Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq95 311 8e-80 seq183 275 6e-69 seq97 114 1e-20 seq138 98.7 9e-16 seq30 93.3 4e-14 >seq95 Length=34527 Score = 311 bits (344), Expect = 8e-80 Identities = 1209/1884 (64%), Gaps = 58/1884 (3%) Strand=Plus/Minus Query 22109 TCCACTGTAAACTGTATGGCGTTTGCGGCCGGTTTGGTGCGAAGATAATACATGCCCGTC 22168 || |||||||| || |||||| || || | || ||| | || || ||||| || ||| Sbjct 2599 TCAACTGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGTC 2540 Query 22169 TTCAGACCCATCTTCCACGCGTAAAAATGTATCGACGTCAATTTTCC-ATAACTCGG--- 22224 |||| ||| ||||||| |||| || || ||||| ||||| || || || | || Sbjct 2539 TTCAACCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTTC 2480 Query 22225 --CAAGTCCATGTACACATTGAACGACTGACTCTGATCGATAAACGCTCCTCGATCGGCG 22282 ||||| |||| || || |||||| ||| ||||| |||| |||| || || Sbjct 2479 TTCAAGTGGATGTTCA---TG---GACTGAGACTGGTCGATGTACGCACCTCTGTCAGCC 2426 Query 22283 GCCATATTTATCAATGTACGCATC----GACATTTCCCATACGGTCTTGTACAGTTGCCT 22338 ||||| | | ||| ||| | | || ||||| |||||||| |||| | | | Sbjct 2425 GCCATGT----CGATGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTCCTT 2370 Query 22339 GATCTCTAACGGTATCGATTCGATCCT-CTGGACGGACCCGTTATTGTGTATGATCAAAT 22397 ||| || || || | || || | ||||| ||| ||||| | | ||||| | Sbjct 2369 GATTTCCTGTGGGAT-GTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGT 2311 Query 22398 TTTTAATCGTATCGTTCCACAAACCGATGGCGGTCAAATCTTTGACCAGATGACGGTTCA 22457 | || || | |||||||| | || || | ||| ||| | | || | |||||| Sbjct 2310 TCTTCATAGAGTCGTTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCA 2251 Query 22458 CCACTTGAAACTCGCCGGACAAGACGCGGCGTTGGTAAATGTTGGATGTGAACGGTTCGA 22517 | | || ||||| |||| ||| || | | ||| ||||| || ||| | || |||| Sbjct 2250 CAATCTGGAACTCACCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGA 2191 Query 22518 AAGATTCATTGTTTCCCAGTATCTGAGCGGTCGAAGCGGTCGGCATCGGCGCCAACAGTA 22577 || |||| |||| || || ||||| | ||| ||||| || ||||| || || | || | Sbjct 2190 AACATTCGTTGTAACCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACA 2131 Query 22578 GCGAGTTTCTCAAGCCGTG--CTTTGAAATTTTACTCTTGAGCATCGACCAGTCCCACAG 22635 ||||||||||| ||||| || ||| || | || | | ||| ||||||||| | Sbjct 2130 AAGAGTTTCTCAACCCGTGGGCTCTGATCTTCTCCTTCAGGGAATC--CCAGTCCCATAA 2073 Query 22636 ATCGGACGGCGTCACATTGTCCCACATATCGTATTGCAACACGCC--GCGACTCGCCGGG 22693 |||| ||| || || |||| | ||| | || | ||| || |||| || || Sbjct 2072 GTCGGTAGGCTTC---TTACCCCAGAGGTCGAACTGGAGCACACCTTGCGAT--GCTGGT 2018 Query 22694 CTGCCTTCGTACGTTTCGTACGGACCATATATCGCGGCAAGTTCGCAGCTCGCCTCCAAC 22753 ||| || || || ||||| ||||| | | || | ||| | ||| || | Sbjct 2017 GAGCCCTCATAGGTCTCGTAGGGACCCTCCTTGATTGCCAACTCGACGGACGCTTCAAGT 1958 Query 22754 GCGCCGTAATATATAGTCTCGAAGATTTTCTTGTTCAATTCGGCGGC----GGCGACGCT 22809 || | | || || || ||||| |||| ||||||| || || || || Sbjct 1957 GCAGCATGGTAGATTGTTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAG--- 1901 Query 22810 TTCGTACGGCATACGCATCATCACGAACGCGTCCGCCATACCCTGAACGCCTATACCGAT 22869 ||| | |||| | | | || ||| ||||| |||| ||| || || || | | | || Sbjct 1900 -TCGAAAGGCAGTCTGAGGAGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAAT 1842 Query 22870 CGGTCGGTTTTTCAGATTCGACACTTTTGCCTCGGGCAAAGGATACCAATTCGAATCGAT 22929 ||||| |||| ||| || || |||||| || | |||||| |||| |||||| Sbjct 1841 CGGTCTGTTTCTCATGTTAGATCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGAT 1782 Query 22930 TGTTCTGTTCAAGTTTCTGGTCACAATTTTCGTTATNNNNNNNNNNNNNTCAAAGTCGTA 22989 || |||||||||| ||| |||| || | || ||||||| ||| Sbjct 1781 GATTTTGTTCAAGTTCTTGGCAACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTA 1722 Query 22990 A----ACGCCCGATTGTA-----CAACAAACTTGTTGACGGCGATCGAGGCAAGATTGCA 23040 | | ||| || | ||||| | || | ||| || | || || Sbjct 1721 CCAGGAAGTGTGATCGTCACTCTCGACAAAGGCAGGCAACGCAACCGAAGCCAAGTTACA 1662 Query 23041 TACGGCCACCTCGTCTTTGGACGTGTACTCTACAATTTCGGTACATAGATTGCTACACTT 23100 || || || || || || || | || || ||||| || ||| | ||| | | || Sbjct 1661 GACAGCGACTTCATCGTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTT 1602 Query 23101 TATCGTGCCCAAATTGCTCTGGTTGCTTTTTCGATTGCACGAATCCTTGTAGAGCATGTA 23160 ||| | ||||| || |||||| |||| || || | ||||||||||||||| | Sbjct 1601 GATCATACCCAAGTTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAA 1542 Query 23161 CGGCGTGCCCGTCTCGACCTGCGACTCGATGATCGCTCGCCACATAGTCTGAGCGTGAAC 23220 || || ||||| || || | || | ||||| ||||| | || || | | Sbjct 1541 AGGAGTACCCGTTTCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGAT 1482 Query 23221 ACGTCGCACGTACCT--GCCTTCTTCCTCGTACTTTTGGTACAACGCGTCAAATTCGGCA 23278 ||| | ||||| | |||| ||||| ||| || | | | || || ||| || Sbjct 1481 G-GTCTTTC-TACCTCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCA 1424 Query 23279 CCGTAACAGTCGGCCAGGCCGGGCGATTGCA-TCGGACACATGAGACTCCACAT-TGAGT 23336 ||||| ||||| || ||| || || || | || | | ||| |||| ||| | Sbjct 1423 CCGTAGACGTCGGACAAGCCTGG-GACCTCACTTGGGGAGAAAAGAGTCCATTCCTGATT 1365 Query 23337 CATTTTCAACGCGTCTCATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGG 23396 | | ||||| | |||| || | || |||||||| | || ||||| || | || Sbjct 1364 C-TGCTCAACTCTCTTCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGG 1306 Query 23397 CGCGCACCTCCTCTTTGCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCAT 23456 | | | || || || ||| ||||||| ||| || | ||||| || | || | | Sbjct 1305 CTCTGATTTCTTCCTTACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGT 1246 Query 23457 GCCACGGCTCGAGGTAAACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGT 23516 |||| ||||| || || | ||||| || || ||||| || || || || || ||||| | Sbjct 1245 GCCATGGCTCAAGATAGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACAT 1186 Query 23517 AACGGGCCGTGTTGTTGTACACTCTTAGCATCGGCACGAGACCGTTGGACGCGCCGCCTA 23576 | | ||||||||||||| | || | | ||| || | || ||||||||| | ||| Sbjct 1185 ATCTGGCCGTGTTGTTGAAAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGG 1126 Query 23577 CGCCCGCCACACTCGAACCTTTTGCTCGAACGTTGTGAACGTGGAAACCTATGCCTCCGC 23636 || || | || ||| | |||| | |||||| | ||| ||||| || || || Sbjct 1125 TACCTGCAATGTAGGAGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTG 1066 Query 23637 CCGATTTCGATATCATCGCGCATTGTTTCAGAGTGTCGTAGATGCCCTCGATGCTGTCCT 23696 | | || || |||| ||| || ||||||| |||||||||||| ||||| || || | Sbjct 1065 CGGTCTTGGAGATCAGCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCAT 1006 Query 23697 CTTTGGTCGCGACCAAGAAACACGAAGACATTTGCGCTTTGGGCGTAGCGGCCGAGAACA 23756 ||| | |||||||||||||| || ||||| || | | || ||| | || ||||| Sbjct 1005 CTTGCATTGCGACCAAGAAACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACA 946 Query 23757 GTGTCGGGCTGGCGTGCGTAAAGTATCCATTCGACATTAGATTGTACGTGTCGATGGCGG 23816 || || ||||| || ||||||| || ||||| | ||||| || ||||||||| Sbjct 945 AGGTAGGAGAAGCGTGAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGC 886 Query 23817 CATCAATGTCCTCTCCGTGTATACCGATGGCGACGCGCATCATCATGTATTGAGGTCTCT 23876 |||||||| || ||||| ||||||| ||||| | ||| |||| || || ||||| | Sbjct 885 TCTCAATGTCGTCGCCGTGAATACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTT 826 Query 23877 CGACCGTGACGCCGTTAATTTTGAACAGATATGAACGTTGCATCGTTTTAAATCCAAAAT 23936 | | | ||| | | | | || || || || | | | || || || || || | Sbjct 825 CCGCAATCTTGCCATCCAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGT 766 Query 23937 AGTCATAGTTAAAGTCACGATCGT 23960 | | ||||| |||||||| |||| Sbjct 765 AATTGTAGTTGAAGTCACGGTCGT 742 >seq183 Length=27355 Score = 275 bits (304), Expect = 6e-69 Identities = 611/902 (68%), Gaps = 25/902 (3%) Strand=Plus/Plus Query 57540 TTTGTCATGTTTCCGATTGAATATCCAGACATTTGGAACATGTACAAAAAGGCAGAAGCA 57599 ||||| | || ||||| | || | || || ||| | |||||||| |||||||| || Sbjct 25925 TTTGTGCTTTTCCCGATCAAGTACCACGAGATATGGCAGATGTACAAGAAGGCAGAGGCC 25984 Query 57600 TCGTTTTGGACCGTCGAAGAAGTAGACCTGTCTAAGGATCTGAGCGATTGG---GATTCC 57656 || |||||||||| ||| || | || || || ||||| ||| ||| ||| || Sbjct 25985 TCTTTTTGGACCGCCGAGGAGATCGATCTCTCAAAGGACCTGCACGACTGGAACGAGAGG 26044 Query 57657 CTCAAAGAATCTGAGAGAAATTTTAT-TAAACACGTGTTGGCGTTTTTCGCCGCATCCGA 57715 | || || |||||| | || || | | | ||||||||||| || ||||| || || Sbjct 26045 TTGAACGACAACGAGAGATACTTCATCTCGAGA-GTGTTGGCGTTCTTTGCCGCTTCGGA 26103 Query 57716 TGGTATTGTTAACGAGAATTTGGTCGAAAGATTTTCACAAGAAGTGCAAGTGACGGAGGC 57775 || ||||| |||||||| ||||| || | || || ||| ||||| ||| ||||||| Sbjct 26104 CGGGATTGTGAACGAGAACTTGGTGGAGAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGC 26163 Query 57776 GAGATGCTTTTACGGATTTCAAGTGGCCATTGAAAACGTGCATTCAGAAATGTATTCGCT 57835 | || || ||||| || || | || || ||| | || || || | ||| ||| | Sbjct 26164 AAAGTGTTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGTT 26223 Query 57836 ACTCATCGATACGTACGTGAAGGACAACGACGAGAAAC-GTAGACTGTTCAACGCGATCG 57894 | ||||| |||||||||||||| | ||||| ||| || ||||||||||||| Sbjct 26224 GTTGATCGACACGTACGTGAAGGATCCGAAGGAGAACGAGTAC-CTCTTCAACGCGATCG 26282 Query 57895 AAACAATGCCCGCG-ATCGCCAAGAAGGCAGAGTGGTCAATCAAATGGATAAAAAGCGCC 57953 | | || |||| | ||| ||||||| |||||| | ||| |||||| || || | Sbjct 26283 ATAACAT-CCCGTGCATCAAGGAGAAGGCCGAGTGGGCGCTCAGATGGATCAA---CGAC 26338 Query 57954 ACGGCCACGTTC---GCCGAGAGGCTAATCGCGTTCGCCGCCGTCGAAGGTATATTCTTT 58010 | || |||| | |||| | | | ||||| |||||||| || || || ||||| Sbjct 26339 AAGGATGCGTTGTTTGGCGAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTC 26398 Query 58011 TCGGGCAGCTTTGCGGCAATATTTTGGATGAAGAAACGCGGCCTGATGCCCGGCCTGACG 58070 |||||| |||||| | || || ||| ||||||| || || || ||||||||| ||||| Sbjct 26399 TCGGGCTCGTTTGCGTCGATCTTCTGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACG 26458 Query 58071 TTTAGCAACGAGTTGATATCGCGCGACGAGGGTCTCCATACTGATTTTGCGTGCCTAATG 58130 || ||||||||||| | || |||||||| | || || || ||||| ||| | || Sbjct 26459 TTCTCGAACGAGTTGATCTGTCGGGACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTG 26518 Query 58131 TACTCTCACATTGTCAATAA-ACC---GACGCG-GGATCGCATCTTGGACATTATCACCG 58185 | ||| ||| | ||||| ||| |||| | ||| | || | || ||||||| Sbjct 26519 TTCTCGCAC---CTGAATAACACCCCGGACGAGACGATTG--TCCGCAAGATCATCACCG 26573 Query 58186 AGGCGGTCGCGATCGAAAATGAGTTTGTCACCGAAGCCCTACCGGTGGCCATGCTCGGTA 58245 |||| || | ||||| || | |||| || ||| | || || | || | || | Sbjct 26574 AGGCCGTTGATATCGAGAAGCGCTACTTCACTGACGCCTTGCCCGTCAACTTGTTGGGCA 26633 Query 58246 TGAACAATGATTTGATGTCAAAGTACATTGAGTTTGTTGCCGACAGACTTTTGCTCGAAC 58305 ||||||| || ||||||| ||||| | |||||||| |||||| | | || ||| | Sbjct 26634 TGAACAAGGACTTGATGTGCCAGTACGTCGAGTTTGTCGCCGACCGCTTGTTTGTCGCCC 26693 Query 58306 TGATTGGAGAGCGTCATTACAACACGAAAAATCCGTTTGATTTTATGAATCTGATCTCGC 58365 | | || || |||||| | || || || ||||| ||| | || |||| Sbjct 26694 TCGGCTGCGACAAGCACTACAACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGC 26753 Query 58366 TCGAGGGCAAGACAAACTTTTTCGaaaaaaaaGTTAGCGAATATCAAAAATACGGCGTGA 58425 | | ||||| || ||||| ||||| || || ||| ||||| || |||||| | Sbjct 26754 TTGCCGGCAAAACCAACTTCTTCGAGAAGCGGGTCTCCGACTATCAGAAGGCCGGCGTCA 26813 Query 58426 TG 58427 || Sbjct 26814 TG 26815 >seq97 Length=66064 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || |||||||||||||| || || || || || || || || ||| | || ||||| | Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 ||||||| | | || | ||||| || | ||| ||||||||||| | || || ||| Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||| | | || |||||||| || || |||||||| || ||| | ||| || Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGT 31420 ||||| ||||| ||||| ||| | || |||| | ||| |||| || ||| Sbjct 5423 AACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGGT 5473 >seq138 Length=17849 Score = 98.7 bits (108), Expect = 9e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Plus Query 31190 AACATGCAAATTTTCGTAAAGACTCTGACAGGCAAAACGATCACCGTCGACGTTGAACCG 31249 || ||||||||||| || ||||| | || || || || || ||| | || || ||| | Sbjct 9498 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCT 9557 Query 31250 TCCGACAGTGTCGAAACGGTCAAACAGAGAATAGCGGACAAGGAAGGCGTGCCGCCCGAC 31309 || |||| | |||| | ||||| || | || || |||||||| | || || ||| Sbjct 9558 TCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGAC 9617 Query 31310 CAGCAGCGTCTAATATTCGCTGGCAAACAGTTGGAAGACTCTATGACTATGAGCGATTAT 31369 ||||| | || || || || || || || || ||||| || ||| || ||| || Sbjct 9618 CAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTAC 9677 Query 31370 AACATTCAAAAAGAATCGACTCTTCATCTGGTACTTAGACTGAGGGGCGGTA 31421 ||||| ||||||||||| || | || |||| | ||| |||| || |||| Sbjct 9678 AACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGGTA 9729 >seq30 Length=26055 Score = 93.3 bits (102), Expect = 4e-14 Identities = 137/194 (71%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 23353 CATAAAAAGATCCGGTATCCATAGAGCGTAGAACAGTTCGCGGGCGCGCACCTCCTCTTT 23412 |||||| ||||| ||||||||||| || |||||| | | || | || ||||| || Sbjct 3090 CATAAAGAGATCGGGTATCCATAGCGCTAAGAACAAGCCTCTAGCTCTCATTTCCTCCTT 3149 Query 23413 GCCGGTGTTCTTTTTCAAATCCAAAAAGTCCAACACGTCCGCATGCCACGGCTCGAGGTA 23472 ||| ||| ||| ||||||||||||| || || || || |||||| ||||| | || Sbjct 3150 ACCGTGGTTTTTTCTCAAATCCAAAAATTCGAAAACATCGCTATGCCAAGGCTCTAAATA 3209 Query 23473 AACGGCAAACGCGCCCGGTCTCTTATTGCCGCCCTGATCGACGTAACGGGCCGTGTTGTT 23532 | || || || || || || |||||||| |||||||| || ||| ||| | Sbjct 3210 TATACAGAATGCTCCTGGCCTTTTGTTGCCGCCTTGATCGACATATTTGGCGGTGGATTC 3269 Query 23533 GTACACTCTTAGCA 23546 ||||| |||||| Sbjct 3270 AAACACTTTTAGCA 3283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445763491374240