Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq183 403 2e-107 seq97 91.5 2e-13 >seq183 Length=27355 Score = 403 bits (446), Expect = 2e-107 Identities = 600/849 (71%), Gaps = 9/849 (1%) Strand=Plus/Plus Query 116576 GAGCCGCTGCTGCGCGAGAACCCCCGCCGGTTCGTGATTTTCCCCATACAATACCCGGAC 116635 ||||||||| || |||||| | ||||| ||| ||||||| || | |||| || Sbjct 25895 GAGCCGCTGTTGGTTGAGAACAAGAGACGGTTTGTGCTTTTCCCGATCAAGTACCACGAG 25954 Query 116636 ATGTGGCGCATGTACAAAAAGGCCGAGGCGTCGTTCTGGACCGTCGAGGAGGTGGACCTG 116695 || |||| |||||||| ||||| ||||| || || ||||||| ||||||| | || || Sbjct 25955 ATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTGGACCGCCGAGGAGATCGATCTC 26014 Query 116696 TCCAAGGACACGAGCGACTGG---GAGCGCTTGAACGACAACGAGCGCCATTTCATCAAG 116752 || |||||| | ||||||| ||| | ||||||||||||||| | | |||||| | Sbjct 26015 TCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGAGAGATACTTCATCTCG 26074 Query 116753 CACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCGT 116812 ||| |||| || || ||||| ||||| || || |||||||| |||| ||| Sbjct 26075 AGAGTGTTGGCGTTCTTTGCCGCTTCGGACGGGATTGTGAACGAGAACTTGGTGGAGAAC 26134 Query 116813 TTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCATG 116872 ||| | |||||||||||| | ||||| ||| |||||||| || |||||| ||| Sbjct 26135 TTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGGTTTCCAGATCATGATG 26194 Query 116873 GAGAACGTGCACTCGGAAATGTATTCGACCCTCATCGACACGTACGTGCGCTCTTCGGAG 116932 |||||| | |||||||| | ||| ||| | ||||||||||||||| | || || Sbjct 26195 GAGAACATCCACTCGGAGACGTACTCGTTGTTGATCGACACGTACGTGAAGGATCCGAAG 26254 Query 116933 GAGAA---GCTCCGTTTGTTGAACGCCATCGAGACGATGCCGTGCGTCAAAGAGAAGGCC 116989 ||||| | || | || ||||| ||||| | || |||||| |||| ||||||||| Sbjct 26255 GAGAACGAGTACC---TCTTCAACGCGATCGATAACATCCCGTGCATCAAGGAGAAGGCC 26311 Query 116990 GAGTGGGCGCTGCGCTGGATCGCCGGCAGAGAGGCCGCCTTCGGCGAGCGCCTGGTGGCC 117049 ||||||||||| | |||||| || || || || || ||||||||| ||||||| Sbjct 26312 GAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGGCGAGCGCTTGGTGGCG 26371 Query 117050 TTCGCGGCCGTCGAGGGCGTCTTCTTTTCGGGCAGTTTCGCCGCCATATTTTGGCTCAAG 117109 || || ||||| ||||| | ||||| |||||| || || | || || ||| | ||| Sbjct 26372 TTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGGTTGAAG 26431 Query 117110 AAACGCGGCCTCATGCCCGGCCTGACTTTCAGCAACGAGCTCATCTCCAGGGACGAGGGT 117169 || || || |||||||||||| |||| ||| |||||| | |||| |||||||||| Sbjct 26432 AAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGATCTGTCGGGACGAGGGC 26491 Query 117170 CTGCATTGCGACTTTGCCTGTTTGCTGTTCAAGCATTTGGTGCAGCGACCGAGCGCGGCG 117229 |||| |||||||||||| ||| ||||| ||| || | ||| || | || Sbjct 26492 TTGCACACCGACTTTGCCTGCTTGTTGTTCTCGCACCTGAATAACACCCCGGACGAGACG 26551 Query 117230 CGCGTCAGGGAGATCGTCACCGACGCGGTCGCCATCGAGCAGCGCTTCCTCACCGAAGCG 117289 ||| | ||||| ||||||| || || | |||||| |||||| | |||| || || Sbjct 26552 ATTGTCCGCAAGATCATCACCGAGGCCGTTGATATCGAGAAGCGCTACTTCACTGACGCC 26611 Query 117290 CTGCCGGTGCGTCTGCTGGGACTCAATTGCGAAACGATGTCGCAATACATCGAGTTCGTC 117349 |||| || || |||| | || || ||||| || ||| ||||||| ||| Sbjct 26612 TTGCCCGTCAACTTGTTGGGCATGAACAAGGACTTGATGTGCCAGTACGTCGAGTTTGTC 26671 Query 117350 GCCGACAGGCTGCTGCTCGAGCTGGTCGGCGCCAAGCACTACAACACGCCCAACCCGCTG 117409 |||||| | || | ||| || | | ||| ||||||||||||| ||||||| | Sbjct 26672 GCCGACCGCTTGTTTGTCGCCCTCGGCTGCGACAAGCACTACAACGTCACCAACCCATTC 26731 Query 117410 GACTTTATG 117418 || || ||| Sbjct 26732 GATTTCATG 26740 >seq97 Length=66064 Score = 91.5 bits (100), Expect = 2e-13 Identities = 160/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || |||||||| ||||| ||||| || || || || || || ||| | || || || | Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 |||||| | | | ||||| ||||||| | ||||| || || || || | ||| Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 |||||| || | |||| ||| || || || |||| || | | || | ||||||| Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGGCGG 40919 |||||||| ||||| |||| |||| | || || | ||||| || || || Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGTGG 5475 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515215838194720