Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_008293.1
Length=135454
Score E
Sequences producing significant alignments: (Bits) Value
seq138 158 1e-33
seq97 123 2e-23
seq144 82.4 7e-11
>seq138
Length=17849
Score = 158 bits (174), Expect = 1e-33
Identities = 171/227 (75%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| ||||| ||||| || || ||||| |||| || | ||||| || || |||
Sbjct 9501 ATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTACCTTGGAAGTCGAATCTTCT 9560
Query 25059 GACACTATCGAGTCACTGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACCAA 25118
||||||||||| | |||||||| ||| || || ||||| || |||||||||||
Sbjct 9561 GACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGGAAGGTATCCCACCTGACCAG 9620
Query 25119 CAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACAAT 25178
|| | ||||||||||||| || ||||||||||||| | | ||| || ||| |||||
Sbjct 9621 CAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTAGAACTTTGTCCGACTACAAC 9680
Query 25179 ATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
|| ||||||||||| || |||| || || | || | ||||| ||
Sbjct 9681 ATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGAGAGGTGG 9727
>seq97
Length=66064
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || || || | |||||||| | || || | || || ||||| ||
Sbjct 5246 ATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCTTCC 5305
Query 25059 GACACTATCGAGTCACTG--AAGCAAAAAATCACTGACAAAGAAGGGATTCCACCTGACC 25116
|||||||| || || || |||||||||||| ||||| ||||| |||||||||||||
Sbjct 5306 GACACTATTGA--CAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGACC 5363
Query 25117 AACAGCGGATTATTTTTGCCGGCAAACAATTAGAAGATGATCGCACTGTGGGCGATTACA 25176
| || | | || || || || || ||||| ||||||| | | ||| | ||| ||||
Sbjct 5364 AGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTACA 5423
Query 25177 ATATTCAAAAAGAATCCACGCTACATTTAGTGCTAAGGCTAAGAGGAGG 25225
| || ||||| |||||||| | || || || |||| | ||||| ||
Sbjct 5424 ACATCCAAAAGGAATCCACTTTGCACTTGGTCTTAAGATTGAGAGGTGG 5472
>seq144
Length=18003
Score = 82.4 bits (90), Expect = 7e-11
Identities = 88/114 (77%), Gaps = 2/114 (2%)
Strand=Plus/Minus
Query 24999 ATGCAAATATTTGTAAAGACTTTGACCGGTAAATCCATCACAGTCGAAGTGGAGTCGTCT 25058
|||||||| || || ||||| ||||||||||| | || || | || || ||||| ||
Sbjct 114 ATGCAAATTTTCGTTAAGACATTGACCGGTAAGACTATTACCCTTGAGGTTGAGTCCTCA 55
Query 25059 GACACTATCGAGTCAC-TGAAGCAAAAAATCACTGACAAAGAAGGGATTCCACC 25111
||||| ||||| | || | |||||||| ||| ||||| ||||| ||||||||
Sbjct 54 GACACGATCGA-TAACGTCAAGCAAAAGATCCAGGACAAGGAAGGTATTCCACC 2
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 433325243221430
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |