Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq208 140 2e-28
seq138 120 2e-22
seq97 102 5e-17
seq468 89.7 3e-13
>seq208
Length=5958
Score = 140 bits (154), Expect = 2e-28
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 4684 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGT 4625
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 4624 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 4590
Score = 98.7 bits (108), Expect = 7e-16
Identities = 68/77 (88%), Gaps = 0/77 (0%)
Strand=Plus/Minus
Query 19947 CTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGGTCTCGC 20006
|||||| |||||||| ||||||| |||||| |||| |||||||||||||||||||||| |
Sbjct 2747 CTCTCTTTTCAAAGTGCTTTTCATCTTTCCTTCACAGTACTTGTTCGCTATCGGTCTCTC 2688
Query 20007 GGTAATATTTAGCCTTA 20023
| | ||||||||||||
Sbjct 2687 GCCAGTATTTAGCCTTA 2671
>seq138
Length=17849
Score = 120 bits (132), Expect = 2e-22
Identities = 168/233 (72%), Gaps = 2/233 (1%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATG-AAGAGTGCTCTCCTTTTGAATATTGTAATCA 38147
||||||||||||| | ||| ||||| || ||| || | || ||||| || ||||| ||
Sbjct 9729 TACCACCTCTCAATCTCAAGACCAAGTGTAAGGTTGAT-TCTTTTTGGATGTTGTAGTCG 9671
Query 38148 GACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAG 38207
|||||| | | || |||||||| || |||||||| || || | ||| || || |
Sbjct 9670 GACAAAGTTCTACCATCTTCTAATTGCTTACCGGCAAAAATAAGTCTTTGCTGGTCAGGT 9611
Query 38208 GGGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCA 38267
|||| ||||| || || || |||||||| ||||| | || ||| || | |||
Sbjct 9610 GGGATACCTTCCTTATCTTGGATCTTTTGCTTGACATTATCGATAGTGTCAGAAGATTCG 9551
Query 38268 ACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
||||| || ||||| || ||||| || ||||| || || || || ||||| ||
Sbjct 9550 ACTTCCAAGGTAATGGTCTTACCAGTTAAGGTCTTGACAAAAATTTGCATCTT 9498
>seq97
Length=66064
Score = 102 bits (112), Expect = 5e-17
Identities = 161/231 (70%), Gaps = 0/231 (0%)
Strand=Plus/Minus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||||||||| | || ||||| || | |||| |||||||| || ||||| || ||
Sbjct 5473 ACCACCTCTCAATCTTAAGACCAAGTGCAAAGTGGATTCCTTTTGGATGTTGTAGTCGGA 5414
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
||| | | || || ||||| || || || || || | | ||| || || | ||
Sbjct 5413 TAAAGTTCTACCATCTTCCAATTGCTTACCAGCGAAGATCAATCTTTGCTGGTCAGGTGG 5354
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| ||||| ||||| ||||||||||| ||||| | | ||| || | |||||
Sbjct 5353 AATACCTTCCTTGTCTTGGATTTTTTGCTTGACATTGTCAATAGTGTCGGAAGACTCAAC 5294
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | |||||||| ||||| || | |||||| ||||| || ||||| ||
Sbjct 5293 CTCAAGGGTAATAGTCTTACCGGTAAGGGTTTTGACGAAAATTTGCATCTT 5243
>seq468
Length=160
Score = 89.7 bits (98), Expect = 3e-13
Identities = 114/157 (73%), Gaps = 0/157 (0%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||||||||| | ||||||||| || | ||| |||||||| || ||||| ||||
Sbjct 160 TACCACCTCTCAATCTCAACACCAAGTGCAAAGTCGATTCCTTTTGGATGTTGTAGTCAG 101
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
|||| | | |||| |||| |||||| || || || || || | || || || | |
Sbjct 100 ACAAGGTTCTTCCGTCTTCTAGTTGTTTACCAGCGAAAATAAGTCTCTGCTGGTCTGGTG 41
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATT 38245
| | ||||| |||||| || |||||||| || ||
Sbjct 40 GAATACCTTCCTTGTCCTGGATCTTTTGCTTGACGTT 4
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334945069107782
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |