Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_008291.1
Length=198050
Score E
Sequences producing significant alignments: (Bits) Value
seq95 232 8e-56
seq30 127 3e-24
>seq95
Length=34527
Score = 232 bits (256), Expect = 8e-56
Identities = 1180/1870 (63%), Gaps = 47/1870 (3%)
Strand=Plus/Minus
Query 61849 TGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGTTTTTAG 61908
||| ||||| |||| || | |||| || || | || |||||||| || || || |
Sbjct 2594 TGTAAATTGGATGGCGGCAGCAGCGGCTTGGGTTCTGAGGTAGTACATACCTGTCTTCAA 2535
Query 61909 ACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGA-ATAACTCGGATCTGCTA 61967
|| |||| ||||| || ||||| || | ||| || | || ||| | |
Sbjct 2534 CCCCTTCTTCCAACCGTAGAAGTGCATCGAGGTCAACTTGCCCATGGTTGGGTTCTTCAA 2475
Query 61968 TATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTA 62027
||||| ||||| || ||| || |||||| | || || ||||| || ||||| | |
Sbjct 2474 G-TGGATGTTCATGGACTGAGACTGGTCGATGTACGCACCTCTGTCAGCCGCCATGTCGA 2416
Query 62028 TAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCTTCTGGA 62086
| |||| ||| ||||| || ||||| | || ||||| || || ||| || || | |||
Sbjct 2415 TGATCGCCTTCTGTGGGATCTCCCAGACGGTCTTATACAAGTC-CTTGATTTCCTGTGGG 2357
Query 62087 AGGTTTGTA---TTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATCTCATCA 62143
| ||||| | ||||| ||||| || || | || || ||||| || ||
Sbjct 2356 ATGTTTGGAAGGTTCTGGATGGAACCGTTGTCGGAGATGATGTGGTTCTTCATAGAGTCG 2297
Query 62144 TTCCATAATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTACTTGAAATTCT 62203
||||||| | |||| || |||| | | | || || || | || || ||
Sbjct 2296 TTCCATAGTCCCATCTCCACCAAGTCTCTCAACATGTATGGGTTCACAATCTGGAACTCA 2237
Query 62204 CCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAGACTCATTATTT 62263
|| | ||| ||||| | || ||| || || ||| || || || | | | || || |
Sbjct 2236 CCGGCCAAAACTCTTCTAGAGTAGATGTTCGAGGTGTATGGCTCGAAACATTCGTTGTAA 2177
Query 62264 CCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAACTATTTCTAAGA 62323
|| | ||| || | || || ||||| ||||| || || ||||| ||| ||||| |
Sbjct 2176 CCAAGAATCTGCGAGGTGGAAGCAGTTGGCATTGGGGCAACCAACAAAGAGTTTCTCAAC 2117
Query 62324 CCGTATGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCCGACGG--TACAA 62381
|||| | |||||| || || || || | ||||| | ||| | || | || | |
Sbjct 2116 CCGTGGGCTCTGATCTTCTCCTTCAGGGAATCCCAGTCCCATAAGTCGGTAGGCTTCTTA 2057
Query 62382 CNNNNNNNNNNNNNNNTTGTAGAATACCGT----TACTGGCGTACGATCCTACATATGTA 62437
| || || | ||| | | |||| | | ||| |||| ||
Sbjct 2056 CCCCAGAGGTCGAAC--TGGAGCACACCTTGCGATGCTGGTGAGC---CCT-CATAGGTC 2003
Query 62438 TCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGCCTCTAATGCACCGTAATAAATG 62497
||||| || || ||||| || | || ||| || | |||| | | || ||
Sbjct 2002 TCGTAGGGACCCTCCTTGATTGCCAACTCGACGGACGCTTCAAGTGCAGCATGGTAGATT 1943
Query 62498 GTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTATCAAATGGATAATTTAAG 62557
|||||||| || | | || | || | || || | || || || | | |
Sbjct 1942 GTTTCGAAAATTTGGATGTTCAACTCCTTTGCCTCTGGAGAGTCGAAAGGCAGTCTGAGG 1883
Query 62558 AGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGGTCTATGTCTCTTATTA 62617
|| || || ||||| || || ||||| ||||||| | | || ||||| | |||| | |||
Sbjct 1882 AGCATGAAAGCGTCGGCCAAACCTTGGACACCAACAGCAATCGGTCTGTTTCTCATGTTA 1823
Query 62618 GAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAATTTTATTGAGATTTCTG 62677
|| | || || |||| |||||| ||||| | ||| || ||||| || | || ||
Sbjct 1822 GATCTCCGTGCCTCCGGAACAGGATAGTAATTGACATCGATGATTTTGTTCAAGTTCTTG 1763
Query 62678 ACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATC--------AA-----ATCGCCC 62724
||| || ||| | | || | || ||| ||| | || |||| |
Sbjct 1762 GCAACAACCTTGGCGATCTCGTGCAATTTCTCAAAGTTGTACCAGGAAGTGTGATCGTCA 1703
Query 62725 ATCTATTACAAA--CATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCATTA 62782
||| ||||| || | ||| ||||| || |||| ||||| || || || ||||
Sbjct 1702 CTCTCG-ACAAAGGCAGG--CAACGCAACCGAAGCCAAGTTACAGACAGCGACTTCAT-- 1648
Query 62783 GCATCCGCA---TATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAA 62839
| | || | |||| | |||||| || | || | | ||||| | || ||
Sbjct 1647 -CGTTCGAAGAATATTCGACAATCTCACAACACAAGTTGGAAGATTTGATCATACCCAAG 1589
Query 62840 TTTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTT 62899
|| ||||| || ||| ||||||| || ||||| || || ||||| |||||||| |||
Sbjct 1588 TTCTGTTGGTTGGATTTTGTGTTACATGCGTCCTTGTAGAGCATGAAAGGAGTACCCGTT 1529
Query 62900 TCAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTAT 62959
||| | || | ||| | |||| | ||| | | | ||||| || | ||| ||
Sbjct 1528 TCAGTTTGGGCTTCCAAGATCGAGTACCACAACTTTTGTGCCTTGATGGTC--TTTCTAC 1471
Query 62960 CTCT--TTTCTCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT 63017
|||| |||||||||||||| |||||| | |||||||||||| || | || | |
Sbjct 1470 CTCTGTTTTCTCTTTCGTATTTTGTATATAGCTCTTCGAACTCGTCACCGTAGACGTCGG 1411
Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077
|| || || ||| || | | | | ||| || | | || |||| |
Sbjct 1410 ACAAGCCTGGGACCTCACTTGGGGAGAAAAGAGTCCATTCCTGATTCTGCTCAACTCTCT 1351
Query 63078 TCATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGT 63137
|||| || | ||||| ||||| | || || | ||||||| ||| ||| || |
Sbjct 1350 TCATGAACAAGTCAGGTATCCACAATGCAGGGAACAAGTCTCTGGCTCTGATTTCTTCCT 1291
Query 63138 TTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGT 63197
| || |||||| | | |||| ||| | | ||||| || ||||| || || | |
Sbjct 1290 TACCGTGGTTCTTTCTCACGTCGATGAAGTCGAAGATATCGGAGTGCCATGGCTCAAGAT 1231
Query 63198 ATATGGCCATAACTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTGTTAT 63257
| | || | | || || | |||||| || || || || | ||||| || ||||| |
Sbjct 1230 AGAGCGCAAAGGCACCTGGTCTTTTGTTACCACCTTGGTCGACATATCTGGCCGTGTTGT 1171
Query 63258 TATAAACTCTCAACATTGGAATAATACCATTGGATGTACCATTGGTCCCTGAGATATAGC 63317
| |||| | || ||||||||| ||||| ||||| ||||| ||||| |||| || |||
Sbjct 1170 TGAAAACACGCATCATTGGAATGATACCGTTGGAAGTACCGTTGGTACCTGCAATGTAGG 1111
Query 63318 TTCCACTGGCACGAATATTACTAATTGATAGACCTATTCCCCCTGCCATTTTAGAGATTA 63377
|| |||| | || || || | ||| || || ||||| | || ||||| |
Sbjct 1110 AGCCTGTGGCTCTGATGTTGTGGATGTGCAAACCAATACCACCTGCGGTCTTGGAGATCA 1051
Query 63378 ATGCGCATCGTTTTAACGTATCATAGATGCCCTCTATACTATCATCCATCATGTTAAGTA 63437
|| || |||| || || || ||||| ||||| || |||||| ||| | |
Sbjct 1050 GCGCACACTGTTTCAAAGTGTCGTAGATACCCTCAATCGAATCATCTTGCATTGCGACCA 991
Query 63438 GAAAACAGCTAGACATTTGGTGACGACTAGTTCCCGCATTAAATAAGGTAGGAGAAGCGT 63497
|||||| ||||| |||| | || || || || || ||||||||||||||||
Sbjct 990 AGAAACAGGAGGACATCTGGTTTCTTGGGGTACCTGCGTTGAACAAGGTAGGAGAAGCGT 931
Query 63498 GAGTAAACCATTTTTCAGAAAGTAGATTGTACGTCTCAATAGCTGAGTCTATATCCCATT 63557
|||| || || | | ||| | | ||||| ||||| || || || || ||
Sbjct 930 GAGTGAAGTATCTCTTAGACATCAAGTTGTAGGTCTCGATGGCGCTCTCAATGTCGTCGC 871
Query 63558 GATGAATTCCTACTGCGACACGCATTAACATGTGCTGAGGTCTTTCAACGATCTTGTTGT 63617
||||| || || ||||| | ||| | || |||||| |||||||| | |||||| |
Sbjct 870 CGTGAATACCGACAGCGACTCTCATGATCAAGTGCTGGGGTCTTTCCGCAATCTTGCCAT 811
Query 63618 TTATTTTCAACAAGTAGGATTTTTCCAAAGTTTTAAAACCAAAATAGTTGTATGAAAAGT 63677
| | |||| | ||||||| | || | || || || || || || ||||| ||||
Sbjct 810 CCAATCTCAAAAGGTAGGATCTCTCGAGGGTCTTGAAGCCGAAGTAATTGTAGTTGAAGT 751
Query 63678 CTCGTTCGTA 63687
| || |||||
Sbjct 750 CACGGTCGTA 741
>seq30
Length=26055
Score = 127 bits (140), Expect = 3e-24
Identities = 907/1439 (63%), Gaps = 53/1439 (4%)
Strand=Plus/Plus
Query 61843 GTCCAATGTGAATTGAATGGGAGCGGATGCGGGTTTCGTACGTAGATAGTACATTCCCGT 61902
|||||| |||| ||||| | | | || | ||| || |||| ||||||||| || ||
Sbjct 1851 GTCCAAACTGAACTGAATTGCTGAAGCAGCAGCTTTGGTTCGTAAATAGTACATACCTGT 1910
Query 61903 TTTTAGACCGAGACTCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAACTCGGAT- 61961
||| || || |||| ||||||||||||| || || | ||| ||| | | ||
Sbjct 1911 TTTGAGTCCCTTCTTCCACGCGTAAAAATGCATGCTGGTCAATTTAGAAAAGGTGACATC 1970
Query 61962 CTGCTATATGGATATTCATAGATTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCA 62021
|||| | | | ||||||| ||| |||||| | || | | |||||||| ||||
Sbjct 1971 CTGCAAGA-ACAAATTCATACTTTGTGATTGATCAACAAATGGGGCTCTGTCTGCCGCCA 2029
Query 62022 TTTTTATAATCGTCTTTTGTGGAATTTCCCAAATAGTTTTATA-AACTCGCTTAATATCT 62080
| | ||| || ||| |||||| |||||||| | |||||||| ||| | || || ||
Sbjct 2030 TATCTATTATAGTCCTTTGTGATATTTCCCATACTGTTTTATACAACGC-TTTGATTTCA 2088
Query 62081 TCTGGAAGG---TTTGTATTCTGAATGGATCCACCATCTGCCATAATCCTATTCTTGATC 62137
||||| | ||| |||| |||||||| || ||| | | ||||| |||| || ||
Sbjct 2089 GGTGGAATGGCTTTTATATTTTGAATGGACCCGTCATTTTCGATAATATTATTTTTCATA 2148
Query 62138 TCATCATTCCAT-----AATTTTCTCTCGGTTAAAACTCTAAGGAGATGCGGATTAACTA 62192
||| | ||||| || ||| || | | | ||||| | | ||| ||||
Sbjct 2149 TCAATACTCCATAAGCCAAGTTTAACTAAATCATCA-ACTAAGTATTT----ATTGACTA 2203
Query 62193 CTTGAAATTCTCCAGACAATACTCTCCGAGTGTAAATATTACTGGTATACGGTTCCACAG 62252
||||| |||||| || ||||||| || || ||||| ||| || || |
Sbjct 2204 CTTGATGTTCTCCTGATAATACTCGACGGACATATATATTGGATGTAATAGGCTCAAAGC 2263
Query 62253 ACTCATTATTTCCCAAAATTTGAGCAGTTGATGCAGTCGGCATAGGTGCCACCAATAAAC 62312
| ||||| || | |||||| | |||||||||||| ||||| || || | ||||
Sbjct 2264 ATTCATTGAAACCGAGAATTTGGGAAGTTGATGCAGTTGGCATCAAGGCGACAAGTAAAG 2323
Query 62313 TATTTCTAAGACCGTA-TGTTCTGATTTTATCTTTTAGAGGTTCCCAATTCCAAAGATCC 62371
||||| | || | |||| | || | | | | | || | ||||| ||| | |||
Sbjct 2324 AGTTTCTCACGCCAAACTGTT-TTATGGTTTGTCTCAAAGTTGACCAATCCCATAAATCT 2382
Query 62372 GACGGTACAACNNNNNNNNNNNNNNNTTGTAGAATACC--GTTACTGGCGTACGATCCTA 62429
|| |||| || ||| || | ||| || | | | || ||
Sbjct 2383 GAAGGTATTACTTTCCACATATCAAATTGAAGCAAACCTTGTGAAATGGG--AGACCCAT 2440
Query 62430 CATATGTATCGTATGGTCCTTCCTTCTCAGCTAGTTCACAACTCGC-------CTCTAAT 62482
| || | || || | ||||| ||| ||| | |||||| | || ||
Sbjct 2441 CGTAAG-AT----TGATACTTCC--CTCGGCTTTGTGCCAACTCACAGGATTGTTCCAAA 2493
Query 62483 GCACCGTAATAAATGGTTTCGAAGATCTTCTTATTTAGATCTTGCGCTTCCAGGCTAT-C 62541
| | | ||||||||||| || || || | || || |||| || | |||| || |
Sbjct 2494 GTTGCATGGTAAATGGTTTCAAATATTTTAATGTTGAGCTCTTTCGACT-CAGGAGATCC 2552
Query 62542 AAATGGATAATTTAAGAGAATAAACGCGTCTGCTAATCCTTGAACACCAATACCGATAGG 62601
||| || | || | || || | || || | |||||||||||| | || || ||
Sbjct 2553 AAACGGCATACGCAACATAAAGAAAACATCAGCAAGTCCTTGAACACCTAAGCCTATGGG 2612
Query 62602 TCTATGTCTCTTATTAGAGATTTCAGCTTCTGGAATAGGATAATAATTAATATCTATAAT 62661
||| | | || ||| || |||| | | || ||||| | || ||||| || ||
Sbjct 2613 TCTGTTTTTCAGATTCGATCTTTCGCAGTTTTCAAGTGGATACTTGTTGATATCAATGAT 2672
Query 62662 TTTATTGAGATTTCTGACAATTACTTTGACCACATCCTTCAGTTTGAGAAAATCAAATCG 62721
| ||| | ||| | | || || ||| | || | |||||| ||||||| ||| |
Sbjct 2673 TCTATCCAAATTCCGGCAAACCACCTTGCATATTTCATGCAGTTTCAGAAAATTAAAACT 2732
Query 62722 CCCA-TCTATTACAAACATGTTCAATGCAACAGATGCCAGATTACAAACGGCTACCTCAT 62780
||| ||| ||| | | | | || ||||| || || |||||||| ||| ||||
Sbjct 2733 TCCATTCTCAACAAAAGAAGGT-AGCGCCACAGAAGCAAGGTTACAAACCGCTGTTTCAT 2791
Query 62781 TAGCATCCGCATATTGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAAT 62840
|| ||||| | ||||| |||||||| | ||||| ||||| |
Sbjct 2792 CTTTTGACGAATATTCAACGATCTCGCAACAAAGATTCGAGCTTTTGATTACGCCTAAGT 2851
Query 62841 TTTGTTGATTACTCTTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTT 62900
||| ||||| | ||| ||||| ||| || || || | ||||| | |||||||
Sbjct 2852 TTTTCTGATTTGACAATTTATTACATTGATCTTTGTATAGTAAAAATGGGTTTCCAGTTT 2911
Query 62901 CAATCTGAGATTCTATAATCGCTTTCCAGACGACTCGAGCCTTTATTATAGATTTGTATC 62960
| |||| | | | || || | ||| | ||| ||| || | | | |||||
Sbjct 2912 CTGTCTGTGCTGTCAGTATGGCATGCCACAATTCTCTAGCTTTGACTTTTTTCATGTATT 2971
Query 62961 TCTTTTCTCTTTCGTA--TAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGT- 63017
|| ||| |||| || || ||||| || ||| |||||| || || | ||| |
Sbjct 2972 TCCCCTCTTTTTCATATTTATCGTATAGCAT-GTT-GAACTCATC-ACCGTATGATTCTG 3028
Query 63018 CCAGTCCAGGACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTT 63077
|| || ||||||| ||| || | | || ||||||| || | |||| || ||
Sbjct 3029 TAAGACCGGGACATTTATCTGGTGAAAATAAACACCACTCCAAGT-TGCGTTCAATCTTT 3087
Query 63078 T-CATAAAGAGATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCG 63136
| |||||||||||| || ||||| || |||| || | |||| | ||| ||||||
Sbjct 3088 TGCATAAAGAGATCGGGTATCCATAGCGCTAAGAACAAGCCTCTAGCTCTCATTTCCTCC 3147
Query 63137 TTTCCTGTATTCTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAG 63196
|| || || ||| | | ||| | || | | || ||| |||||| || || ||
Sbjct 3148 TTACCGTGGTTTTTTCTCAAATCCAAAAATTCGAAAACATCGCTATGCCAAGGCTCTAAA 3207
Query 63197 TATATGGCCATAA--CTCCAGGCCGTTTGTTTCCTCCCTGATCTATGTATCTAGCGGTG 63253
||||| || || |||| |||| |||||| || || ||||| | ||| | ||||||
Sbjct 3208 TATAT--ACAGAATGCTCCTGGCCTTTTGTTGCCGCCTTGATCGACATATTTGGCGGTG 3264
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 633627865551200
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