Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq95 232 8e-56 seq30 127 3e-24 >seq95 Length=34527 Score = 232 bits (256), Expect = 8e-56 Identities = 1180/1870 (63%), Gaps = 47/1870 (3%) Strand=Plus/Minus Query 61849 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 61908 ||| ||||| |||| || | |||| || || | || |||||||| || || || | Sbjct 2594 TGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGTCTTCAA 2535 Query 61909 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTA 61967 || |||| ||||| || ||||| || | ||| || | || ||| | | Sbjct 2534 CCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTTCTTCAA 2475 Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027 ||||| ||||| || ||| || |||||| | || || ||||| || ||||| | | Sbjct 2474 G-TGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCGCCATGTCGA 2416 Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62086 | |||| ||| ||||| || ||||| | || ||||| || || ||| || || | ||| Sbjct 2415 TGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTC-CTTGATTTCCTGTGGG 2357 Query 62087 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62143 | ||||| | ||||| ||||| || || | || || ||||| || || Sbjct 2356 ATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCATAGAGTCG 2297 Query 62144 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 62203 ||||||| | |||| || |||| | | | || || || | || || || Sbjct 2296 TTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCTGGAACTCA 2237 Query 62204 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 62263 || | ||| ||||| | || ||| || || ||| || || || | | | || || | Sbjct 2236 CCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTAA 2177 Query 62264 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62323 || | ||| || | || || ||||| ||||| || || ||||| ||| ||||| | Sbjct 2176 CCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGTTTCTCAAC 2117 Query 62324 CCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAA 62381 |||| | |||||| || || || || | ||||| | ||| | || | || | | Sbjct 2116 CCGTGGGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTAGGCTTCTTA 2057 Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTA 62437 | || || | ||| | | |||| | | ||| |||| || Sbjct 2056 CCCCAGAGGTCGAAC--TGGAGCACACCTTGCGATGCTGGTGAGC---CCT-CATAGGTC 2003 Query 62438 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62497 ||||| || || ||||| || | || ||| || | |||| | | || || Sbjct 2002 TCGTAGGGACCCTCCTTGATTGCCAACTCGACGGACGCTTCAAGTGCAGCATGGTAGATT 1943 Query 62498 GTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG 62557 |||||||| || | | || | || | || || | || || || | | | Sbjct 1942 GTTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGCAGTCTGAGG 1883 Query 62558 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617 || || || ||||| || || ||||| ||||||| | | || ||||| | |||| | ||| Sbjct 1882 AGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTTCTCATGTTA 1823 Query 62618 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62677 || | || || |||| |||||| ||||| | ||| || ||||| || | || || Sbjct 1822 GATCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGTTCAAGTTCTTG 1763 Query 62678 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--------AA-----ATCGCCC 62724 ||| || ||| | | || | || ||| ||| | || |||| | Sbjct 1762 GCAACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGAAGTGTGATCGTCA 1703 Query 62725 ATCTATTACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62782 ||| ||||| || | ||| ||||| || |||| ||||| || || || |||| Sbjct 1702 CTCTCG-ACAAAGGCAGG--CAACGCAACCGAAGCCAAGTTACAGACAGCGACTTCAT-- 1648 Query 62783 GCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 62839 | | || | |||| | |||||| || | || | | ||||| | || || Sbjct 1647 -CGTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCCAAG 1589 Query 62840 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 62899 || ||||| || ||| ||||||| || ||||| || || ||||| |||||||| ||| Sbjct 1588 TTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCCGTT 1529 Query 62900 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 62959 ||| | || | ||| | |||| | ||| | | | ||||| || | ||| || Sbjct 1528 TCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGTC--TTTCTAC 1471 Query 62960 CTCT--TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63017 |||| |||||||||||||| |||||| | |||||||||||| || | || | | Sbjct 1470 CTCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGG 1411 Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 || || || ||| || | | | | ||| || | | || |||| | Sbjct 1410 ACAAGCCTGGGACCTCACTTGGGGAGAAAAGAGTCCATTCCTGATTCTGCTCAACTCTCT 1351 Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137 |||| || | ||||| ||||| | || || | ||||||| ||| ||| || | Sbjct 1350 TCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTGATTTCTTCCT 1291 Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197 | || |||||| | | |||| ||| | | ||||| || ||||| || || | | Sbjct 1290 TACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGAT 1231 Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257 | | || | | || || | |||||| || || || || | ||||| || ||||| | Sbjct 1230 AGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGT 1171 Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317 | |||| | || ||||||||| ||||| ||||| ||||| ||||| |||| || ||| Sbjct 1170 TGAAAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGG 1111 Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377 || |||| | || || || | ||| || || ||||| | || ||||| | Sbjct 1110 AGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCA 1051 Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437 || || |||| || || || ||||| ||||| || |||||| ||| | | Sbjct 1050 GCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCA 991 Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497 |||||| ||||| |||| | || || || || || |||||||||||||||| Sbjct 990 AGAAACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGT 931 Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63557 |||| || || | | ||| | | ||||| ||||| || || || || || Sbjct 930 GAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGC 871 Query 63558 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63617 ||||| || || ||||| | ||| | || |||||| |||||||| | |||||| | Sbjct 870 CGTGAATACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCAT 811 Query 63618 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63677 | | |||| | ||||||| | || | || || || || || || ||||| |||| Sbjct 810 CCAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAATTGTAGTTGAAGT 751 Query 63678 CTCGTTCGTA 63687 | || ||||| Sbjct 750 CACGGTCGTA 741 >seq30 Length=26055 Score = 127 bits (140), Expect = 3e-24 Identities = 907/1439 (63%), Gaps = 53/1439 (4%) Strand=Plus/Plus Query 61843 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 61902 |||||| |||| ||||| | | | || | ||| || |||| ||||||||| || || Sbjct 1851 GTCCAAACTGAACTGAATTGCTGAAGCAGCAGCTTTGGTTCGTAAATAGTACATACCTGT 1910 Query 61903 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGAT- 61961 ||| || || |||| ||||||||||||| || || | ||| ||| | | || Sbjct 1911 TTTGAGTCCCTTCTTCCACGCGTAAAAATGCATGCTGGTCAATTTAGAAAAGGTGACATC 1970 Query 61962 CTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 62021 |||| | | | ||||||| ||| |||||| | || | | |||||||| |||| Sbjct 1971 CTGCAAGA-ACAAATTCATACTTTGTGATTGATCAACAAATGGGGCTCTGTCTGCCGCCA 2029 Query 62022 TTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 62080 | | ||| || ||| |||||| |||||||| | |||||||| ||| | || || || Sbjct 2030 TATCTATTATAGTCCTTTGTGATATTTCCCATACTGTTTTATACAACGC-TTTGATTTCA 2088 Query 62081 TCTGGAAGG---TTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 62137 ||||| | ||| |||| |||||||| || ||| | | ||||| |||| || || Sbjct 2089 GGTGGAATGGCTTTTATATTTTGAATGGACCCGTCATTTTCGATAATATTATTTTTCATA 2148 Query 62138 TCATCATTCCAT-----AATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 62192 ||| | ||||| || ||| || | | | ||||| | | ||| |||| Sbjct 2149 TCAATACTCCATAAGCCAAGTTTAACTAAATCATCA-ACTAAGTATTT----ATTGACTA 2203 Query 62193 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAG 62252 ||||| |||||| || ||||||| || || ||||| ||| || || | Sbjct 2204 CTTGATGTTCTCCTGATAATACTCGACGGACATATATATTGGATGTAATAGGCTCAAAGC 2263 Query 62253 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAAC 62312 | ||||| || | |||||| | |||||||||||| ||||| || || | |||| Sbjct 2264 ATTCATTGAAACCGAGAATTTGGGAAGTTGATGCAGTTGGCATCAAGGCGACAAGTAAAG 2323 Query 62313 TATTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62371 ||||| | || | |||| | || | | | | | || | ||||| ||| | ||| Sbjct 2324 AGTTTCTCACGCCAAACTGTT-TTATGGTTTGTCTCAAAGTTGACCAATCCCATAAATCT 2382 Query 62372 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACC--GTTACTGGCGTACGATCCTA 62429 || |||| || ||| || | ||| || | | | || || Sbjct 2383 GAAGGTATTACTTTCCACATATCAAATTGAAGCAAACCTTGTGAAATGGG--AGACCCAT 2440 Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGC-------CTCTAAT 62482 | || | || || | ||||| ||| ||| | |||||| | || || Sbjct 2441 CGTAAG-AT----TGATACTTCC--CTCGGCTTTGTGCCAACTCACAGGATTGTTCCAAA 2493 Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTAT-C 62541 | | | ||||||||||| || || || | || || |||| || | |||| || | Sbjct 2494 GTTGCATGGTAAATGGTTTCAAATATTTTAATGTTGAGCTCTTTCGACT-CAGGAGATCC 2552 Query 62542 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601 ||| || | || | || || | || || | |||||||||||| | || || || Sbjct 2553 AAACGGCATACGCAACATAAAGAAAACATCAGCAAGTCCTTGAACACCTAAGCCTATGGG 2612 Query 62602 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62661 ||| | | || ||| || |||| | | || ||||| | || ||||| || || Sbjct 2613 TCTGTTTTTCAGATTCGATCTTTCGCAGTTTTCAAGTGGATACTTGTTGATATCAATGAT 2672 Query 62662 TTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG 62721 | ||| | ||| | | || || ||| | || | |||||| ||||||| ||| | Sbjct 2673 TCTATCCAAATTCCGGCAAACCACCTTGCATATTTCATGCAGTTTCAGAAAATTAAAACT 2732 Query 62722 CCCA-TCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62780 ||| ||| ||| | | | | || ||||| || || |||||||| ||| |||| Sbjct 2733 TCCATTCTCAACAAAAGAAGGT-AGCGCCACAGAAGCAAGGTTACAAACCGCTGTTTCAT 2791 Query 62781 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 62840 || ||||| | ||||| |||||||| | ||||| ||||| | Sbjct 2792 CTTTTGACGAATATTCAACGATCTCGCAACAAAGATTCGAGCTTTTGATTACGCCTAAGT 2851 Query 62841 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 62900 ||| ||||| | ||| ||||| ||| || || || | ||||| | ||||||| Sbjct 2852 TTTTCTGATTTGACAATTTATTACATTGATCTTTGTATAGTAAAAATGGGTTTCCAGTTT 2911 Query 62901 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 62960 | |||| | | | || || | ||| | ||| ||| || | | | ||||| Sbjct 2912 CTGTCTGTGCTGTCAGTATGGCATGCCACAATTCTCTAGCTTTGACTTTTTTCATGTATT 2971 Query 62961 TCTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT- 63017 || ||| |||| || || ||||| || ||| |||||| || || | ||| | Sbjct 2972 TCCCCTCTTTTTCATATTTATCGTATAGCAT-GTT-GAACTCATC-ACCGTATGATTCTG 3028 Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077 || || ||||||| ||| || | | || ||||||| || | |||| || || Sbjct 3029 TAAGACCGGGACATTTATCTGGTGAAAATAAACACCACTCCAAGT-TGCGTTCAATCTTT 3087 Query 63078 T-CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 63136 | |||||||||||| || ||||| || |||| || | |||| | ||| |||||| Sbjct 3088 TGCATAAAGAGATCGGGTATCCATAGCGCTAAGAACAAGCCTCTAGCTCTCATTTCCTCC 3147 Query 63137 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63196 || || || ||| | | ||| | || | | || ||| |||||| || || || Sbjct 3148 TTACCGTGGTTTTTTCTCAAATCCAAAAATTCGAAAACATCGCTATGCCAAGGCTCTAAA 3207 Query 63197 TATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63253 ||||| || || |||| |||| |||||| || || ||||| | ||| | |||||| Sbjct 3208 TATAT--ACAGAATGCTCCTGGCCTTTTGTTGCCGCCTTGATCGACATATTTGGCGGTG 3264 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 633627865551200