Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_003663.2 Length=224499 Score E Sequences producing significant alignments: (Bits) Value seq95 289 4e-73 seq183 185 1e-41 >seq95 Length=34527 Score = 289 bits (320), Expect = 4e-73 Identities = 1195/1867 (64%), Gaps = 41/1867 (2%) Strand=Plus/Minus Query 78717 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 78776 ||| ||||| |||| || | |||| || || | || |||||||| || || || | Sbjct 2594 TGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGTCTTCAA 2535 Query 78777 ACCGAGACTCCATCCGTAGAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTA 78835 || |||| |||||||| ||||| || | ||| || | || ||| | | Sbjct 2534 CCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTTCTTCAA 2475 Query 78836 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 78895 ||||| ||||| || ||| || |||||| | || || ||||| || ||||| | | Sbjct 2474 G-TGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCGCCATGTCGA 2416 Query 78896 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 78954 |||||| ||| ||||| || ||||| | || ||||| || || ||| || || | ||| Sbjct 2415 TGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTC-CTTGATTTCCTGTGGG 2357 Query 78955 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCTTCA 79011 | ||||| | ||||| ||||| || || | || || ||||| || || Sbjct 2356 ATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCATAGAGTCG 2297 Query 79012 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 79071 ||||||| | |||| || |||| | | | || || || | || || || Sbjct 2296 TTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCTGGAACTCA 2237 Query 79072 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATATGGTTCCACCGATTCATTATTT 79131 || | ||| ||||| | || ||| || || ||| ||||| || | |||| || | Sbjct 2236 CCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTAA 2177 Query 79132 CCCAAAATTTGAGCAGTTGATGCCGTTGGCATAGGTGCCACCAATAAACTATTTCTAAGA 79191 || | ||| || | || || || |||||||| || || ||||| ||| ||||| | Sbjct 2176 CCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGTTTCTCAAC 2117 Query 79192 CCGTATGATCTGATTTTATCTTTTAGAGATTCCCAATCCCAAAGATCAGACGGGACAACA 79251 |||| | |||||| || || || || || ||||| ||||| | || | || | Sbjct 2116 CCGTGGGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTAGGCTTCTTA 2057 Query 79252 TTCCAAAGATCATATTGTAGAATACCGTTACTA-GCGTATGATCCTGTGTATGTTTCATA 79310 ||| || || | || || | ||| || | | || ||| || || || || || Sbjct 2056 CCCCAGAGGTCGAACTGGAGCACACC-TTGCGATGCTGGTGAGCCCTCATAGGTCTCGTA 1998 Query 79311 AGGTCCTTCCTTTTCGGCTAATTCACAACTCGCCTCTAATGCTCCGTAATAAATGGTTTC 79370 || || ||||| || || || ||| || | ||| | | || || ||||| Sbjct 1997 GGGACCCTCCTTGATTGCCAACTCGACGGACGCTTCAAGTGCAGCATGGTAGATTGTTTC 1938 Query 79371 GAAAATCTTCTTATTGAGATCTTGTGCTTCTAGGCTATCAAATGGATAATTTAAGAGAAT 79430 |||||| | | || | || | ||| ||| | || || || | | ||| || Sbjct 1937 GAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGCAGTCTGAGGAGCAT 1878 Query 79431 AAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTAGAAAT 79490 || ||||| || || ||||| ||||||| | | || ||||| | |||| | ||||| | Sbjct 1877 GAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTTCTCATGTTAGATCT 1818 Query 79491 TTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTCCTGACTAT 79550 || || |||| |||||| ||||| | ||| || ||||| || | ||| || | | Sbjct 1817 CCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGTTCAAGTTCTTGGCAAC 1758 Query 79551 TACTTTGACCACATCCTTTAGTTTGAGAAAATC--------AA-----ATCGTCCATCTA 79597 || ||| | | || | | ||| ||| | || |||||| ||| Sbjct 1757 AACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGAAGTGTGATCGTCACTCTC 1698 Query 79598 TTACAAA--CATGTTCAACGCGACAGATGCCAGATTACAAACGGCTACCTCATTAGCATC 79655 ||||| || | |||||| || || |||| ||||| || || || |||| | | Sbjct 1697 G-ACAAAGGCAGG--CAACGCAACCGAAGCCAAGTTACAGACAGCGACTTCAT---CGTT 1644 Query 79656 CGCA---TATTGTATTATTTCAGTGCAGAGGTTACTACACTTAATGGTTCCTAAATTTTG 79712 || | |||| | || ||| || | ||| | | || || | || || || || Sbjct 1643 CGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCCAAGTTCTG 1584 Query 79713 TTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAACGGAGTACCAGTTTCAAT 79772 ||| || ||| ||||||| || ||||| || || ||||| |||||||| |||||| | Sbjct 1583 TTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCCGTTTCAGT 1524 Query 79773 CTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGACTTGTATCTCT- 79831 || | ||| | |||| | ||| | | | ||||| || | || || |||| Sbjct 1523 TTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGTCT--TTCTACCTCTG 1466 Query 79832 -TTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAACATCGTCTAAT 79890 ||||||||||||||| |||||||| |||||||||||| || | || ||| || Sbjct 1465 TTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGGACAAG 1406 Query 79891 CCAGG-ACATT-CGTCAGGACACATCAACGACCACTCTCCATCATCCTTTACTCGTTTCA 79948 || || || | | | ||| | | | | ||| || || | || |||| |||| Sbjct 1405 CCTGGGACCTCACTTGGGGAGAAAAGA--GTCCATTCCTGATTCTGCTCAACTCTCTTCA 1348 Query 79949 TAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTC 80008 | || | ||||| ||||| | || || | ||||||| ||| || || || | Sbjct 1347 TGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTGATTTCTTCCTTAC 1288 Query 80009 CTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATA 80068 | |||||| | | |||| ||| | | ||||| || ||||| || || | || | Sbjct 1287 CGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGATAGA 1228 Query 80069 TGGCCATAACTCCCGGTCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTAT 80128 || | | || |||| |||||| || || || || | ||||| || ||||| || Sbjct 1227 GCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGTTGA 1168 Query 80129 AAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCGGAGATATAGCTTC 80188 |||| | || ||||||||| ||||| ||||| ||||| ||||| || | || ||| | Sbjct 1167 AAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGGAGC 1108 Query 80189 CACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATG 80248 | |||| | || || || | ||| || || ||||| | || ||||| | | Sbjct 1107 CTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCAGCG 1048 Query 80249 CGCATCGTTTTAACGTATCATAGATGCCCTCTATGCTATCATCAATCATGTTAAGTAGAA 80308 | || |||| || || || ||||| ||||| || |||||| ||| | | | Sbjct 1047 CACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCAAGA 988 Query 80309 AACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCG 80368 ||||| ||||| |||| | || || || || || ||||||||||||||||| | Sbjct 987 AACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAG 928 Query 80369 TAAACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGAT 80428 | || || | | ||||| | ||||| ||||| || || || || || | Sbjct 927 TGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGT 868 Query 80429 GAATTCCTACCGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTATTTA 80488 |||| || || ||||| | ||| | || |||||| |||||||| | |||||| || | Sbjct 867 GAATACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCATCCA 808 Query 80489 TTTTCAACAAGTAAGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTC 80548 | |||| | ||| ||| | || | || || || || || || ||||| ||||| | Sbjct 807 ATCTCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAATTGTAGTTGAAGTCAC 748 Query 80549 GTTCGTA 80555 | ||||| Sbjct 747 GGTCGTA 741 >seq183 Length=27355 Score = 185 bits (204), Expect = 1e-41 Identities = 404/599 (67%), Gaps = 12/599 (2%) Strand=Plus/Minus Query 49951 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCGTCTCTACTAATTAGTTCGTTGGAA 50010 |||| ||| || || || ||| ||||| |||||||| | || || | ||||| || Sbjct 26520 AACAACAAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAG 26461 Query 50011 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATGGACGCAAATGACCCA 50070 ||||| | |||||||| || || ||||| || | ||| || || |||||||| || || Sbjct 26460 AACGTCAAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCC 26401 Query 50071 GAAAAGAAGATTCCTTCTACTGCGGCAAAGGCAACAAGTCTCTCTCCATAACTGGCGC-- 50128 || ||||| || || || || |||||||| || || | | ||| ||| ||| ||| Sbjct 26400 GAGAAGAAAATCCCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCA-AACAA-CGCAT 26343 Query 50129 ---TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTT 50185 |||| | ||||| | | ||||| |||||||||| || | || || || | | Sbjct 26342 CCTTGTCGTTGATCCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTAT 26283 Query 50186 CTATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATAAGTATCGATCAAAA 50245 | || || || ||||| || | || || || ||| || || || || |||||||| | Sbjct 26282 CGATCGCGTTGAAGAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACA 26223 Query 50246 GACTA-TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTA 50304 || | ||| | ||||| || ||||| || || ||||| || ||||||||||| | Sbjct 26222 -ACGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAACACTTT 26164 Query 50305 GCCTCGGTAATCTGCACTTCTGTACAAAATCGTTCAGCTAAATTTTCATTCACTATTCCG 50364 ||||| | | |||||| |||| | || || | || || || ||||| || ||| Sbjct 26163 GCCTCCGGCACCTGCACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCG 26104 Query 50365 TCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATGTTTTTCGTTGGGTGTTA-- 50422 || || ||||| |||||||| || || || | | | |||||| | | Sbjct 26103 TCCGAAGCGGCAAAGAACGCCAACACTCTCGAGATGAAGTATCTCTCGTTGTCGTTCAAC 26044 Query 50423 -GTTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCCACTGTCCAAAATGAT 50481 | ||||| || | | || || || | ||| | || || | |||||||| || Sbjct 26043 CTCTCGTTCCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAAAAAGAG 25984 Query 50482 GCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGGATTGGGAAAATAACAAA 50540 ||||||||||| || ||||| | ||| || || || || | ||| ||||||| ||||| Sbjct 25983 GCCTCTGCCTTCTTGTACATCTGCCATATCTCGTGGTACTTGATCGGGAAAAGCACAAA 25925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 718264113296080