Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq183 215 6e-51 seq196 91.5 2e-13 seq171 84.2 2e-11 >seq183 Length=27355 Score = 215 bits (238), Expect = 6e-51 Identities = 406/594 (68%), Gaps = 5/594 (1%) Strand=Plus/Minus Query 93089 AAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAACTCATTGCTGAATGTT 93148 ||||| ||||||||||| || || || ||||| || | |||||||| || ||| || Sbjct 26514 AAGCAGGCAAAGTCGGTGTGCAAGCCCTCGTCCCGACAGATCAACTCGTTCGAGAACGTC 26455 Query 93149 AAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCAAAACTACCAGaaaaa 93208 || || || | || || || ||||| | ||| || || || ||||| || || || Sbjct 26454 AAGCCGGGCATGAGCCCCCGCTTCTTCAACCAGAAGATCGACGCAAACGAGCCCGAGAAG 26395 Query 93209 aaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAATTTGCGGAATTACTG 93268 || || || |||||||| ||||| ||||| | || ||| |||| || || | Sbjct 26394 AAAATCCCCTCCACGGCGGCAAACGCCACCAAGCGCTCGCCAAACAACGCATCCTTGTCG 26335 Query 93269 CTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTT-TCGATAGC 93327 |||||||| | | ||||| ||||| || | ||| || || || | |||| ||||| || Sbjct 26334 TTGATCCATCTGAGCGCCCACTCGGCCTTCTCCTTGATGCACGGGA-TGTTATCGATCGC 26276 Query 93328 GTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATA 93387 ||| || ||||| || ||| | || ||| | ||| || ||||| |||| || || Sbjct 26275 GTTGAAGAGGTACTCGTTCTCCTTCGGATCCTTCACGTACGTGTCGATCAACAACGAGTA 26216 Query 93388 CATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGT 93447 | | || || |||| |||||||| || ||||| ||||||||||| | || |||| Sbjct 26215 CGTCTCCGAGTGGATGTTCTCCATCATGATCTGGAAACCGTAGAAACACTTTGCCTCCGG 26156 Query 93448 GATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGC 93507 | |||||| ||| || || |||| || | || || || || || || || || || Sbjct 26155 CACCTGCACCTCTGCGGAGAAGTTCTCCACCAAGTTCTCGTTCACAATCCCGTCCGAAGC 26096 Query 93508 TGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTTATC--- 93564 ||||| || ||||| | | || || | | |||| | || || | | | || Sbjct 26095 GGCAAAGAACGCCAACACTCTCGAGATGAAGTATCTCTCGTTGTCGTTCAACCTCTCGTT 26036 Query 93565 CCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTCTGC 93624 ||| ||| || || ||||| ||||||| || ||| | |||||||| || || ||||| Sbjct 26035 CCAGTCGTGCAGGTCCTTTGAGAGATCGATCTCCTCGGCGGTCCAAAAAGAGGCCTCTGC 25976 Query 93625 TTTTTTGTACATATCCCATATGTCTTGATATTGAATTGGAAATATGACAAAACG 93678 || |||||||| | |||||| || || || | || || || | ||||| || Sbjct 25975 CTTCTTGTACATCTGCCATATCTCGTGGTACTTGATCGGGAAAAGCACAAACCG 25922 >seq196 Length=19223 Score = 91.5 bits (100), Expect = 2e-13 Identities = 82/102 (80%), Gaps = 6/102 (6%) Strand=Plus/Minus Query 126268 CAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGTGGG 126327 ||| ||||||||||||||||||||| ||| || | | ||||| | |||| ||||||| Sbjct 3526 CAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGTGGG 3467 Query 126328 TTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTT 126369 ||||||||||||| ||| ||| |||||| ||||||||| Sbjct 3466 TTCGAACCCCACAGCTGTCAA--TATTAT----ATTTTTGTT 3431 >seq171 Length=76269 Score = 84.2 bits (92), Expect = 2e-11 Identities = 83/106 (78%), Gaps = 1/106 (1%) Strand=Plus/Minus Query 126265 AGTCAGGTTGGCCGAGTGGTCTAAGGCGCCAGATTTAAGATCTGGTTCCCTCGGGAGCGT 126324 || ||| ||||||||||||||||||||| ||| || | | ||||| | |||| |||| Sbjct 44618 AGGCAGTTTGGCCGAGTGGTCTAAGGCGTCAGGTTAAGGTCCTGGTCTCTTCGGAGGCGT 44559 Query 126325 GGGTTCGAACCCCACACCTGACAAATTATTATTGGAATTTTTGTTG 126370 |||||||||||||||| ||| | | ||| | || || |||| ||| Sbjct 44558 GGGTTCGAACCCCACAGCTGTC-ATTTACTTTTTTAAATTTTATTG 44514 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 556857166483280