Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_007767.1
Length=132959
Score E
Sequences producing significant alignments: (Bits) Value
seq138 145 6e-30
seq97 116 3e-21
seq468 87.8 2e-12
>seq138
Length=17849
Score = 145 bits (160), Expect = 6e-30
Identities = 170/230 (74%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||||||||| || | || || || ||||||||| | ||| || ||
Sbjct 9498 AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCT 9557
Query 115343 AGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGAT 115402
|||||| | | | || || ||||| || ||||| ||||| |||| |||
Sbjct 9558 TCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGAC 9617
Query 115403 CAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTAT 115462
|||||||||||||||| ||| || || ||||||||||||| | ||| || |||| ||
Sbjct 9618 CAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTAC 9677
Query 115463 AACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| |||||||| || || |||| |||| ||||||||| |||| ||
Sbjct 9678 AACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 9727
>seq97
Length=66064
Score = 116 bits (128), Expect = 3e-21
Identities = 166/231 (72%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 115283 AAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCC 115342
|| ||||||||||| |||||||| || || || || || |||||| | || |||||
Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302
Query 115343 AGCGACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGA 115401
||||||| || ||||| || || |||||||| || || ||||| | || |||
Sbjct 5303 TCCGACACTATT-GACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGA 5361
Query 115402 TCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTA 115461
||||||||| | || | || || || ||||| ||||||| | ||| | |||| ||
Sbjct 5362 CCAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTA 5421
Query 115462 TAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
||||| ||||| || || ||| | || |||| || |||||| |||| ||
Sbjct 5422 CAACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472
>seq468
Length=160
Score = 87.8 bits (96), Expect = 2e-12
Identities = 87/113 (77%), Gaps = 0/113 (0%)
Strand=Plus/Plus
Query 115400 GATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGAT 115459
|| ||||| |||||||||| || || |||||| ||||||| | | |||| || | ||
Sbjct 46 GACCAGCAGAGACTTATTTTCGCTGGTAAACAACTAGAAGACGGAAGAACCTTGTCTGAC 105
Query 115460 TATAACATTCAAAAAGAGTCTACTATACATATGGTGTTGAGATTGCGAGGAGG 115512
|| ||||| ||||| || || ||| | || |||||||||||||| |||| ||
Sbjct 106 TACAACATCCAAAAGGAATCGACTTTGCACTTGGTGTTGAGATTGAGAGGTGG 158
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 425341294014640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |