Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq183 215 6e-51
seq196 91.5 2e-13
seq171 84.2 2e-11
>seq183
Length=27355
Score = 215 bits (238), Expect = 6e-51
Identities = 406/594 (68%), Gaps = 5/594 (1%)
Strand=Plus/Minus
Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148
||||| ||||||||||| || || || ||||| || | |||||||| || ||| ||
Sbjct 26514 AAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTC 26455
Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208
|| || || | || || || ||||| | ||| || || || ||||| || || ||
Sbjct 26454 AAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAG 26395
Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268
|| || || |||||||| ||||| ||||| | || ||| |||| || || |
Sbjct 26394 AAAATCCCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCG 26335
Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGC 93327
|||||||| | | ||||| ||||| || | ||| || || || | |||| ||||| ||
Sbjct 26334 TTGATCCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGA-TGTTATCGATCGC 26276
Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387
||| || ||||| || ||| | || ||| | ||| || ||||| |||| || ||
Sbjct 26275 GTTGAAGAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTA 26216
Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447
| | || || |||| |||||||| || ||||| ||||||||||| | || ||||
Sbjct 26215 CGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAACACTTTGCCTCCGG 26156
Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507
| |||||| ||| || || |||| || | || || || || || || || || ||
Sbjct 26155 CACCTGCACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGC 26096
Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATC--- 93564
||||| || ||||| | | || || | | |||| | || || | | | ||
Sbjct 26095 GGCAAAGAACGCCAACACTCTCGAGATGAAGTATCTCTCGTTGTCGTTCAACCTCTCGTT 26036
Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624
||| ||| || || ||||| ||||||| || ||| | |||||||| || || |||||
Sbjct 26035 CCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGC 25976
Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678
|| |||||||| | |||||| || || || | || || || | ||||| ||
Sbjct 25975 CTTCTTGTACATCTGCCATATCTCGTGGTACTTGATCGGGAAAAGCACAAACCG 25922
>seq196
Length=19223
Score = 91.5 bits (100), Expect = 2e-13
Identities = 82/102 (80%), Gaps = 6/102 (6%)
Strand=Plus/Minus
Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327
||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||||||
Sbjct 3526 CAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 3467
Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369
||||||||||||| ||| ||| |||||| |||||||||
Sbjct 3466 TTCGAACCCCACAGCTGTCAA--TATTAT----ATTTTTGTT 3431
>seq171
Length=76269
Score = 84.2 bits (92), Expect = 2e-11
Identities = 83/106 (78%), Gaps = 1/106 (1%)
Strand=Plus/Minus
Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324
|| ||| ||||||||||||||||||||| ||| || | | ||||| | |||| ||||
Sbjct 44618 AGGCAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGT 44559
Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTTG 126370
|||||||||||||||| ||| | | ||| | || || |||| |||
Sbjct 44558 GGGTTCGAACCCCACAGCTGTC-ATTTACTTTTTTAAATTTTATTG 44514
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556857166483280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |