Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_004156.2 Length=231621 Score E Sequences producing significant alignments: (Bits) Value seq183 246 4e-60 seq95 120 5e-22 >seq183 Length=27355 Score = 246 bits (272), Expect = 4e-60 Identities = 591/882 (67%), Gaps = 28/882 (3%) Strand=Plus/Plus Query 124998 TTTCCC-ATCAGGTATCATGACATTTGGGAAATGTACAAAAAGGCTCAGGCCTCCTTTTG 125056 |||||| |||| ||| || || || ||| | |||||||| ||||| ||||||| ||||| Sbjct 25933 TTTCCCGATCAAGTACCACGAGATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTG 25992 Query 125057 GACGGTCGAAGAGGTCGATCTGTCCAAGGACCTGTACGATTGG---GAGACTCGTTTGAC 125113 ||| | ||| ||| ||||||| || ||||||||| |||| ||| |||| | |||| Sbjct 25993 GACCGCCGAGGAGATCGATCTCTCAAAGGACCTGCACGACTGGAACGAGA---GGTTGAA 26049 Query 125114 TGAAACTGAGCGAGAGTTTATATCGCACATTTTGGCCTTCTTTGCCGGCTCCGATGGAAT 125173 || | ||| || | || || ||| | ||||| |||||||||| || || || || Sbjct 26050 CGACAACGAGAGATACTTCATCTCGAGAGTGTTGGCGTTCTTTGCCGCTTCGGACGGGAT 26109 Query 125174 CGTCAACGACAATCTGTTGACACGATTCTCTCAAGAGTTGACCATTCCAGAGGTGTCGTG 125233 || ||||| || || || ||||| |||| || | || |||| ||| Sbjct 26110 TGTGAACGAGAACTTGGTGGAGAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTG 26169 Query 125234 CTTTTACGGATTCCAAATCATGATTGAGAACGTGCACTCGGAAATGTACTCTACACTGAT 125293 || ||||| ||||| |||||||| |||||| | |||||||| | |||||| |||| Sbjct 26170 TTTCTACGGTTTCCAGATCATGATGGAGAACATCCACTCGGAGACGTACTCGTTGTTGAT 26229 Query 125294 TGACATGTACATTCGCGATCCGCAACGTAAACACATGC-TCTTTAACGCAATCGACACGG 125352 |||| |||| | |||||| || | ||| | | |||| ||||| ||||| | Sbjct 26230 CGACACGTACGTGAAGGATCCG-AAGGAGAACGAGTACCTCTTCAACGCGATCGATAACA 26288 Query 125353 TGCCGTCTATACGTAAAAAGGCTCAATGGGTGATTCGGTGGATCGATGACGACAAGTCTT 125412 | |||| || | ||||| | |||| | | | |||||| | ||| | | | | Sbjct 26289 TCCCGTGCATCAAGGAGAAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGT 26348 Query 125413 CGTACGCCGACAGACTGGTGGCATTCGCCGCCGTAGAGGGCATCTTCTTTTCGGGTAGTT 125472 || | ||| | ||||||| || |||||||| ||||| || ||||| ||||| | Sbjct 26349 TGTTTGGCGAGCGCTTGGTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGT 26408 Query 125473 TTGCGGCCATCTTTTGGCTCAAGAAGCGCGGACTCATGCCCGGACTGACGCACAGTAACG 125532 ||||| | ||||| ||| | |||||||| || ||||||||||| ||||| | |||| Sbjct 26409 TTGCGTCGATCTTCTGGTTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACG 26468 Query 125533 AGTTTATATCTCGAGACGAGGGCCTACACTGTGACTTTGCCATTCTACTGTT-TCGCAAC 125591 |||| || | ||| ||||||||| | ||| ||||||||| | |||| ||||| | Sbjct 26469 AGTTGATCTGTCGGGACGAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTTCTCGCACC 26528 Query 125592 TATCTGCGTCCCGAGTGCAGATCCAGCGATGAAAAGGTCATCAACATTGTAACCGATGCC 125651 | | ||| | ||| |||| ||| ||| || | ||||| ||| Sbjct 26529 TGAATAACACCCCGGACGAGA-----CGAT-----TGTCCGCAAGATCATCACCGAGGCC 26578 Query 125652 GTGAGGATAGAACAAGAGTTTC-TAACCGAATCCCTACCGGTCAGCATGATTGGCATGAA 125710 || || | | ||| | | | | || || || | || |||| | || | |||||||| Sbjct 26579 GTTGATATCG-AGAAGCGCTACTTCACTGACGCCTTGCCCGTCAACTTGTTGGGCATGAA 26637 Query 125711 CTGCAAGCTAATGTGCGAGTACATAGAGTTTGTGGCAGATCGTCTACTGTACGAGTTGAT 125770 | | | |||||| ||||| | |||||||| || || || || ||| | | Sbjct 26638 CAAGGACTTGATGTGCCAGTACGTCGAGTTTGTCGCCGACCG-CT--TGTTTGTCGCCCT 26694 Query 125771 TGGCCG---CAAGATTTACAACGCCAAGAATCCCTTTGATTTCATGACCAGCATATCACT 125827 ||| | |||| ||||||| || || || || ||||||||| | ||| || || Sbjct 26695 CGGCTGCGACAAGCACTACAACGTCACCAACCCATTCGATTTCATGGAGAACATTTCGCT 26754 Query 125828 AGAGGGTAAGACCAACTTTTTCGAGAAGAAGGTCAGCGAGTA 125869 | || || |||||||| ||||||||| |||| ||| || Sbjct 26755 TGCCGGCAAAACCAACTTCTTCGAGAAGCGGGTCTCCGACTA 26796 >seq95 Length=34527 Score = 120 bits (132), Expect = 5e-22 Identities = 305/455 (67%), Gaps = 8/455 (2%) Strand=Plus/Plus Query 97774 ACGGTTTGAGAAACTCTTTGCTGGTGGCACCGATGCCCACGGCTACCACTTCCCAAGTGT 97833 |||| ||||||||||||||| |||| || || ||||| || ||| |||| || || | Sbjct 2113 ACGGGTTGAGAAACTCTTTGTTGGTTGCCCCAATGCCAACTGCTTCCACCTCGCAGATTC 2172 Query 97834 TTGGCAATGCTGAATCTTTTGAACCGTTCACGTCAAACATGTACCAGAGACGCACCCAGT 97893 |||| | |||| ||| || || | ||| || ||||| ||| ||| | | Sbjct 2173 TTGGTTACAACGAATGTTTCGAGCCATACACCTCGAACATCTACTCTAGAAGAGTTTTGG 2232 Query 97894 CTGGAGAGTTTCA-ATTGACCAACGTGCACTTGGTTCGAGACTTGGAACGGCTCAATCTG 97952 | || ||||| || |||| ||| || || | ||||||||| | | || Sbjct 2233 CCGGTGAGTTCCAGATTGTG-AACCCATACATGTTGAGAGACTTGGTGGAGATGGGACTA 2291 Query 97953 TGGAACGATGACATGGCCCAGTTGATCATGTACAACAATGGGTCCATTCAAAACATTACC 98012 |||||||| ||| | ||||| | | |||| || ||||| || ||| || | Sbjct 2292 TGGAACGACTCTATGAAGAACCACATCATCTCCGACAACGGTTCCATCCAGAACCTTCCA 2351 Query 98013 ATCATCCCGGAAGAGTTGCGCAGAATC-TACAAGACTGTCTGGGAGATTCCGACCAAGAC 98071 | |||||| | || | | || | || ||||| ||||||||||| || ||| | Sbjct 2352 AACATCCCACAGGAAAT-CAAGGACTTGTATAAGACCGTCTGGGAGATCCCACAGAAGGC 2410 Query 98072 GCTGATCGATATGGCTGCCGACAGAGGTGTCTACATTGACCAGAGTCAATCGTTCAATCT 98131 | | ||||| ||||| || |||||||||| ||||| |||||| ||| || | || | Sbjct 2411 GATCATCGACATGGCGGCTGACAGAGGTGCGTACATCGACCAGTCTCAGTCCATGAACAT 2470 Query 98132 GTACGTTGCCGAGCCCACCTACAGTC--GTATGACTTCGATACACTTTTACGCATGGAAC 98189 || ||| || |||| | | | | || |||| ||||| ||||| |||| ||||| Sbjct 2471 CCAC-TTGAAGAACCCAACCATGGGCAAGT-TGACCTCGATGCACTTCTACGGTTGGAAG 2528 Query 98190 AAGGGCCTCAAGACGGGCATGTACTATCTGAGAAC 98224 ||||| | ||||| || |||||||| || ||||| Sbjct 2529 AAGGGGTTGAAGACAGGTATGTACTACCTCAGAAC 2563 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 741054364588720