Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pichia_20membranifaciens_20[genbank_20GCA_5F001950575.1_202016-12- 15] 522 sequences; 11,394,881 total letters Query= NC_008520.2 Length=132239 Score E Sequences producing significant alignments: (Bits) Value seq138 105 6e-18 seq97 86.0 5e-12 >seq138 Length=17849 Score = 105 bits (116), Expect = 6e-18 Identities = 172/247 (70%), Gaps = 2/247 (1%) Strand=Plus/Plus Query 111167 TCATTTATAAGAGTTTAAAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTA 111226 || ||||| | ||| || ||||||||||||||||| || | || || || ||||||| Sbjct 9483 TCCTTTATTACAGTC--AAGATGCAAATTTTTGTCAAGACCTTAACTGGTAAGACCATTA 9540 Query 111227 CCGTGGAAACGGAACCCAGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAG 111286 || ||||| ||| | || || | | | || || ||||| || || || | Sbjct 9541 CCTTGGAAGTCGAATCTTCTGACACTATCGATAATGTCAAGCAAAAGATCCAAGATAAGG 9600 Query 111287 AAGGCGTTCCCGTCGATCAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTA 111346 |||| | || || || ||||| ||||||| ||| || || ||||| |||||| || Sbjct 9601 AAGGTATCCCACCTGACCAGCAAAGACTTATTTTTGCCGGTAAGCAATTAGAAGATGGTA 9660 Query 111347 AAACTATGGCCGATTATAATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGC 111406 |||| || |||| || || || ||||||||||| || |||| || || ||| | || Sbjct 9661 GAACTTTGTCCGACTACAACATCCAAAAAGAATCAACCTTACACTTGGTCTTGAGATTGA 9720 Query 111407 GCGGTGG 111413 | ||||| Sbjct 9721 GAGGTGG 9727 >seq97 Length=66064 Score = 86.0 bits (94), Expect = 5e-12 Identities = 139/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 111184 AAAATGCAAATTTTTGTCAAAACGATGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111243 || ||||||||||| |||||||| | ||||| || || |||||| | || || | Sbjct 5243 AAGATGCAAATTTTCGTCAAAACCCTTACCGGTAAGACTATTACCCTTGAGGTTGAGTCT 5302 Query 111244 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111303 ||| || ||| | | || || |||||||| ||||| ||||| |||| || Sbjct 5303 TCCGACACTATTGACAATGTCAAGCAAAAAATCCAAGACAAGGAAGGTATTCCACCTGAC 5362 Query 111304 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111363 || ||||| | || | || || || |||||||||||| || |||| | |||| || Sbjct 5363 CAGCAAAGATTGATCTTCGCTGGTAAGCAATTGGAAGATGGTAGAACTTTATCCGACTAC 5422 Query 111364 AATATACAAAAAGAATCTAC 111383 || || ||||| ||||| || Sbjct 5423 AACATCCAAAAGGAATCCAC 5442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423037308672400