Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_005309.1 Length=359853 Score E Sequences producing significant alignments: (Bits) Value seq138 140 7e-28 seq97 129 1e-24 seq183 116 9e-21 seq468 105 2e-17 >seq138 Length=17849 Score = 140 bits (154), Expect = 7e-28 Identities = 155/207 (75%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 ||||| || |||||||| || || || ||||| || | ||||||||| ||||||| ||| Sbjct 9703 TGTAAGGTTGATTCTTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCTAATTGC 9644 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || || |||||||| || || || || ||||| || || ||||| ||||| || |||||| Sbjct 9643 TTACCGGCAAAAATAAGTCTTTGCTGGTCAGGTGGGATACCTTCCTTATCTTGGATCTTT 9584 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || ||||| || | || || || ||| || || | ||||| ||||||||||| Sbjct 9583 TGCTTGACATTATCGATAGTGTCAGAAGATTCGACTTCCAAGGTAATGGTCTTACCAGTT 9524 Query 104537 AGTGTTTTTACAAATATCTGCATTTTG 104563 | || || ||||| || ||||| ||| Sbjct 9523 AAGGTCTTGACAAAAATTTGCATCTTG 9497 >seq97 Length=66064 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || || || ||||| |||| ||||||||| ||||| | ||| Sbjct 5448 TGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGATAAAGTTCTACCATCTTCCAATTGC 5389 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATCTTT 104476 || ||||| || || | || || || ||||| || || ||||| || || || || ||| Sbjct 5388 TTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGGAATACCTTCCTTGTCTTGGATTTTT 5329 Query 104477 GCTTTTACATTTTCTACGGTATCGCTAGGTTCTACCTCTAGTGTAATAGTCTTACCAGTA 104536 || ||||| || | || ||| || || ||||| || |||||||||||||| ||| Sbjct 5328 TGCTTGACATTGTCAATAGTGTCGGAAGACTCAACCTCAAGGGTAATAGTCTTACCGGTA 5269 Query 104537 AGTGTTTTTACAAATATCTGCATTTT 104562 || ||||| || || || ||||| || Sbjct 5268 AGGGTTTTGACGAAAATTTGCATCTT 5243 >seq183 Length=27355 Score = 116 bits (128), Expect = 9e-21 Identities = 377/575 (66%), Gaps = 18/575 (3%) Strand=Plus/Plus Query 268730 GATATATGGAGGATGTACAAACAGGCCGTTGCTTCTTTTTGGACTGTAGAAGAAGTAGAT 268789 || |||||| ||||||||| |||| | || ||||||||||| | || || | ||| Sbjct 25952 GAGATATGGCAGATGTACAAGAAGGCAGAGGCCTCTTTTTGGACCGCCGAGGAGATCGAT 26011 Query 268790 CTGTCTTATGACTTAATAGATTGGAA--AAATTTAAAACCAGAA-GAAAGAAGATTTATA 268846 || || | ||| | || ||||| | | | ||| | || || ||| || || Sbjct 26012 CTCTCAAAGGACCTGCACGACTGGAACGAGAGGTTGAACGACAACGAGAGATACTTCATC 26071 Query 268847 TCTTATATTCTTG-CGTTTTTTGCAGTTAGTGATGGTATCGTTAACGAAAATCTAGTAGA 268905 || | | | ||| |||| ||||| | | || || || || ||||| || | || || Sbjct 26072 TCG-AGAGTGTTGGCGTTCTTTGCCGCTTCGGACGGGATTGTGAACGAGAACTTGGTGGA 26130 Query 268906 GAAGTTCTGTCAAGAGGTACAGATTCCTGAAGCCAGATGTTTTTACGGATTCCAGATAGC 268965 ||| |||| |||||| ||| | || || || | ||||| ||||| |||||||| Sbjct 26131 GAACTTCTCCGCAGAGGTGCAGGTGCCGGAGGCAAAGTGTTTCTACGGTTTCCAGATCAT 26190 Query 268966 TATAGAAAATATTCATTCAGAGATGTACAGTCTATTAATAGATACTTATATAGATGATAA 269025 || || || || || || |||| |||| | || || || || || | | ||| Sbjct 26191 GATGGAGAACATCCACTCGGAGACGTACTCGTTGTTGATCGACACGTACGTGAAGGATCC 26250 Query 269026 CAACGAAAAGAAAAGACTATTTTCTTCTATGAGAACTATGGACT---GTGTGAGaa--aa 269080 || || || || || | |||| | | || | || | ||| || | Sbjct 26251 GAAGGAGAAC----GAGTACCT-CTTCAACGCGATCGATAACATCCCGTGCATCAAGGAG 26305 Query 269081 aaaTCTGAATGGGCTCTGAAATGGATAAACGATAGCGC-GCCTTAC--GGAGAAAGGTTA 269137 || | || ||||| || | |||||| ||||| | | || || || || | || Sbjct 26306 AAGGCCGAGTGGGCGCTCAGATGGATCAACGACAAGGATGCGTTGTTTGGCGAGCGCTTG 26365 Query 269138 GTTGCTTTTGCCGCTGTAGAAGGTATATTCTTTTCGGGGTCTTTTGCCGCTATCTTTTGG 269197 || || |||||||| || || || || ||||| ||||| || ||||| | ||||| ||| Sbjct 26366 GTGGCGTTTGCCGCCGTGGAGGGGATTTTCTTCTCGGGCTCGTTTGCGTCGATCTTCTGG 26425 Query 269198 TTGAAGAAAAGAGGCCTTATGCCAGGATTAACTTTCTCTAACGAATTGATAAGCAGGGAC 269257 |||||||| | || || ||||| || || || ||||| ||||| ||||| | ||||| Sbjct 26426 TTGAAGAAGCGGGGGCTCATGCCCGGCTTGACGTTCTCGAACGAGTTGATCTGTCGGGAC 26485 Query 269258 GAAGGTTTACACTGCGACTTCGCTTGTTTATTATT 269292 || || || ||| |||||| || || || || || Sbjct 26486 GAGGGCTTGCACACCGACTTTGCCTGCTTGTTGTT 26520 >seq468 Length=160 Score = 105 bits (116), Expect = 2e-17 Identities = 99/125 (79%), Gaps = 1/125 (1%) Strand=Plus/Minus Query 104357 TGTAATGTAGATTCTTTCTGAATATTATAGTCAGATAGAGTTCTACCGTCTTCTAGTTGT 104416 || || || ||||| || || || || |||||||| | ||||| ||||||||||||||| Sbjct 134 TGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTTCCGTCTTCTAGTTGT 75 Query 104417 TTTCCAGCAAAAATTAGCCTCTGTTGATCAGGAGGTATTCCTTCTTTATCCTGAATC-TT 104475 || ||||| ||||| || ||||| || || || || || ||||| || ||||| ||| || Sbjct 74 TTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTGGAATACCTTCCTTGTCCTGGATCTTT 15 Query 104476 TGCTT 104480 ||||| Sbjct 14 TGCTT 10 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1151390699303576