTACTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| || ||||||||||| ||| | ||| |||| ||| |||| |||| ||
Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472
>seq468
Length=160
Score = 84.2 bits (92), Expect = 2e-11
Identities = 109/151 (72%), Gaps = 0/151 (0%)
Strand=Plus/Plus
Query 25111 TCAAGCAAAAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTG 25170
|||||||||| || || || |||||| | || ||| || || |||||||| || |
Sbjct 8 TCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACCAGACCAGCAGAGACTTATTTTCG 67
Query 25171 CGGGCAAACAATTGGAAGATTCCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTA 25230
| || |||||| | ||||| | ||| || | || ||||| || ||||||||||| |
Sbjct 68 CTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGACTACAACATCCAAAAGGAATCGA 127
Query 25231 CTCTTCACATGGTGTTACGATTACGAGGAGG 25261
|| | ||| ||||||| |||| |||| ||
Sbjct 128 CTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 410794186562108
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |