Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq95 217 2e-51 seq183 172 7e-38 seq30 131 2e-25 >seq95 Length=34527 Score = 217 bits (240), Expect = 2e-51 Identities = 1168/1864 (63%), Gaps = 35/1864 (2%) Strand=Plus/Minus Query 70800 TGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGTTTTTAG 70859 |||||| || |||| | | ||||||| || | || |||||||| ||||| || | Sbjct 2594 TGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGTCTTCAA 2535 Query 70860 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAGCTAGGATCGGCTA 70918 || |||| ||||| || ||||| || | ||| || | | || || | | Sbjct 2534 CCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTTCTTCAA 2475 Query 70919 TGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 70978 ||| || ||||| |||||| || |||||| | || || ||||| || ||||| | | Sbjct 2474 -GTGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCGCCATGTCGA 2416 Query 70979 TGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 71037 |||||| ||| ||||| || ||||| | || ||||| || || ||| || || | ||| Sbjct 2415 TGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTC-CTTGATTTCCTGTGGG 2357 Query 71038 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCTCTTCA 71094 | ||||| | ||||| ||||| || || | || || || || || || Sbjct 2356 ATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCATAGAGTCG 2297 Query 71095 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTACTTGAAATTCT 71154 ||||||| | |||| || |||| | | | || || || | || || || Sbjct 2296 TTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCTGGAACTCA 2237 Query 71155 CCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGACTCATTATTT 71214 || | ||| ||||| | || ||| || || ||| || || || | | || || | Sbjct 2236 CCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTAA 2177 Query 71215 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAGACTATTTCTAAGA 71274 || | ||| || | || || ||||| ||||| || || ||||| | | ||||| | Sbjct 2176 CCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGTTTCTCAAC 2117 Query 71275 CCATGTGATCGGATTTTATCTTTTAGAGATTCCCAATTCCAAAGATCCGATGG-----TA 71329 || || | || ||| || || || || || ||||| | ||| | || | || || Sbjct 2116 CCGTGGGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTAGGCTTCTTA 2057 Query 71330 CAACNNNNNNNNNNNNNNNNNNNNNNATGCCGTTACTAGCGTATGATCCTGCATATGTAT 71389 | | ||| | | || | ||| || |||| || | Sbjct 2056 CCCCAGAGGTCGAACTGGAGCACACCTTGC-GATGCTGG----TGAGCCCTCATAGGTCT 2002 Query 71390 CGTATGGTCCTTCTTTTTCGGCTAGTTCACAACTCGCCTCTAATGCTCCATAATAAATGG 71449 |||| || || || || || | || ||| || | ||| ||| || || | Sbjct 2001 CGTAGGGACCCTCCTTGATTGCCAACTCGACGGACGCTTCAAGTGCAGCATGGTAGATTG 1942 Query 71450 TTTCGAAAATCTTCTTATTGAGATCTTGTGCTTCCGGGCTATCAAATGGATAATTTAAGA 71509 |||||||||| | | || | || | ||| || || || || || | | || Sbjct 1941 TTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGCAGTCTGAGGA 1882 Query 71510 GAATAAACGCGTCTGCTAATCCTTGAACGCCAATACCGATAGGTCTGTGTCTCTTATTAG 71569 | || || ||||| || || ||||| || |||| | | || ||||||| |||| | |||| Sbjct 1881 GCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTTCTCATGTTAG 1822 Query 71570 AAATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTGA 71629 | | || || |||| |||||| ||||| | ||| || ||||| || | || || Sbjct 1821 ATCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGTTCAAGTTCTTGG 1762 Query 71630 CTATTACTTTGACCACATCCTTTAGTTTGAGAAAATC--------AA-----ATCTCCCA 71676 | | || ||| | | || | | ||| ||| | || ||| | Sbjct 1761 CAACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGAAGTGTGATCGTCAC 1702 Query 71677 TCTATTACAAACACGTTCAAGGCAACAGATGCCAGATTACAAACGGCTACCTCATTAGCA 71736 ||| ||||| | ||| ||||| || |||| ||||| || || || |||| Sbjct 1701 TCTCG-ACAAAGGCAGGCAACGCAACCGAAGCCAAGTTACAGACAGCGACTTCATCGT-- 1645 Query 71737 TCG--GCATATTGTATAATTTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTT 71794 ||| | ||||| | ||| ||| || | || | | ||||| | || || || | Sbjct 1644 TCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCCAAGTTCT 1585 Query 71795 GTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATAAACGGAGTACCAGTTTCAA 71854 |||| || ||| ||||||| || ||||| || || || || |||||||| |||||| Sbjct 1584 GTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCCGTTTCAG 1525 Query 71855 TCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATATTCTTGTATCTCT 71914 | || | ||| | |||| | ||| | | | ||||| || | || | ||| | Sbjct 1524 TTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGTCTTTCTACCTCTGT 1465 Query 71915 TTTCTCTTTCGTATTGTGTATATAATCGTTCGAACTCGTCTCCCCAAGCATTGTCTAATC 71974 ||||||||||||||| |||||||| |||||||||||| || | | | | || | Sbjct 1464 TTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGGACAAGC 1405 Query 71975 CAGGACATTCATTCGGACACATCAATGACCACTCTCCATCATCATTTACTCGTTTCATAA 72034 | || ||| | || | | | | ||| || || | | |||| ||||| | Sbjct 1404 CTGGGACCTCACTTGGGGAGAAAAGAGTCCATTCCTGATTCTGCTCAACTCTCTTCATGA 1345 Query 72035 AGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGCTCCTCGTTTCCTG 72094 | | ||||| ||||| | || || | ||||||| ||| || || || || Sbjct 1344 ACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTGATTTCTTCCTTACCGT 1285 Query 72095 TATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGG 72154 |||||| | | |||| ||| | | ||||| || ||||| || || | || | | Sbjct 1284 GGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGATAGAGCG 1225 Query 72155 CCATAACTCCCGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAA 72214 | | | || || | |||||| || || || || | ||||| || ||||| || ||| Sbjct 1224 CAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGTTGAAAA 1165 Query 72215 CTCTCAACATTGGAATAATACCATTGGATGCACCATTGGTCCCGGAGATATAGCTTCCAC 72274 | | || ||||||||| ||||| ||||| | ||| ||||| || | || ||| || Sbjct 1164 CACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGGAGCCTG 1105 Query 72275 TGGCACGAATATTGCTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGC 72334 |||| | || ||| || | ||| || || ||||| | || ||||| | || | Sbjct 1104 TGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCAGCGCAC 1045 Query 72335 ATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTAGAAAAC 72394 | |||| || || || ||||| ||||| || |||||| ||| | | |||| Sbjct 1044 ACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCAAGAAAC 985 Query 72395 AGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAA 72454 || ||||| |||| | || || || || || ||||||||||||||||| || | Sbjct 984 AGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGTGAGTGA 925 Query 72455 ACCATTTTTCAGACAGTAGATTGTACGTCTCAATAGCTGATTCTATATCCCATTGATGTA 72514 | || | | ||||| | ||||| ||||| || || || || || || | Sbjct 924 AGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGCCGTGAA 865 Query 72515 TTCCTACCGCGACACGCATTAACATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTT 72574 | || || ||||| | ||| | || ||||| |||||||| | |||||| || | | Sbjct 864 TACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCATCCAATC 805 Query 72575 TCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGTCTCGTT 72634 |||| | ||||||| | || | || || || || || || ||||| ||||| || | Sbjct 804 TCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAATTGTAGTTGAAGTCACGGT 745 Query 72635 CGTA 72638 |||| Sbjct 744 CGTA 741 >seq183 Length=27355 Score = 172 bits (190), Expect = 7e-38 Identities = 400/598 (67%), Gaps = 10/598 (2%) Strand=Plus/Minus Query 42056 AACATCAAACATGCGAAATCGCAGTGCAGACCCTCATCTCTACTAATTAATTCGTTGGAA 42115 |||| ||| || || || ||| ||||| ||||| || | || || || ||||| || Sbjct 26520 AACAACAAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAG 26461 Query 42116 AACGTGAGTCCGGGCATTAGGCCACGCTTTTTAAGCCAAAATATAGACGCAAATGATCCA 42175 ||||| | |||||||| || || ||||| || | ||| || || |||||||| || || Sbjct 26460 AACGTCAAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCC 26401 Query 42176 GAAAAGAAGATTCCTTCTACTGCCGCAAAGGCAATAAGTCTCTCTCCATAACCGGCAC-- 42233 || ||||| || || || || || ||||| || | | | ||| ||| | ||| Sbjct 26400 GAGAAGAAAATCCCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCC 26341 Query 42234 -TGTCATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCT 42292 |||| | ||||| | | ||||| |||||||||| || | || || || | || Sbjct 26340 TTGTCGTTGATCCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGATGTTATCG 26281 Query 42293 ATGGCATTAAAGAGATAGtttttttCATTACTATCTTTAACATATGTATCGATCAAAAGA 42352 || || || ||||| || | || || || ||| || || || || |||||||| | | Sbjct 26280 ATCGCGTTGAAGAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACA-A 26222 Query 42353 CTA-TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGC 42411 | | ||| | || || || ||||| || || ||||| || ||||||||||| | || Sbjct 26221 CGAGTACGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAACACTTTGC 26162 Query 42412 CTCGGTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTC 42471 ||| | ||||| || |||| | || || | || || |||||||| || ||||| Sbjct 26161 CTCCGGCACCTGCACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCGTC 26102 Query 42472 ACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCGGTGTTAA--- 42528 || ||||| |||||||| || || || ||| | |||| | ||| | Sbjct 26101 CGAAGCGGCAAAGAACGCCAACACTCTCGAGATGAAGTATCTCTCGT-TGTCGTTCAACC 26043 Query 42529 -TTTATTCCAATCATTGATATCTTTAGATATATCTACTTCTTCTACCGTCCAAAATGATG 42587 | ||||| || | | || || || | ||| | || || | |||||||| || | Sbjct 26042 TCTCGTTCCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAAAAAGAGG 25983 Query 42588 CTTCTGCCTTTTTATACATATTCCAGATATCATGATATTGAATTGGGAAAATAACAAA 42645 | |||||||| || ||||| | ||| || || || || | || ||||||| ||||| Sbjct 25982 CCTCTGCCTTCTTGTACATCTGCCATATCTCGTGGTACTTGATCGGGAAAAGCACAAA 25925 >seq30 Length=26055 Score = 131 bits (144), Expect = 2e-25 Identities = 309/462 (67%), Gaps = 15/462 (3%) Strand=Plus/Plus Query 70794 GTCCAATGTAAACTGAATGGGAGAGGATGCGGCTTTCGTACGTAGATAGTACATGCCTGT 70853 |||||| | |||||||| | || | || ||||| || |||| ||||||||| ||||| Sbjct 1851 GTCCAAACTGAACTGAATTGCTGAAGCAGCAGCTTTGGTTCGTAAATAGTACATACCTGT 1910 Query 70854 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATC 70913 ||| || || |||| ||||||||||||| || || | ||| ||| || | ||| Sbjct 1911 TTTGAGTCCCTTCTTCCACGCGTAAAAATGCATGCTGGTCAATTTAGAAAAGGTGACATC 1970 Query 70914 GGCTATGTGAATATTCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCAT 70973 | | | |||||| || |||||| | || | | |||||||| ||||| Sbjct 1971 CTGCAAGAACAAATTCATACTTTGTGATTGATCAACAAATGGGGCTCTGTCTGCCGCCAT 2030 Query 70974 TTTTATGATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTT 71032 | ||| || ||| |||||| |||||||| | |||||||| ||| | || || || Sbjct 2031 ATCTATTATAGTCCTTTGTGATATTTCCCATACTGTTTTATACAACGC-TTTGATTTCAG 2089 Query 71033 CTGGAAGG---TTTGTATTCTGAATGGATCCACCATCTGCAATAATCCTATTTTTGATCT 71089 ||||| | ||| |||| |||||||| || ||| | | ||||| ||||||| || | Sbjct 2090 GTGGAATGGCTTTTATATTTTGAATGGACCCGTCATTTTCGATAATATTATTTTTCATAT 2149 Query 71090 CTTCATTCCAT-----AATTTTCTCTCGGTTAAAACTCTAAGGAGATGAGGATTAACTAC 71144 | | ||||| || ||| || | | | ||||| | | ||| ||||| Sbjct 2150 CAATACTCCATAAGCCAAGTTTAACTAAATCATCA-ACTAAGTATTT----ATTGACTAC 2204 Query 71145 TTGAAATTCTCCAGACAATACTCTACGAGTGTAAATATTACTGGTATACGGTTCCACTGA 71204 |||| |||||| || ||||||| ||| || ||||| ||| || || | | Sbjct 2205 TTGATGTTCTCCTGATAATACTCGACGGACATATATATTGGATGTAATAGGCTCAAAGCA 2264 Query 71205 CTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCAT 71246 ||||| || | |||||| | |||||||||||| ||||| Sbjct 2265 TTCATTGAAACCGAGAATTTGGGAAGTTGATGCAGTTGGCAT 2306 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 671134820816720