Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_003102.1
Length=139342
Score E
Sequences producing significant alignments: (Bits) Value
seq95 311 8e-80
seq183 275 6e-69
seq97 114 1e-20
seq138 98.7 9e-16
seq30 93.3 4e-14
>seq95
Length=34527
Score = 311 bits (344), Expect = 8e-80
Identities = 1209/1884 (64%), Gaps = 58/1884 (3%)
Strand=Plus/Minus
Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168
|| |||||||| || |||||| || || | || ||| | || || ||||| || |||
Sbjct 2599 TCAACTGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGTC 2540
Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCC-ATAACTCGG--- 22224
|||| ||| ||||||| |||| || || ||||| ||||| || || || | ||
Sbjct 2539 TTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTTC 2480
Query 22225 --CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282
||||| |||| || || |||||| ||| ||||| |||| |||| || ||
Sbjct 2479 TTCAAGTGGATGTTCA---TG---GACTGAGACTGGTCGATGTACGCACCTCTGTCAGCC 2426
Query 22283 GCCATATTTATCAATGTACGCATC----GACATTTCCCATACGGTCTTGTACAGTTGCCT 22338
||||| | | ||| ||| | | || ||||| |||||||| |||| | | |
Sbjct 2425 GCCATGT----CGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTCCTT 2370
Query 22339 GATCTCTAACGGTATCGATTCGATCCT-CTGGACGGACCCGTTATTGTGTATGATCAAAT 22397
||| || || || | || || | ||||| ||| ||||| | | ||||| |
Sbjct 2369 GATTTCCTGTGGGAT-GTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGT 2311
Query 22398 TTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCA 22457
| || || | |||||||| | || || | ||| ||| | | || | ||||||
Sbjct 2310 TCTTCATAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCA 2251
Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517
| | || ||||| |||| ||| || | | ||| ||||| || ||| | || ||||
Sbjct 2250 CAATCTGGAACTCACCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGA 2191
Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577
|| |||| |||| || || ||||| | ||| ||||| || ||||| || || | || |
Sbjct 2190 AACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACA 2131
Query 22578 GCGAGTTTCTCAAGCCGTG--CTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAG 22635
||||||||||| ||||| || ||| || | || | | ||| ||||||||| |
Sbjct 2130 AAGAGTTTCTCAACCCGTGGGCTCTGATCTTCTCCTTCAGGGAATC--CCAGTCCCATAA 2073
Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGG 22693
|||| ||| || || |||| | ||| | || | ||| || |||| || ||
Sbjct 2072 GTCGGTAGGCTTC---TTACCCCAGAGGTCGAACTGGAGCACACCTTGCGAT--GCTGGT 2018
Query 22694 CTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC 22753
||| || || || ||||| ||||| | | || | ||| | ||| || |
Sbjct 2017 GAGCCCTCATAGGTCTCGTAGGGACCCTCCTTGATTGCCAACTCGACGGACGCTTCAAGT 1958
Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCT 22809
|| | | || || || ||||| |||| ||||||| || || || ||
Sbjct 1957 GCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAG--- 1901
Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869
||| | |||| | | | || ||| ||||| |||| ||| || || || | | | ||
Sbjct 1900 -TCGAAAGGCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAAT 1842
Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGAT 22929
||||| |||| ||| || || |||||| || | |||||| |||| ||||||
Sbjct 1841 CGGTCTGTTTCTCATGTTAGATCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGAT 1782
Query 22930 TGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA 22989
|| |||||||||| ||| |||| || | || ||||||| |||
Sbjct 1781 GATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTA 1722
Query 22990 A----ACGCCCGATTGTA-----CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCA 23040
| | ||| || | ||||| | || | ||| || | || ||
Sbjct 1721 CCAGGAAGTGTGATCGTCACTCTCGACAAAGGCAGGCAACGCAACCGAAGCCAAGTTACA 1662
Query 23041 TACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTT 23100
|| || || || || || || | || || ||||| || ||| | ||| | | ||
Sbjct 1661 GACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTT 1602
Query 23101 TATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTA 23160
||| | ||||| || |||||| |||| || || | ||||||||||||||| |
Sbjct 1601 GATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAA 1542
Query 23161 CGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC 23220
|| || ||||| || || | || | ||||| ||||| | || || | |
Sbjct 1541 AGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGAT 1482
Query 23221 ACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCA 23278
||| | ||||| | |||| ||||| ||| || | | | || || ||| ||
Sbjct 1481 G-GTCTTTC-TACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCA 1424
Query 23279 CCGTAACAGTCGGCCAGGCCGGGCGATTGCA-TCGGACACATGAGACTCCACAT-TGAGT 23336
||||| ||||| || ||| || || || | || | | ||| |||| ||| |
Sbjct 1423 CCGTAGACGTCGGACAAGCCTGG-GACCTCACTTGGGGAGAAAAGAGTCCATTCCTGATT 1365
Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396
| | ||||| | |||| || | || |||||||| | || ||||| || | ||
Sbjct 1364 C-TGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGG 1306
Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456
| | | || || || ||| ||||||| ||| || | ||||| || | || | |
Sbjct 1305 CTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGT 1246
Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516
|||| ||||| || || | ||||| || || ||||| || || || || || ||||| |
Sbjct 1245 GCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACAT 1186
Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576
| | ||||||||||||| | || | | ||| || | || ||||||||| | |||
Sbjct 1185 ATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGG 1126
Query 23577 CGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636
|| || | || ||| | |||| | |||||| | ||| ||||| || || ||
Sbjct 1125 TACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTG 1066
Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696
| | || || |||| ||| || ||||||| |||||||||||| ||||| || || |
Sbjct 1065 CGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCAT 1006
Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756
||| | |||||||||||||| || ||||| || | | || ||| | || |||||
Sbjct 1005 CTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACA 946
Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGG 23816
|| || ||||| || ||||||| || ||||| | ||||| || |||||||||
Sbjct 945 AGGTAGGAGAAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGC 886
Query 23817 CATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT 23876
|||||||| || ||||| ||||||| ||||| | ||| |||| || || ||||| |
Sbjct 885 TCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTT 826
Query 23877 CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAAT 23936
| | | ||| | | | | || || || || | | | || || || || || |
Sbjct 825 CCGCAATCTTGCCATCCAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGT 766
Query 23937 AGTCATAGTTAAAGTCACGATCGT 23960
| | ||||| |||||||| ||||
Sbjct 765 AATTGTAGTTGAAGTCACGGTCGT 742
>seq183
Length=27355
Score = 275 bits (304), Expect = 6e-69
Identities = 611/902 (68%), Gaps = 25/902 (3%)
Strand=Plus/Plus
Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599
||||| | || ||||| | || | || || ||| | |||||||| |||||||| ||
Sbjct 25925 TTTGTGCTTTTCCCGATCAAGTACCACGAGATATGGCAGATGTACAAGAAGGCAGAGGCC 25984
Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG---GATTCC 57656
|| |||||||||| ||| || | || || || ||||| ||| ||| ||| ||
Sbjct 25985 TCTTTTTGGACCGCCGAGGAGATCGATCTCTCAAAGGACCTGCACGACTGGAACGAGAGG 26044
Query 57657 CTCAAAGAATCTGAGAGAAATTTTAT-TAAACACGTGTTGGCGTTTTTCGCCGCATCCGA 57715
| || || |||||| | || || | | | ||||||||||| || ||||| || ||
Sbjct 26045 TTGAACGACAACGAGAGATACTTCATCTCGAGA-GTGTTGGCGTTCTTTGCCGCTTCGGA 26103
Query 57716 TGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGC 57775
|| ||||| |||||||| ||||| || | || || ||| ||||| ||| |||||||
Sbjct 26104 CGGGATTGTGAACGAGAACTTGGTGGAGAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGC 26163
Query 57776 GAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCT 57835
| || || ||||| || || | || || ||| | || || || | ||| ||| |
Sbjct 26164 AAAGTGTTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGTT 26223
Query 57836 ACTCATCGATACGTACGTGAAGGACAACGACGAGAAAC-GTAGACTGTTCAACGCGATCG 57894
| ||||| |||||||||||||| | ||||| ||| || |||||||||||||
Sbjct 26224 GTTGATCGACACGTACGTGAAGGATCCGAAGGAGAACGAGTAC-CTCTTCAACGCGATCG 26282
Query 57895 AAACAATGCCCGCG-ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCC 57953
| | || |||| | ||| ||||||| |||||| | ||| |||||| || || |
Sbjct 26283 ATAACAT-CCCGTGCATCAAGGAGAAGGCCGAGTGGGCGCTCAGATGGATCAA---CGAC 26338
Query 57954 ACGGCCACGTTC---GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTT 58010
| || |||| | |||| | | | ||||| |||||||| || || || |||||
Sbjct 26339 AAGGATGCGTTGTTTGGCGAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTC 26398
Query 58011 TCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACG 58070
|||||| |||||| | || || ||| ||||||| || || || ||||||||| |||||
Sbjct 26399 TCGGGCTCGTTTGCGTCGATCTTCTGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACG 26458
Query 58071 TTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATG 58130
|| ||||||||||| | || |||||||| | || || || ||||| ||| | ||
Sbjct 26459 TTCTCGAACGAGTTGATCTGTCGGGACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTG 26518
Query 58131 TACTCTCACATTGTCAATAA-ACC---GACGCG-GGATCGCATCTTGGACATTATCACCG 58185
| ||| ||| | ||||| ||| |||| | ||| | || | || |||||||
Sbjct 26519 TTCTCGCAC---CTGAATAACACCCCGGACGAGACGATTG--TCCGCAAGATCATCACCG 26573
Query 58186 AGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTA 58245
|||| || | ||||| || | |||| || ||| | || || | || | || |
Sbjct 26574 AGGCCGTTGATATCGAGAAGCGCTACTTCACTGACGCCTTGCCCGTCAACTTGTTGGGCA 26633
Query 58246 TGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAAC 58305
||||||| || ||||||| ||||| | |||||||| |||||| | | || ||| |
Sbjct 26634 TGAACAAGGACTTGATGTGCCAGTACGTCGAGTTTGTCGCCGACCGCTTGTTTGTCGCCC 26693
Query 58306 TGATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGC 58365
| | || || |||||| | || || || ||||| ||| | || ||||
Sbjct 26694 TCGGCTGCGACAAGCACTACAACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGC 26753
Query 58366 TCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGA 58425
| | ||||| || ||||| ||||| || || ||| ||||| || |||||| |
Sbjct 26754 TTGCCGGCAAAACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCAGAAGGCCGGCGTCA 26813
Query 58426 TG 58427
||
Sbjct 26814 TG 26815
>seq97
Length=66064
Score = 114 bits (126), Expect = 1e-20
Identities = 164/231 (71%), Gaps = 0/231 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| |||||||||||||| || || || || || || || || ||| | || ||||| |
Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
||||||| | | || | ||||| || | ||| ||||||||||| | || || |||
Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||| | | || |||||||| || || |||||||| || ||| | ||| ||
Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420
||||| ||||| ||||| ||| | || |||| | ||| |||| || |||
Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGT 5473
>seq138
Length=17849
Score = 98.7 bits (108), Expect = 9e-16
Identities = 161/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249
|| ||||||||||| || ||||| | || || || || || ||| | || || ||| |
Sbjct 9498 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCT 9557
Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309
|| |||| | |||| | ||||| || | || || |||||||| | || || |||
Sbjct 9558 TCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGAC 9617
Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369
||||| | || || || || || || || || ||||| || ||| || ||| ||
Sbjct 9618 CAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTAC 9677
Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421
||||| ||||||||||| || | || |||| | ||| |||| || ||||
Sbjct 9678 AACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGTA 9729
>seq30
Length=26055
Score = 93.3 bits (102), Expect = 4e-14
Identities = 137/194 (71%), Gaps = 0/194 (0%)
Strand=Plus/Plus
Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412
|||||| ||||| ||||||||||| || |||||| | | || | || ||||| ||
Sbjct 3090 CATAAAGAGATCGGGTATCCATAGCGCTAAGAACAAGCCTCTAGCTCTCATTTCCTCCTT 3149
Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472
||| ||| ||| ||||||||||||| || || || || |||||| ||||| | ||
Sbjct 3150 ACCGTGGTTTTTTCTCAAATCCAAAAATTCGAAAACATCGCTATGCCAAGGCTCTAAATA 3209
Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532
| || || || || || || |||||||| |||||||| || ||| ||| |
Sbjct 3210 TATACAGAATGCTCCTGGCCTTTTGTTGCCGCCTTGATCGACATATTTGGCGGTGGATTC 3269
Query 23533 GTACACTCTTAGCA 23546
||||| ||||||
Sbjct 3270 AAACACTTTTAGCA 3283
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 445763491374240
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