Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12-
15] 522 sequences; 11,394,881 total letters
Query= NC_008520.2
Length=132239
Score E
Sequences producing significant alignments: (Bits) Value
seq138 105 6e-18
seq97 86.0 5e-12
>seq138
Length=17849
Score = 105 bits (116), Expect = 6e-18
Identities = 172/247 (70%), Gaps = 2/247 (1%)
Strand=Plus/Plus
Query 111167 TCATTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTA 111226
|| ||||| | ||| || ||||||||||||||||| || | || || || |||||||
Sbjct 9483 TCCTTTATTACAGTC--AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTA 9540
Query 111227 CCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAG 111286
|| ||||| ||| | || || | | | || || ||||| || || || |
Sbjct 9541 CCTTGGAAGTCGAATCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGG 9600
Query 111287 AAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTA 111346
|||| | || || || ||||| ||||||| ||| || || ||||| |||||| ||
Sbjct 9601 AAGGTATCCCACCTGACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTA 9660
Query 111347 AAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGC 111406
|||| || |||| || || || ||||||||||| || |||| || || ||| | ||
Sbjct 9661 GAACTTTGTCCGACTACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGA 9720
Query 111407 GCGGTGG 111413
| |||||
Sbjct 9721 GAGGTGG 9727
>seq97
Length=66064
Score = 86.0 bits (94), Expect = 5e-12
Identities = 139/200 (70%), Gaps = 0/200 (0%)
Strand=Plus/Plus
Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243
|| ||||||||||| |||||||| | ||||| || || |||||| | || || |
Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302
Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303
||| || ||| | | || || |||||||| ||||| ||||| |||| ||
Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362
Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363
|| ||||| | || | || || || |||||||||||| || |||| | |||| ||
Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422
Query 111364 AATATACAAAAAGAATCTAC 111383
|| || ||||| ||||| ||
Sbjct 5423 AACATCCAAAAGGAATCCAC 5442
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 423037308672400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |