Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq468 102 9e-17 seq97 86.0 7e-12 >seq468 Length=160 Score = 102 bits (112), Expect = 9e-17 Identities = 113/151 (75%), Gaps = 0/151 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | ||||||||| ||||| || |||||||| || ||||| |||| | Sbjct 158 CCACCTCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGAC 99 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | || | |||| ||||| || ||||||||||| || |||| ||||||||| | || Sbjct 98 AAGGTTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGA 39 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGA 43107 | | ||||||||| ||| ||||| |||| Sbjct 38 ATACCTTCCTTGTCCTGGATCTTTTGCTTGA 8 >seq97 Length=66064 Score = 86.0 bits (94), Expect = 7e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 42957 CCTCCTCTTAAACGCAACACCAAATGCAATGTGCTCTCCTTTTGAATATTGTAATCAGCC 43016 || ||||| || | || ||||| ||||| ||| |||||||| || ||||| || | Sbjct 5472 CCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGAT 5413 Query 43017 AGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAATATGAGTCGCTGCTGGTCGGCCGGC 43076 | ||| | | || || | |||||||||||||| || | || |||||||| | || Sbjct 5412 AAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGA 5353 Query 43077 ACGCTCTCCTTGTCCATGATTTTTTGTTTGAGCGTCGCCACCGTGTCGCTCGATTCCACA 43136 | | |||||||| ||||||||| |||| | | | |||||| || || || Sbjct 5352 ATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAACC 5293 Query 43137 TCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTACAAAGATTTGCATTTT 43186 || | || || || || || || || || || || || |||||||| || Sbjct 5292 TCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 5243 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571813868890160